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  1. Article ; Online: Organoid Culture of Different Intestinal Segments from Human and Mouse.

    Wang, Yalong / Tan, Ronghui / Chen, Ye-Guang

    Methods in molecular biology (Clifton, N.J.)

    2024  

    Abstract: The intestine comprises distinct segments, each characterized by unique cell populations and functions. Intestinal organoids faithfully replicate the cellular composition and functions of the intestine. Over the past decade, the organoid model has ... ...

    Abstract The intestine comprises distinct segments, each characterized by unique cell populations and functions. Intestinal organoids faithfully replicate the cellular composition and functions of the intestine. Over the past decade, the organoid model has garnered considerable attention for its application in investigation of organ development, renewal and functional performance. While the organoid culture systems for mouse small intestine and human large intestine have widely adopted, a comparison summary for different segments of the human or mouse intestine is lacking. In this study, we present a systematically detailed culture methodology for intestinal organoids, encompassing both the small intestine and the large intestine from humans or mice. This method provides a robust in vitro tool for intestinal research, and expands the possible clinical application of organoids.
    Language English
    Publishing date 2024-04-23
    Publishing country United States
    Document type Journal Article
    ISSN 1940-6029
    ISSN (online) 1940-6029
    DOI 10.1007/7651_2024_542
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Unveiling new horizons in heart research: the promise of multi-chamber cardiac organoids.

    Hou, Junjie / Chen, Ye-Guang / Xiong, Jing-Wei

    Cell regeneration (London, England)

    2024  Volume 13, Issue 1, Page(s) 10

    Abstract: Human cardiac and other organoids have recently emerged as a groundbreaking tool for advancing our understanding the developmental biology of human organs. A recent paper from Sasha Mendjan's laboratory published in the journal Cell on December 7, 2023, ... ...

    Abstract Human cardiac and other organoids have recently emerged as a groundbreaking tool for advancing our understanding the developmental biology of human organs. A recent paper from Sasha Mendjan's laboratory published in the journal Cell on December 7, 2023, reported the generation of multi-chamber cardioids from human pluripotent stem cells, a transformative technology in the field of cardiology. In this short highlight paper, we summarize their findings. Their cardioids remarkably recapitulate the complexity of the human embryonic heart, including tissue architecture, cellular diversity, and functionality providing an excellent in vitro model for investigation of human heart development, disease modeling, precision medicine, and regenerative medicine. Thus, generating cardioids is an important step forward for understanding human heart development and developing potential therapies for heart diseases.
    Language English
    Publishing date 2024-04-23
    Publishing country China
    Document type Journal Article
    ZDB-ID 2682438-3
    ISSN 2045-9769
    ISSN 2045-9769
    DOI 10.1186/s13619-024-00193-y
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: The Interplay Between TGF-β Signaling and Cell Metabolism

    Huidong Liu / Ye-Guang Chen

    Frontiers in Cell and Developmental Biology, Vol

    2022  Volume 10

    Abstract: The transforming growth factor-β (TGF-β) signaling plays a critical role in the development and tissue homeostasis in metazoans, and deregulation of TGF-β signaling leads to many pathological conditions. Mounting evidence suggests that TGF-β signaling ... ...

    Abstract The transforming growth factor-β (TGF-β) signaling plays a critical role in the development and tissue homeostasis in metazoans, and deregulation of TGF-β signaling leads to many pathological conditions. Mounting evidence suggests that TGF-β signaling can actively alter metabolism in diverse cell types. Furthermore, metabolic pathways, beyond simply regarded as biochemical reactions, are closely intertwined with signal transduction. Here, we discuss the role of TGF-β in glucose, lipid, amino acid, redox and polyamine metabolism with an emphasis on how TGF-β can act as a metabolic modulator and how metabolic changes can influence TGF-β signaling. We also describe how interplay between TGF-β signaling and cell metabolism regulates cellular homeostasis as well as the progression of multiple diseases, including cancer.
    Keywords TGF-β signaling ; Smad ; glucose metabolism ; lipid metabolism ; amino acid metabolism ; Biology (General) ; QH301-705.5
    Language English
    Publishing date 2022-03-01T00:00:00Z
    Publisher Frontiers Media S.A.
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  4. Article: The Interplay Between TGF-β Signaling and Cell Metabolism.

    Liu, Huidong / Chen, Ye-Guang

    Frontiers in cell and developmental biology

    2022  Volume 10, Page(s) 846723

    Abstract: The transforming growth factor-β (TGF-β) signaling plays a critical role in the development and tissue homeostasis in metazoans, and deregulation of TGF-β signaling leads to many pathological conditions. Mounting evidence suggests that TGF-β signaling ... ...

