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Article ; Online: Sex determination through X-Y heterogamety in Salix nigra.

Sanderson, Brian J / Feng, Guanqiao / Hu, Nan / Carlson, Craig H / Smart, Lawrence B / Keefover-Ring, Ken / Yin, Tongming / Ma, Tao / Liu, Jianquan / DiFazio, Stephen P / Olson, Matthew S

Heredity

2021 Volume 126, Issue 4, Page(s) 630–639

Abstract: ... on the X and autosomes. This discovery provides insights into factors that may influence the evolution ...

Abstract	The development of non-recombining sex chromosomes has radical effects on the evolution of discrete sexes and sexual dimorphism. Although dioecy is rare in plants, sex chromosomes have evolved repeatedly throughout the diversification of angiosperms, and many of these sex chromosomes are relatively young compared to those found in vertebrates. In this study, we designed and used a sequence capture array to identify a novel sex-linked region (SLR) in Salix nigra, a basal species in the willow clade, and demonstrated that this species has XY heterogamety. We did not detect any genetic overlap with the previously characterized ZW SLRs in willows, which map to a different chromosome. The S. nigra SLR is characterized by strong recombination suppression across a 2 MB region and an excess of low-frequency alleles, resulting in a low Tajima's D compared to the remainder of the genome. We speculate that either a recent bottleneck in population size or factors related to positive or background selection generated this differential pattern of Tajima's D on the X and autosomes. This discovery provides insights into factors that may influence the evolution of sex chromosomes in plants and contributes to a large number of recent observations that underscore their dynamic nature.
MeSH term(s)	Alleles ; Salix/genetics ; Sex Chromosomes/genetics ; Sex Determination Processes
Language	English
Publishing date	2021-01-28
Publishing country	England
Document type	Journal Article ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S.
ZDB-ID	2423-5
ISSN	1365-2540 ; 0018-067X
ISSN (online)	1365-2540
ISSN	0018-067X
DOI	10.1038/s41437-020-00397-3
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Article ; Online: High-level mosaicism for 45,X in 45,X/46,X,idic(Y)(q11.2) at amniocentesis in a pregnancy with a favorable outcome and postnatal progressive decrease of the 45,X cell line.

Chen, Chih-Ping / Chern, Schu-Rern / Chen, Shin-Wen / Wu, Fang-Tzu / Lee, Chen-Chi / Chen, Li-Feng / Chen, Yun-Yi / Wang, Wayseen

Taiwanese journal of obstetrics & gynecology

2022 Volume 61, Issue 3, Page(s) 528–531

Abstract: Objective: We present prenatal diagnosis of high-level mosaicism for 45,X in 45,X/46,X,idic(Y)(q11 ... 46,X,idic(Y)(q11.2)[4]. Prenatal ultrasound was unremarkable, and the fetus had normal male external ... revealed a karyotype of 45,X[24]/46,X,idic(Y)(q11.2)[3]. Simultaneous interphase fluorescence in situ ...

