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  1. Article ; Online: AMPK Inhibits ULK1-Dependent Autophagosome Formation and Lysosomal Acidification via Distinct Mechanisms.

    Nwadike, Chinwendu / Williamson, Leon E / Gallagher, Laura E / Guan, Jun-Lin / Chan, Edmond Y W

    Molecular and cellular biology

    2018  Volume 38, Issue 10

    Abstract: Autophagy maintains metabolism in response to starvation, but each nutrient is sensed distinctly. Amino acid deficiency suppresses mechanistic target of rapamycin complex 1 (MTORC1), while glucose deficiency promotes AMP-activated protein kinase (AMPK). ... ...

    Abstract Autophagy maintains metabolism in response to starvation, but each nutrient is sensed distinctly. Amino acid deficiency suppresses mechanistic target of rapamycin complex 1 (MTORC1), while glucose deficiency promotes AMP-activated protein kinase (AMPK). The MTORC1 and AMPK signaling pathways converge onto the ULK1/2 autophagy initiation complex. Here, we show that amino acid starvation promoted formation of ULK1- and sequestosome 1/p62-positive early autophagosomes. Autophagosome initiation was controlled by MTORC1 sensing glutamine, leucine, and arginine levels together. In contrast, glucose starvation promoted AMPK activity, phosphorylation of ULK1 Ser555, and LC3-II accumulation, but with dynamics consistent with a block in autophagy flux. We studied the flux pathway and found that starvation of amino acid but not of glucose activated lysosomal acidification, which occurred independently of autophagy and ULK1. In addition to lack of activation, glucose starvation inhibited the ability of amino acid starvation to activate both autophagosome formation and the lysosome. Activation of AMPK and phosphorylation of ULK1 were determined to specifically inhibit autophagosome formation. AMPK activation also was sufficient to prevent lysosome acidification. These results indicate concerted but distinct AMPK-dependent mechanisms to suppress early and late phases of autophagy.
    MeSH term(s) AMP-Activated Protein Kinases/metabolism ; Amino Acids/metabolism ; Animals ; Autophagosomes/enzymology ; Autophagosomes/metabolism ; Autophagy/physiology ; Autophagy-Related Protein-1 Homolog/metabolism ; Cell Line, Tumor ; Glucose/deficiency ; Glucose/metabolism ; HEK293 Cells ; HeLa Cells ; Humans ; Intracellular Signaling Peptides and Proteins/metabolism ; Lysosomes/metabolism ; Lysosomes/physiology ; Mechanistic Target of Rapamycin Complex 1/metabolism ; Mice ; Phosphorylation ; Protein-Serine-Threonine Kinases/metabolism ; Signal Transduction ; Starvation/metabolism ; TOR Serine-Threonine Kinases/metabolism
    Chemical Substances Amino Acids ; Intracellular Signaling Peptides and Proteins ; TOR Serine-Threonine Kinases (EC 2.7.1.1) ; Autophagy-Related Protein-1 Homolog (EC 2.7.11.1) ; Mechanistic Target of Rapamycin Complex 1 (EC 2.7.11.1) ; Protein-Serine-Threonine Kinases (EC 2.7.11.1) ; ULK1 protein, human (EC 2.7.11.1) ; Ulk2 protein, human (EC 2.7.11.1) ; AMP-Activated Protein Kinases (EC 2.7.11.31) ; Glucose (IY9XDZ35W2)
    Language English
    Publishing date 2018-04-30
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 779397-2
    ISSN 1098-5549 ; 0270-7306
    ISSN (online) 1098-5549
    ISSN 0270-7306
    DOI 10.1128/MCB.00023-18
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: AMPK Inhibits ULK1-Dependent Autophagosome Formation and Lysosomal Acidification via Distinct Mechanisms

    Nwadike, Chinwendu / Williamson, Leon E. / Gallagher, Laura E. / Guan, Jun-Lin / Chan, Edmond Y. W.

    Molecular and Cellular Biology. 2018 May 1, v. 38, no. 10 p.e00023-18-

    2018  

    Abstract: Autophagy maintains metabolism in response to starvation, but each nutrient is sensed distinctly. Amino acid deficiency suppresses mechanistic target of rapamycin complex 1 (MTORC1), while glucose deficiency promotes AMP-activated protein kinase (AMPK). ... ...

    Abstract Autophagy maintains metabolism in response to starvation, but each nutrient is sensed distinctly. Amino acid deficiency suppresses mechanistic target of rapamycin complex 1 (MTORC1), while glucose deficiency promotes AMP-activated protein kinase (AMPK). The MTORC1 and AMPK signaling pathways converge onto the ULK1/2 autophagy initiation complex. Here, we show that amino acid starvation promoted formation of ULK1- and sequestosome 1/p62-positive early autophagosomes. Autophagosome initiation was controlled by MTORC1 sensing glutamine, leucine, and arginine levels together. In contrast, glucose starvation promoted AMPK activity, phosphorylation of ULK1 Ser555, and LC3-II accumulation, but with dynamics consistent with a block in autophagy flux. We studied the flux pathway and found that starvation of amino acid but not of glucose activated lysosomal acidification, which occurred independently of autophagy and ULK1. In addition to lack of activation, glucose starvation inhibited the ability of amino acid starvation to activate both autophagosome formation and the lysosome. Activation of AMPK and phosphorylation of ULK1 were determined to specifically inhibit autophagosome formation. AMPK activation also was sufficient to prevent lysosome acidification. These results indicate concerted but distinct AMPK-dependent mechanisms to suppress early and late phases of autophagy.
    Keywords AMP-activated protein kinase ; acidification ; arginine ; autophagosomes ; autophagy ; glucose ; glutamine ; leucine ; lysosomes ; metabolism ; phosphorylation ; rapamycin ; starvation ; amino acid starvation ; glucose starvation ; ULK1 ; MTORC1 ; AMPK ; lysosome acidification
    Language English
    Dates of publication 2018-0501
    Publishing place Taylor & Francis
    Document type Article ; Online
    ZDB-ID 779397-2
    ISSN 1098-5549 ; 0270-7306
    ISSN (online) 1098-5549
    ISSN 0270-7306
    DOI 10.1128/MCB.00023-18
    Database NAL-Catalogue (AGRICOLA)

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