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  1. TI=Integration of symptomatic demographical and diet related comorbidities data with SARS CoV 2 antibody rapid diagnostic tests during epidemiological surveillance: a cross sectional study in Jakarta Indonesia
  2. TI=A Dynamic Jaw Model With a Finite Element Temporomandibular Joint
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  1. Article ; Online: Integration of symptomatic, demographical and diet-related comorbidities data with SARS-CoV-2 antibody rapid diagnostic tests during epidemiological surveillance: a cross-sectional study in Jakarta, Indonesia.

    Agustina, Rina / Syam, Ari Fahrial / Wirawan, Fadila / Widyahening, Indah S / Rahyussalim, Ahmad Jabir / Yusra, Yusra / Rianda, Davrina / Burhan, Erlina / Salama, Ngabila / Daulay, Rebekka / Halim, Ahmad Rhyza Vertando / Shankar, Anuraj H

    BMJ open

    2021  Volume 11, Issue 8, Page(s) e047763

    Abstract: ... We investigated if the integration of symptomatic, demographical and diet-related comorbidities data with antibody ... their utility for surveillance.: Design: We conducted a cross-sectional study using data from community ... surveillance for SARS-CoV-2. Health workers collected nasopharyngeal swabs for RT-PCR and RDT antigen ...

    Abstract Objectives: Affordable options for COVID-19 epidemiological surveillance are needed. Virus detection by reverse transcription-PCR (RT-PCR) is sensitive but costly, and antigen-based rapid diagnostic tests (RDTs) are cheap but with reduced sensitivity; both detect current infection but not exposure. RDT-IgM/IgG antibodies to SARS-CoV-2 detect exposure but have poor sensitivity for current infection. We investigated if the integration of symptomatic, demographical and diet-related comorbidities data with antibody RDTs improves their potential to assess infection rates in addition to exposure, thereby broadening their utility for surveillance.
    Design: We conducted a cross-sectional study using data from community surveillance for SARS-CoV-2. Health workers collected nasopharyngeal swabs for RT-PCR and RDT antigen assessments and venous blood for RDT-IgM/IgG from symptomatic and asymptomatic persons. Data on age, gender, contact history, symptoms (ie, fever, cough, runny nose, sore throat, headache, dyspnoea and diarrhoea), diet-related comorbidities (ie, diabetes and hypertension) and chest radiology were collected.
    Setting: High-risk communities in Jakarta, Indonesia, in May 2020.
    Participants: 343 community members' data were included.
    Outcome measures: RDT-IgM/IgG sensitivity, specificity and predictive values and area under receiver operating characteristic curve for RT-PCR positivity using RDT results alone and in combination with other predictors, including symptom components derived from principal component analysis.
    Results: There were 24 PCR-confirmed infections. RDT-IgM/IgG-positive tests were associated with infection (OR 10.8, 95% CI 4.43 to 26.4, p<0.001) with an area under the curve (AUC) of 0.708% and 50% sensitivity, 91.5% specificity, 30.8% positive predictive value (PPV) and 96.1% negative predictive value (NPV). RDT results combined with age, gender, contact history, symptoms and comorbidities increased the AUC to 0.787 and yielded 62.5% sensitivity, 87.0% specificity, 26.6% PPV and 96.9% NPV.
    Conclusions: SARS-CoV-2 RDT-IgM/IgG results integrated with other predictors may be an affordable tool for epidemiological surveillance for population-based COVID-19 exposure and current infection, especially in groups with outbreaks or high transmission.
    MeSH term(s) Antibodies, Viral ; COVID-19 ; Cross-Sectional Studies ; Diagnostic Tests, Routine ; Diet ; Humans ; Indonesia/epidemiology ; SARS-CoV-2 ; Sensitivity and Specificity
    Chemical Substances Antibodies, Viral
    Language English
    Publishing date 2021-08-10
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2599832-8
    ISSN 2044-6055 ; 2044-6055
    ISSN (online) 2044-6055
    ISSN 2044-6055
    DOI 10.1136/bmjopen-2020-047763
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Integration of symptomatic, demographical and diet-related comorbidities data with SARS-CoV-2 antibody rapid diagnostic tests during epidemiological surveillance

    Indah S Widyahening / Erlina Burhan / Anuraj H Shankar / Yusra Yusra / Ari Fahrial Syam / Rina Agustina / Fadila Wirawan / Ahmad Jabir Rahyussalim / Davrina Rianda / Ngabila Salama / Rebekka Daulay / Ahmad Rhyza Vertando Halim

    BMJ Open, Vol 11, Iss

    a cross-sectional study in Jakarta, Indonesia

    2021  Volume 8

    Abstract: ... of symptomatic, demographical and diet-related comorbidities data with antibody RDTs improves their potential ... We conducted a cross-sectional study using data from community surveillance for SARS-CoV-2. Health workers ... by reverse transcription-PCR (RT-PCR) is sensitive but costly, and antigen-based rapid diagnostic tests (RDTs) are cheap ...

    Abstract Objectives Affordable options for COVID-19 epidemiological surveillance are needed. Virus detection by reverse transcription-PCR (RT-PCR) is sensitive but costly, and antigen-based rapid diagnostic tests (RDTs) are cheap but with reduced sensitivity; both detect current infection but not exposure. RDT-IgM/IgG antibodies to SARS-CoV-2 detect exposure but have poor sensitivity for current infection. We investigated if the integration of symptomatic, demographical and diet-related comorbidities data with antibody RDTs improves their potential to assess infection rates in addition to exposure, thereby broadening their utility for surveillance.Design We conducted a cross-sectional study using data from community surveillance for SARS-CoV-2. Health workers collected nasopharyngeal swabs for RT-PCR and RDT antigen assessments and venous blood for RDT-IgM/IgG from symptomatic and asymptomatic persons. Data on age, gender, contact history, symptoms (ie, fever, cough, runny nose, sore throat, headache, dyspnoea and diarrhoea), diet-related comorbidities (ie, diabetes and hypertension) and chest radiology were collected.Setting High-risk communities in Jakarta, Indonesia, in May 2020.Participants 343 community members’ data were included.Outcome measures RDT-IgM/IgG sensitivity, specificity and predictive values and area under receiver operating characteristic curve for RT-PCR positivity using RDT results alone and in combination with other predictors, including symptom components derived from principal component analysis.Results There were 24 PCR-confirmed infections. RDT-IgM/IgG-positive tests were associated with infection (OR 10.8, 95% CI 4.43 to 26.4, p<0.001) with an area under the curve (AUC) of 0.708% and 50% sensitivity, 91.5% specificity, 30.8% positive predictive value (PPV) and 96.1% negative predictive value (NPV). RDT results combined with age, gender, contact history, symptoms and comorbidities increased the AUC to 0.787 and yielded 62.5% sensitivity, 87.0% specificity, 26.6% PPV and 96.9% NPV.Conclusions SARS-CoV-2 RDT-IgM/IgG results integrated with other predictors may be an affordable tool for epidemiological surveillance for population-based COVID-19 exposure and current infection, especially in groups with outbreaks or high transmission.
    Keywords Medicine ; R
    Subject code 150
    Language English
    Publishing date 2021-08-01T00:00:00Z
    Publisher BMJ Publishing Group
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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