Abstract	Objective: We present prenatal diagnosis of high-level mosaicism for 45,X in 45,X/46,X,idic(Y)(q11.2) at amniocentesis in a pregnancy with a favorable outcome and postnatal progressive decrease of the 45,X cell line. Case report: A 36-year-old, gravida 4, para 3, woman underwent amniocentesis at 17 weeks of gestation because of advanced maternal age. Amniocentesis revealed a karyotype of 45,X[22]/46,X,idic(Y)(q11.2)[4]. Prenatal ultrasound was unremarkable, and the fetus had normal male external genitalia. Repeat amniocentesis was performed at 20 weeks of gestation, and the second amniocentesis revealed a karyotype of 45,X[24]/46,X,idic(Y)(q11.2)[3]. Simultaneous interphase fluorescence in situ hybridization (FISH) analysis on uncultured amniocytes revealed that 60% (62/103 cells) were Y-deleted cells. After genetic counseling, the parents decided to continue the pregnancy, and a 3020-g male baby was delivered with a body length of 52 cm, normal male genital organs and no phenotypic abnormalities. The karyotypes of cord blood, umbilical cord and placenta were 45,X[20]/46,X,idic(Y)(q11.2)[20], 45,X[31]/46,X,idic(Y)(q11.2)[9] and 45,X[40], respectively. At age one month, FISH analysis on urinary cells and buccal mucosal cells revealed 11.5% (7/61 cells) and 13.6% (16/118 cells), respectively for mosaicism for the Y-deleted cells. At age five month, the karyotype of peripheral blood was 45,X[9]/46,X,idic(Y)(q11.2)[31]. FISH analysis on buccal mucosal cells showed no abnormal Y-deleted cell (0/101 cells). At age 11 month, the karyotype of peripheral blood was 45,X[5]/46,X,idic(Y)(q11.2)[35]. FISH analysis on 102 buccal mucosal cells showed no abnormal signals. The infant was doing well with normal physical and psychomotor development. Conclusion: High-level mosaicism for 45,X in 45,X/46,X,idic(Y)(q11.2) at amniocentesis can be associated with a favorable outcome and progressive decrease of the 45,X cell line.
MeSH term(s)	Amniocentesis ; Cell Line ; Comparative Genomic Hybridization ; Female ; Humans ; In Situ Hybridization, Fluorescence ; Karyotype ; Male ; Mosaicism ; Pregnancy ; Trisomy
Language	English
Publishing date	2022-04-27
Publishing country	China (Republic : 1949- )
Document type	Case Reports
ZDB-ID	2202946-1
ISSN	1875-6263 ; 1875-6263
ISSN (online)	1875-6263
ISSN	1875-6263
DOI	10.1016/j.tjog.2022.03.024
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Book ; Online: The first- and second-order magneto-optical effects and intrinsically anomalous transport in 2D van der Waals layered magnets CrXY (X = S, Se, Te; Y = Cl, Br, I)

Yang, Xiuxian / Yang, Ping / Zhou, Xiaodong / Feng, Wanxiang / Yao, Yugui

2022

Abstract: ... effects) of two-dimensional van der Waals layered magnets CrXY (X = S, Se, Te; Y = Cl, Br, I) by using ... the first-principles calculations. Our results show that monolayer and bilayer CrXY (X = S, Se) are narrow ...

Abstract	Recently, the two-dimensional magnetic semiconductor CrSBr has attracted considerable attention due to its excellent air-stable property and high magnetic critical temperature. Here, we systematically investigate the electronic structure, magnetocrystalline anisotropy energy, first-order magneto-optical effects (Kerr and Faraday effects) and second-order magneto-optical effects (Schafer-Hubert and Voigt effects) as well as intrinsically anomalous transport properties (anomalous Hall, anomalous Nernst, and anomalous thermal Hall effects) of two-dimensional van der Waals layered magnets CrXY (X = S, Se, Te; Y = Cl, Br, I) by using the first-principles calculations. Our results show that monolayer and bilayer CrXY (X = S, Se) are narrow band gap semiconductors, whereas monolayer and bilayer CrTeY are multi-band metals. The magnetic ground states of bilayer CrXY and the easy magnetization axis of monolayer and bilayer CrXY are confirmed by the magnetocrystalline anisotropy energy calculations. Utilizing magnetic group theory analysis, the first-order magneto-optical effects as well as anomalous Hall, anomalous Nernst, and anomalous thermal Hall effects are identified to exist in ferromagnetic state with out-of-plane magnetization. The second-order magneto-optical effects are not restricted by the above symmetry requirements, and therefore can arise in ferromagnetic and antiferromagnetic states with in-plane magnetization. The calculated results are compared with the available theoretical and experimental data of other two-dimensional magnets and some conventional ferromagnets. The present work reveals that monolayer and bilayer CrXY with superior magneto-optical responses and anomalous transport properties provide an excellent material platform for the promising applications of magneto-optical devices, spintronics, and spin caloritronics. Comment: 19 pages, 12 figures
Keywords	Condensed Matter - Materials Science
Subject code	530
Publishing date	2022-04-20
Publishing country	us
Document type	Book ; Online
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Article ; Online: Corrigendum to "Zhang Y, Han X, Hu N, Huff AF, Gao F, Ren J. Akt2 knockout alleviates prolonged caloric restriction-induced change in cardiac contractile function through regulation of autophagy. [J Mol Cell Cardiol. 2014 Jun; 71:81-91. PMID: 24368095].