    Abstract The transforming growth factor-β (TGF-β) signaling plays a critical role in the development and tissue homeostasis in metazoans, and deregulation of TGF-β signaling leads to many pathological conditions. Mounting evidence suggests that TGF-β signaling can actively alter metabolism in diverse cell types. Furthermore, metabolic pathways, beyond simply regarded as biochemical reactions, are closely intertwined with signal transduction. Here, we discuss the role of TGF-β in glucose, lipid, amino acid, redox and polyamine metabolism with an emphasis on how TGF-β can act as a metabolic modulator and how metabolic changes can influence TGF-β signaling. We also describe how interplay between TGF-β signaling and cell metabolism regulates cellular homeostasis as well as the progression of multiple diseases, including cancer.
    Language English
    Publishing date 2022-03-09
    Publishing country Switzerland
    Document type Journal Article ; Review
    ZDB-ID 2737824-X
    ISSN 2296-634X
    ISSN 2296-634X
    DOI 10.3389/fcell.2022.846723
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Welcome to Cell Regeneration

    Ye-Guang Chen / Ying Lou

    Cell Regeneration, Vol 9, Iss 1, Pp 1-

    2020  Volume 2

    Keywords Medicine (General) ; R5-920 ; Biology (General) ; QH301-705.5
    Language English
    Publishing date 2020-06-01T00:00:00Z
    Publisher SpringerOpen
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  6. Article: Welcome to Cell Regeneration.

    Chen, Ye-Guang / Lou, Ying

    Cell regeneration (London, England)

    2020  Volume 9, Issue 1, Page(s) 1

    Language English
    Publishing date 2020-06-02
    Publishing country China
    Document type Editorial
    ZDB-ID 2682438-3
    ISSN 2045-9769
    ISSN 2045-9769
    DOI 10.1186/s13619-020-00050-8
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: Regulation of Dishevelled protein activity and stability by post-translational modifications and autophagy.

    Shi, Qiaoni / Chen, Ye-Guang

    Trends in biochemical sciences

    2021  Volume 46, Issue 12, Page(s) 1003–1016

    Abstract: As a key component of Wnt signaling, Dishevelled (Dvl/Dsh) plays essential roles in development processes and adult tissue homeostasis in multicellular organisms, and its deregulation results in human development disorders and other diseases. Dvl ... ...

    Abstract As a key component of Wnt signaling, Dishevelled (Dvl/Dsh) plays essential roles in development processes and adult tissue homeostasis in multicellular organisms, and its deregulation results in human development disorders and other diseases. Dvl integrates and relays complex Wnt signals by acting as a branch-point of β-catenin-dependent canonical and β-catenin-independent noncanonical pathways. It dynamically interacts with multiple proteins to modulate Wnt signaling, while its activity and stability are tightly controlled by other proteins. This Review summarizes the current understanding of regulation of Dvl activity, localization, and stability by post-translational modifications, aggregation, and autophagy, and the impacts on Dvl function in both Wnt signaling and biological processes.
    MeSH term(s) Adaptor Proteins, Signal Transducing/genetics ; Autophagy ; Dishevelled Proteins/genetics ; Dishevelled Proteins/metabolism ; Humans ; Phosphoproteins/genetics ; Protein Processing, Post-Translational ; Wnt Proteins/metabolism ; Wnt Signaling Pathway
    Chemical Substances Adaptor Proteins, Signal Transducing ; Dishevelled Proteins ; Phosphoproteins ; Wnt Proteins
    Language English
    Publishing date 2021-08-23
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Review
    ZDB-ID 194216-5
    ISSN 1362-4326 ; 0968-0004 ; 0376-5067
    ISSN (online) 1362-4326
    ISSN 0968-0004 ; 0376-5067
    DOI 10.1016/j.tibs.2021.07.008
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: HER2 phosphorylation induced by TGF-β promotes mammary morphogenesis and breast cancer progression.

    Shi, Qiaoni / Huang, Fei / Wang, Yalong / Liu, Huidong / Deng, Haiteng / Chen, Ye-Guang

    The Journal of cell biology

    2024  Volume 223, Issue 4

    Abstract: Transforming growth factor β (TGF-β) and HER2 signaling collaborate to promote breast cancer progression. However, their molecular interplay is largely unclear. TGF-β can activate mitogen-activated protein kinase (MAPK) and AKT, but the underlying ... ...

