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  1. Article ; Online: Spatial heterogeneity can lead to substantial local variations in COVID-19 timing and severity.

    Thomas, Loring J / Huang, Peng / Yin, Fan / Luo, Xiaoshuang Iris / Almquist, Zack W / Hipp, John R / Butts, Carter T

    Proceedings of the National Academy of Sciences of the United States of America

    2020  Volume 117, Issue 39, Page(s) 24180–24187

    Abstract: ... on local pandemic timing and severity, even when aggregate behavior at larger scales mirrors a classic SIR ... for health care utilization, with substantial disparities in the timing and extremity of impacts even ... Standard epidemiological models for COVID-19 employ variants of compartment (SIR or susceptible ...

    Abstract Standard epidemiological models for COVID-19 employ variants of compartment (SIR or susceptible-infectious-recovered) models at local scales, implicitly assuming spatially uniform local mixing. Here, we examine the effect of employing more geographically detailed diffusion models based on known spatial features of interpersonal networks, most particularly the presence of a long-tailed but monotone decline in the probability of interaction with distance, on disease diffusion. Based on simulations of unrestricted COVID-19 diffusion in 19 US cities, we conclude that heterogeneity in population distribution can have large impacts on local pandemic timing and severity, even when aggregate behavior at larger scales mirrors a classic SIR-like pattern. Impacts observed include severe local outbreaks with long lag time relative to the aggregate infection curve, and the presence of numerous areas whose disease trajectories correlate poorly with those of neighboring areas. A simple catchment model for hospital demand illustrates potential implications for health care utilization, with substantial disparities in the timing and extremity of impacts even without distancing interventions. Likewise, analysis of social exposure to others who are morbid or deceased shows considerable variation in how the epidemic can appear to individuals on the ground, potentially affecting risk assessment and compliance with mitigation measures. These results demonstrate the potential for spatial network structure to generate highly nonuniform diffusion behavior even at the scale of cities, and suggest the importance of incorporating such structure when designing models to inform health care planning, predict community outcomes, or identify potential disparities.
    MeSH term(s) Betacoronavirus ; COVID-19 ; Cities/epidemiology ; Coronavirus Infections/epidemiology ; Coronavirus Infections/prevention & control ; Coronavirus Infections/transmission ; Delivery of Health Care ; Demography ; Health Status Disparities ; Humans ; Models, Statistical ; Pandemics/prevention & control ; Pneumonia, Viral/epidemiology ; Pneumonia, Viral/prevention & control ; Pneumonia, Viral/transmission ; SARS-CoV-2 ; Social Networking ; United States/epidemiology
    Keywords covid19
    Language English
    Publishing date 2020-09-10
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S.
    ZDB-ID 209104-5
    ISSN 1091-6490 ; 0027-8424
    ISSN (online) 1091-6490
    ISSN 0027-8424
    DOI 10.1073/pnas.2011656117
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Book ; Online: Spatial Heterogeneity Can Lead to Substantial Local Variations in COVID-19 Timing and Severity

    Thomas, Loring J. / Huang, Peng / Yin, Fan / Luo, Xiaoshuang Iris / Almquist, Zack W. / Hipp, John R. / Butts, Carter T.

    2020  

    Abstract: ... that heterogeneity in population distribution can have large impacts on local pandemic timing and severity, even when aggregate ... Standard epidemiological models for COVID-19 employ variants of compartment (SIR) models at local ... disparities in the timing and extremity of impacts even without distancing interventions. Likewise, analysis ...