Zhang, Yingmei / Han, Xuefeng / Hu, Nan / Huff, Anna F / Gao, Feng / Ren, Jun

Journal of molecular and cellular cardiology

2021 Volume 163, Page(s) 190–191

Language	English
Publishing date	2021-12-06
Publishing country	England
Document type	Published Erratum
ZDB-ID	80157-4
ISSN	1095-8584 ; 0022-2828
ISSN (online)	1095-8584
ISSN	0022-2828
DOI	10.1016/j.yjmcc.2021.10.003
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Article ; Online: Anisotropic Rashba splitting in Pt-based Janus monolayers PtXY (X,Y = S, Se, or Te).

Sino, Paul Albert L / Feng, Liang-Ying / Villaos, Rovi Angelo B / Cruzado, Harvey N / Huang, Zhi-Quan / Hsu, Chia-Hsiu / Chuang, Feng-Chuan

Nanoscale advances

2021 Volume 3, Issue 23, Page(s) 6608–6616

Abstract: ... study of 2D Janus transition metal dichalcogenide (TMD) monolayers based on PtXY (X,Y = S, Se, or Te ...

Abstract	Recent studies have demonstrated the feasibility of synthesizing two-dimensional (2D) Janus materials which possess intrinsic structural asymmetry. Hence, we performed a systematic first-principles study of 2D Janus transition metal dichalcogenide (TMD) monolayers based on PtXY (X,Y = S, Se, or Te). Our calculated formation energies show that these monolayer Janus structures retain the 1T phase. Furthermore, phonon spectral calculations confirm that these Janus TMD monolayers are thermodynamically stable. We found that PtSSe, PtSTe, and PtSeTe exhibit an insulating phase with indirect band gaps of 2.108, 1.335, and 1.221 eV, respectively, from hybrid functional calculations. Due to the breaking of centrosymmetry in the crystal structure, the spin-orbit coupling (SOC)-induced anisotropic Rashba splitting is observed around the M point. The calculated Rashba strengths from M to Γ (
Language	English
Publishing date	2021-09-14
Publishing country	England
Document type	Journal Article
ISSN	2516-0230
ISSN (online)	2516-0230
DOI	10.1039/d1na00334h
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Book ; Online: XFe4Ge2 (X = Y, Lu) and Mn3Pt

Wang, Di / Tang, Feng / Po, Hoi Chun / Vishwanath, Ashvin / Wan, Xiangang

Filling-enforced magnetic topological metals

2019

Abstract: ... of XFe4Ge2 (X = Y, Lu) and Mn3Pt, and find these materials to be filling-enforced magnetic topological metals ... Our first-principles calculations show that XFe4Ge2 (X = Y, Lu) host Dirac points near the Fermi level ...

