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  1. Article ; Online: Importance of translational entropy of water in biological self-assembly processes like protein folding.

    Kinoshita, Masahiro

    International journal of molecular sciences

    2009  Volume 10, Issue 3, Page(s) 1064–1080

    Abstract: ... assembly processes such as protein folding, the number of accessible translational configurations ... We briefly review our studies on the folding/unfolding mechanisms of proteins. In biological self ... the pressure and cold denaturation. With the emphasis on the translational entropy of water, we are presently ...

    Abstract We briefly review our studies on the folding/unfolding mechanisms of proteins. In biological self-assembly processes such as protein folding, the number of accessible translational configurations of water in the system increases greatly, leading to a large gain in the water entropy. The usual view looking at only the water in the close vicinity of the protein surface is capable of elucidating neither the large entropic gain upon apoplastocyanin folding, which has recently been found in a novel experimental study, nor the pressure and cold denaturation. With the emphasis on the translational entropy of water, we are presently constructing a reliable method for predicting the native structure of a protein from its amino-acid sequence.
    MeSH term(s) Apoproteins/chemistry ; Apoproteins/metabolism ; Entropy ; Plastocyanin/chemistry ; Plastocyanin/metabolism ; Pressure ; Protein Denaturation ; Protein Folding ; Temperature ; Water/chemistry
    Chemical Substances Apoproteins ; apoplastocyanin ; Water (059QF0KO0R) ; Plastocyanin (9014-09-9)
    Language English
    Publishing date 2009-03-11
    Publishing country Switzerland
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Review
    ZDB-ID 2019364-6
    ISSN 1422-0067 ; 1422-0067 ; 1661-6596
    ISSN (online) 1422-0067
    ISSN 1422-0067 ; 1661-6596
    DOI 10.3390/ijms10031064
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Importance of Translational Entropy of Water in Biological Self-Assembly Processes like Protein Folding

    Masahiro Kinoshita

    International Journal of Molecular Sciences, Vol 10, Iss 3, Pp 1064-

    2009  Volume 1080

    Abstract: ... assembly processes such as protein folding, the number of accessible translational configurations ... We briefly review our studies on the folding/unfolding mechanisms of proteins. In biological self ... the pressure and cold denaturation. With the emphasis on the translational entropy of water, we are presently ...

    Abstract We briefly review our studies on the folding/unfolding mechanisms of proteins. In biological self-assembly processes such as protein folding, the number of accessible translational configurations of water in the system increases greatly, leading to a large gain in the water entropy. The usual view looking at only the water in the close vicinity of the protein surface is capable of elucidating neither the large entropic gain upon apoplastocyanin folding, which has recently been found in a novel experimental study, nor the pressure and cold denaturation. With the emphasis on the translational entropy of water, we are presently constructing a reliable method for predicting the native structure of a protein from its amino-acid sequence.
    Keywords Protein folding ; self-assembly ; water ; translational entropy ; pressure denaturation ; cold denaturation ; native structure ; Biology (General) ; QH301-705.5 ; Chemistry ; QD1-999
    Subject code 612
    Language English
    Publishing date 2009-03-01T00:00:00Z
    Publisher MDPI AG
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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