    Abstract Transforming growth factor β (TGF-β) and HER2 signaling collaborate to promote breast cancer progression. However, their molecular interplay is largely unclear. TGF-β can activate mitogen-activated protein kinase (MAPK) and AKT, but the underlying mechanism is not fully understood. In this study, we report that TGF-β enhances HER2 activation, leading to the activation of MAPK and AKT. This process depends on the TGF-β type I receptor TβRI kinase activity. TβRI phosphorylates HER2 at Ser779, promoting Y1248 phosphorylation and HER2 activation. Mice with HER2 S779A mutation display impaired mammary morphogenesis, reduced ductal elongation, and branching. Furthermore, wild-type HER2, but not S779A mutant, promotes TGF-β-induced epithelial-mesenchymal transition, cell migration, and lung metastasis of breast cells. Increased HER2 S779 phosphorylation is observed in human breast cancers and positively correlated with the activation of HER2, MAPK, and AKT. Our findings demonstrate the crucial role of TGF-β-induced S779 phosphorylation in HER2 activation, mammary gland development, and the pro-oncogenic function of TGF-β in breast cancer progression.
    MeSH term(s) Animals ; Humans ; Mice ; Lung Neoplasms/secondary ; Mitogen-Activated Protein Kinases/metabolism ; Morphogenesis ; Phosphorylation ; Proto-Oncogene Proteins c-akt/metabolism ; Transforming Growth Factor beta/metabolism ; Receptor, ErbB-2/chemistry ; Receptor, ErbB-2/genetics ; Breast Neoplasms/genetics ; Breast Neoplasms/pathology ; Receptor, Transforming Growth Factor-beta Type I/metabolism ; Breast/growth & development
    Chemical Substances Mitogen-Activated Protein Kinases (EC 2.7.11.24) ; Proto-Oncogene Proteins c-akt (EC 2.7.11.1) ; Transforming Growth Factor beta ; Erbb2 protein, mouse (EC 2.7.10.1) ; Receptor, ErbB-2 (EC 2.7.10.1) ; ERBB2 protein, human (EC 2.7.10.1) ; Receptor, Transforming Growth Factor-beta Type I (EC 2.7.11.30)
    Language English
    Publishing date 2024-02-26
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 218154-x
    ISSN 1540-8140 ; 0021-9525
    ISSN (online) 1540-8140
    ISSN 0021-9525
    DOI 10.1083/jcb.202307138
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Intestinal epithelial plasticity and regeneration via cell dedifferentiation

    Yuan Liu / Ye-Guang Chen

    Cell Regeneration, Vol 9, Iss 1, Pp 1-

    2020  Volume 11

    Abstract: Abstract The intestinal epithelium possesses a great capacity of self-renewal under normal homeostatic conditions and of regeneration upon damages. The renewal and regenerative processes are driven by intestinal stem cells (ISCs), which reside at the ... ...

    Abstract Abstract The intestinal epithelium possesses a great capacity of self-renewal under normal homeostatic conditions and of regeneration upon damages. The renewal and regenerative processes are driven by intestinal stem cells (ISCs), which reside at the base of crypts and are marked by Lgr5. As Lgr5+ ISCs undergo fast cycling and are vulnerable to damages, there must be other types of cells that can replenish the lost Lgr5+ ISCs and then regenerate the damage epithelium. In addition to Lgr5+ ISCs, quiescent ISCs at the + 4 position in the crypt have been proposed to convert to Lgr5+ ISCs during regeneration. However, this “reserve stem cell” model still remains controversial. Different from the traditional view of a hierarchical organization of the intestinal epithelium, recent works support the dynamic “dedifferentiation” model, in which various cell types within the epithelium can de-differentiate to revert to the stem cell state and then regenerate the epithelium upon tissue injury. Here, we provide an overview of the cell identity and features of two distinct models and discuss the possible mechanisms underlying the intestinal epithelial plasticity.
    Keywords Intestine ; Stem cells ; Regeneration ; Dedifferentiation ; Plasticity ; Quiescence ; Medicine (General) ; R5-920 ; Biology (General) ; QH301-705.5
    Subject code 571
    Language English
    Publishing date 2020-09-01T00:00:00Z
    Publisher SpringerOpen
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  10. Article ; Online: Mesenchymal-epithelial interaction regulates gastrointestinal tract development in mouse embryos.

    Zhao, Lianzheng / Song, Wanlu / Chen, Ye-Guang

    Cell reports

    2022  Volume 40, Issue 2, Page(s) 111053

    Abstract: After gut tube patterning in early embryos, the cellular and molecular changes of developing stomach and intestine remain largely unknown. Here, combining single-cell RNA sequencing and spatial RNA sequencing, we construct a spatiotemporal transcriptomic ...

    Abstract After gut tube patterning in early embryos, the cellular and molecular changes of developing stomach and intestine remain largely unknown. Here, combining single-cell RNA sequencing and spatial RNA sequencing, we construct a spatiotemporal transcriptomic landscape of the mouse stomach and intestine during embryonic days E9.5-E15.5. Several subpopulations are identified, including Lox
    MeSH term(s) Animals ; Cell Differentiation ; Endoderm ; Epithelium/metabolism ; Intestine, Small ; Mesoderm ; Mice
    Language English
    Publishing date 2022-07-10
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2649101-1
    ISSN 2211-1247 ; 2211-1247
    ISSN (online) 2211-1247
    ISSN 2211-1247
    DOI 10.1016/j.celrep.2022.111053
    Database MEDical Literature Analysis and Retrieval System OnLINE

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