Abstract	Magnetism, coupled with nontrivial band topology, can bring about many interesting and exotic phenomena, so that magnetic topological materials have attracted persistent research interest. However, compared with non-magnetic topological materials (TMs), the magnetic TMs are less studied, since their magnetic structures and topological phase transitions are usually complex and the first-principles predictions are usually sensitive on the effect of Coulomb interaction. In this work, we present a comprehensive investigation of XFe4Ge2 (X = Y, Lu) and Mn3Pt, and find these materials to be filling-enforced magnetic topological metals. Our first-principles calculations show that XFe4Ge2 (X = Y, Lu) host Dirac points near the Fermi level at high symmetry point S. These Dirac points are protected by PT symmetry (P and T are inversion and time-reversal transformations, respectively) and a 2-fold screw rotation symmetry. Moreover, through breaking PT symmetry, the Dirac points would split into Weyl nodes. Mn3Pt is found to host 4-fold degenerate band crossings in the whole high symmetry path of A-Z. We also utilize the GGA+U scheme to take into account the effect of Coulomb repulsion and find that the filling-enforced topological properties are naturally insensitive on U.
Keywords	Condensed Matter - Mesoscale and Nanoscale Physics ; Condensed Matter - Materials Science
Subject code	539
Publishing date	2019-10-29
Publishing country	us
Document type	Book ; Online
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Article ; Online: Corrigendum to Zhang J, Cai J, Cui Y, Jiang S, Wei J, Kim YC, Chan J, Thalakola A, Le T, Xu L, Wang L, Jiang K, Wang X, Wang H, Cheng F, Buggs J, Koepsell H, Vallon V, Liu R. "Role of the macula densa sodium glucose cotransporter type 1-neuronal nitric oxide synthase-tubuloglomerular feedback pathway in diabetic hyperfiltration." Kidney Int. 2022;101:541-550.

Zhang, Jie / Cai, Jing / Cui, Yu / Jiang, Shan / Wei, Jin / Kim, Young Chul / Chan, Jenna / Thalakola, Anish / Le, Thanh / Xu, Lan / Wang, Lei / Jiang, Kun / Wang, Ximing / Wang, Haibo / Cheng, Feng / Buggs, Jacentha / Koepsell, Hermann / Vallon, Volker / Liu, Ruisheng

Kidney international

2022 Volume 102, Issue 2, Page(s) 448

Language	English
Publishing date	2022-07-20
Publishing country	United States
Document type	Published Erratum
ZDB-ID	120573-0
ISSN	1523-1755 ; 0085-2538
ISSN (online)	1523-1755
ISSN	0085-2538
DOI	10.1016/j.kint.2022.05.011
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Zs.A 797: Show issues

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Article ; Online: Droop-free AlxGa1-xN/AlyGa1-yN quantum-disks-in-nanowires ultraviolet LED emitting at 337 nm on metal/silicon substrates.

Janjua, Bilal / Sun, Haiding / Zhao, Chao / Anjum, Dalaver H / Priante, Davide / Alhamoud, Abdullah A / Wu, Feng / Li, Xiaohang / Albadri, Abdulrahman M / Alyamani, Ahmed Y / El-Desouki, Munir M / Ng, Tien Khee / Ooi, Boon S

Optics express

2017 Volume 25, Issue 2, Page(s) 1381–1390

Abstract: Currently the AlGaN-based ultraviolet (UV) solid-state lighting research suffers from numerous challenges. In particular, low internal quantum efficiency, low extraction efficiency, inefficient doping, large polarization fields, and high dislocation ... ...