    Abstract Standard epidemiological models for COVID-19 employ variants of compartment (SIR) models at local scales, implicitly assuming spatially uniform local mixing. Here, we examine the effect of employing more geographically detailed diffusion models based on known spatial features of interpersonal networks, most particularly the presence of a long-tailed but monotone decline in the probability of interaction with distance, on disease diffusion. Based on simulations of unrestricted COVID-19 diffusion in 19 U.S cities, we conclude that heterogeneity in population distribution can have large impacts on local pandemic timing and severity, even when aggregate behavior at larger scales mirrors a classic SIR-like pattern. Impacts observed include severe local outbreaks with long lag time relative to the aggregate infection curve, and the presence of numerous areas whose disease trajectories correlate poorly with those of neighboring areas. A simple catchment model for hospital demand illustrates potential implications for health care utilization, with substantial disparities in the timing and extremity of impacts even without distancing interventions. Likewise, analysis of social exposure to others who are morbid or deceased shows considerable variation in how the epidemic can appear to individuals on the ground, potentially affecting risk assessment and compliance with mitigation measures. These results demonstrate the potential for spatial network structure to generate highly non-uniform diffusion behavior even at the scale of cities, and suggest the importance of incorporating such structure when designing models to inform healthcare planning, predict community outcomes, or identify potential disparities.
    Keywords Physics - Physics and Society ; Computer Science - Social and Information Networks ; Quantitative Biology - Populations and Evolution ; covid19
    Publishing date 2020-05-20
    Publishing country us
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  3. Article: Spatial heterogeneity can lead to substantial local variations in COVID-19 timing and severity

    Thomas, Loring J / Huang, Peng / Yin, Fan / Luo, Xiaoshuang Iris / Almquist, Zack W / Hipp, John R / Butts, Carter T

    Proc Natl Acad Sci U S A

    Abstract: ... on local pandemic timing and severity, even when aggregate behavior at larger scales mirrors a classic SIR ... for health care utilization, with substantial disparities in the timing and extremity of impacts even ... Standard epidemiological models for COVID-19 employ variants of compartment (SIR or susceptible ...

    Abstract Standard epidemiological models for COVID-19 employ variants of compartment (SIR or susceptible-infectious-recovered) models at local scales, implicitly assuming spatially uniform local mixing. Here, we examine the effect of employing more geographically detailed diffusion models based on known spatial features of interpersonal networks, most particularly the presence of a long-tailed but monotone decline in the probability of interaction with distance, on disease diffusion. Based on simulations of unrestricted COVID-19 diffusion in 19 US cities, we conclude that heterogeneity in population distribution can have large impacts on local pandemic timing and severity, even when aggregate behavior at larger scales mirrors a classic SIR-like pattern. Impacts observed include severe local outbreaks with long lag time relative to the aggregate infection curve, and the presence of numerous areas whose disease trajectories correlate poorly with those of neighboring areas. A simple catchment model for hospital demand illustrates potential implications for health care utilization, with substantial disparities in the timing and extremity of impacts even without distancing interventions. Likewise, analysis of social exposure to others who are morbid or deceased shows considerable variation in how the epidemic can appear to individuals on the ground, potentially affecting risk assessment and compliance with mitigation measures. These results demonstrate the potential for spatial network structure to generate highly nonuniform diffusion behavior even at the scale of cities, and suggest the importance of incorporating such structure when designing models to inform health care planning, predict community outcomes, or identify potential disparities.
    Keywords covid19
    Publisher WHO
    Document type Article
    Note WHO #Covidence: #759658
    Database COVID19

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  4. Book ; Online: Replication Data for

    Loring J. Thomas / Peng Huang / Fan Yin / Xiaoshuang Iris Luo / Zack W. Almquist / John R. Hipp / Carter T. Butts

    Spatial Heterogeneity Can Lead to Substantial Local Variations in COVID-19 Timing and Severity

    Abstract: Replication data for Spatial Heterogeneity Can Lead to Substantial Local Variations in COVID-19 ... Timing and Severity. ...

    Abstract Replication data for Spatial Heterogeneity Can Lead to Substantial Local Variations in COVID-19 Timing and Severity.
    Keywords Medicine ; Health and Life Sciences ; Social Sciences ; covid19
    Publisher Harvard Dataverse
    Publishing country us
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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