Abstract	Currently the AlGaN-based ultraviolet (UV) solid-state lighting research suffers from numerous challenges. In particular, low internal quantum efficiency, low extraction efficiency, inefficient doping, large polarization fields, and high dislocation density epitaxy constitute bottlenecks in realizing high power devices. Despite the clear advantage of quantum-confinement nanostructure, it has not been widely utilized in AlGaN-based nanowires. Here we utilize the self-assembled nanowires (NWs) with embedding quantum-disks (Qdisks) to mitigate these issues, and achieve UV emission of 337 nm at 32 A/cm<sup>2</sup> (80 mA in 0.5 × 0.5 mm<sup>2</sup> device), a turn-on voltage of ~5.5 V and droop-free behavior up to 120 A/cm<sup>2</sup> of injection current. The device was grown on a titanium-coated n-type silicon substrate, to improve current injection and heat dissipation. A narrow linewidth of 11.7 nm in the electroluminescence spectrum and a strong wavefunctions overlap factor of 42% confirm strong quantum confinement within uniformly formed AlGaN/AlGaN Qdisks, verified using transmission electron microscopy (TEM). The nitride-based UV nanowires light-emitting diodes (NWs-LEDs) grown on low cost and scalable metal/silicon template substrate, offers a scalable, environment friendly and low cost solution for numerous applications, such as solid-state lighting, spectroscopy, medical science and security.
Language	English
Publishing date	2017-01-23
Publishing country	United States
Document type	Journal Article
ZDB-ID	1491859-6
ISSN	1094-4087 ; 1094-4087
ISSN (online)	1094-4087
ISSN	1094-4087
DOI	10.1364/OE.25.001381
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Article ; Online: Erratum: Liu, Y.-Z.; Jiang, X.-K.; Cao, W.-F.; Sun, J.-Y.; Gao, F. Detection of Thrombin Based on Fluorescence Energy Transfer between Semiconducting Polymer Dots and BHQ-Labelled Aptamers. Sensors 2018, 18, 589.

Liu, Yizhang / Jiang, Xuekai / Cao, Wenfeng / Sun, Junyong / Gao, Feng

Sensors (Basel, Switzerland)

2018 Volume 18, Issue 12

Abstract: The authors wish to make the following corrections to their paper [ ... ]. ...

Abstract	The authors wish to make the following corrections to their paper [...].
Language	English
Publishing date	2018-12-05
Publishing country	Switzerland
Document type	Journal Article ; Published Erratum
ZDB-ID	2052857-7
ISSN	1424-8220 ; 1424-8220
ISSN (online)	1424-8220
ISSN	1424-8220
DOI	10.3390/s18124289
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Article ; Online: Meat species identification accuracy improvement using sample set portioning based on joint x-y distance and laser-induced breakdown spectroscopy.

Guo, Lianbo / Zheng, Weinan / Chen, Feng / Wang, Weiliang / Zhang, Deng / Hu, Zhenlin / Chu, Yanwu

Applied optics

2021 Volume 60, Issue 20, Page(s) 5826–5831

Abstract: ... the development of LIBS in meat detection. Sample set portioning based on the joint x-y distance (SPXY) method was ...

Abstract	Laser-induced breakdown spectroscopy (LIBS) was suitable for the identification of meat species due to fast and less sample preparation. However, the problem of low accuracy rate of the recognition model caused by improper selection of training set samples by random split has severely restricted the development of LIBS in meat detection. Sample set portioning based on the joint x-y distance (SPXY) method was applied for dividing the meat spectra into a training set and a test set. Then, the five kinds of meat samples (shrimp, chicken, beef, scallop, and pig liver) were classified by the support vector machine (SVM). With the random split method, Kennard-Stone method, and SPXY method, the recognition accuracies of the SVM model were 90.44%, 91.95%, and 94.35%, respectively. The multidimensional scaling method was used to visualize the results of the sample split for the interpretation of the classification. The results showed that the identification performance of the SPXY method combined with the SVM model was best, and the accuracy rates of shrimp, chicken, beef, scallop, and pig liver were 100.00%, 100.00%, 100.00%, 78.57%, and 92.00%, respectively. Moreover, to verify the broad adaptability of the SPXY method, the linear discriminant analysis model, the K-nearest neighbor model, and the ensemble learning model were applied as the meat species identification model. The results demonstrated that the accuracy rate of the classification model can be improved with the SPXY method. In light of the findings, the proposed sample portioning method can improve the accuracy rate of the recognition model using LIBS.
Language	English
Publishing date	2021-07-15
Publishing country	United States
Document type	Journal Article
ISSN	1539-4522
ISSN (online)	1539-4522
DOI	10.1364/AO.430980
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