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  1. Article: Complete genome sequence of S-type

    Singh, Vinod Kumar / Das, Chayanika / Kumar, Amit / Prajapati, Malyaj R / Yadav, Sharad Kumar

    3 Biotech

    2024  Volume 14, Issue 2, Page(s) 38

    Abstract: The present report communicates the first complete genome sequence of S-type ...

    Abstract The present report communicates the first complete genome sequence of S-type
    Language English
    Publishing date 2024-01-17
    Publishing country Germany
    Document type Case Reports
    ZDB-ID 2600522-0
    ISSN 2190-5738 ; 2190-572X
    ISSN (online) 2190-5738
    ISSN 2190-572X
    DOI 10.1007/s13205-023-03896-2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Piper chaba, an Indian spice plant extract, inhibits cell cycle G1/S phase transition and induces intrinsic apoptotic pathway in luminal breast cancer cells.

    Prajapati, Kumari Sunita / Kumar, Shashank

    Cell biochemistry and function

    2023  Volume 41, Issue 8, Page(s) 1230–1241

    Abstract: Piper chaba (Piperaceae) is a medicinal spice plant that possesses several pharmacological activities. In the present study, we for the first time studied the effect of P. chaba extract on breast cancer cells. P. chaba stem methanolic (PCSM) extract ... ...

    Abstract Piper chaba (Piperaceae) is a medicinal spice plant that possesses several pharmacological activities. In the present study, we for the first time studied the effect of P. chaba extract on breast cancer cells. P. chaba stem methanolic (PCSM) extract produced time and dose dependent cytotoxicity in luminal breast cancer cells (MCF-7 and T47D) with a minimal toxicity in breast normal cells (MCF-10A) at 10-100 µg/mL concentration. PCSM extract exerts 16.79 and 31.21 µg/mL IC
    MeSH term(s) Humans ; Female ; Plant Extracts/pharmacology ; Piper ; Cell Line, Tumor ; Breast Neoplasms/drug therapy ; S Phase ; Spices ; Apoptosis ; Cell Cycle ; MCF-7 Cells ; RNA, Messenger ; Cell Proliferation
    Chemical Substances Plant Extracts ; RNA, Messenger
    Language English
    Publishing date 2023-09-15
    Publishing country England
    Document type Journal Article
    ZDB-ID 283643-9
    ISSN 1099-0844 ; 0263-6484
    ISSN (online) 1099-0844
    ISSN 0263-6484
    DOI 10.1002/cbf.3857
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Loss of miR-6844 alters stemness/self-renewal and cancer hallmark(s) markers through CD44-JAK2-STAT3 signaling axis in breast cancer stem-like cells.

    Prajapati, Kumari Sunita / Kumar, Shashank

    Journal of cellular biochemistry

    2023  Volume 124, Issue 8, Page(s) 1186–1202

    Abstract: MicroRNAs regulate breast stemness and self-renewal properties in breast cancer cells at the molecular level. Recently we reported the clinical relevance and in vitro expression profile of novel miR-6844 in breast cancer and -derived stem-like cells ( ... ...

    Abstract MicroRNAs regulate breast stemness and self-renewal properties in breast cancer cells at the molecular level. Recently we reported the clinical relevance and in vitro expression profile of novel miR-6844 in breast cancer and -derived stem-like cells (mammosphere). In the present study, we first time explore the functional role of loss of miR-6844 in breast cancer cells derived mammosphere. Down expression of miR-6844 significantly decreased cell proliferation in MCF-7 and T47D cells derived mammosphere in a time-dependent manner. MiR-6844 down expression reduced the sphere formation in terms of size and number in test cells. Loss of miR-6844 significantly altered stemness and self-renewal markers (Bmi-1, Nanog, c-Myc, Sox2, and CD44) in mammosphere compared to negative control spheres. Moreover, loss of miR-6844 inhibits the JAK2-STAT3 signaling pathway by decreasing p-JAK2 and p-STAT3 levels in breast cancer cells derived mammosphere. Loss of miR-6844 expression significantly decreased CCND1 and CDK4 mRNA/protein levels and arrested breast cancer stem-like cells in G2/M phase. Reduced expression of miR-6844 increased Bax/Bcl-2 ratio, late apoptotic cell population, and Caspase 9 and 3/7 activity in the mammosphere. Low expression of miR-6844 decreased migratory and invasive cells by altering the expression of Snail, E-cad, and Vimentin at mRNA/protein levels. In conclusion, loss of miR-6844 decreases stemness/self-renewal and other cancer hallmark in breast cancer stem-like cells through CD44-JAK2-STAT3 axis. Thus, downregulation of miR-6844 by therapeutic agents might be a novel strategy to target breast cancer stemness and self-renewal.
    MeSH term(s) Humans ; Female ; Breast Neoplasms/genetics ; Breast Neoplasms/metabolism ; MicroRNAs/genetics ; MicroRNAs/metabolism ; Signal Transduction ; Down-Regulation ; Neoplastic Stem Cells/metabolism ; RNA, Messenger/metabolism ; Cell Proliferation ; Cell Line, Tumor ; Gene Expression Regulation, Neoplastic ; Hyaluronan Receptors/genetics ; Hyaluronan Receptors/metabolism ; Janus Kinase 2/genetics ; Janus Kinase 2/metabolism ; STAT3 Transcription Factor/genetics ; STAT3 Transcription Factor/metabolism
    Chemical Substances MicroRNAs ; RNA, Messenger ; CD44 protein, human ; Hyaluronan Receptors ; JAK2 protein, human (EC 2.7.10.2) ; Janus Kinase 2 (EC 2.7.10.2) ; STAT3 protein, human ; STAT3 Transcription Factor
    Language English
    Publishing date 2023-07-12
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 392402-6
    ISSN 1097-4644 ; 0730-2312
    ISSN (online) 1097-4644
    ISSN 0730-2312
    DOI 10.1002/jcb.30441
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Identification of cancer stemness related miRNA(s) using integrated bioinformatics analysis and in vitro validation.

    Prajapati, Kumari Sunita / Shuaib, Mohd / Kushwaha, Prem Prakash / Singh, Atul Kumar / Kumar, Shsahank

    3 Biotech

    2021  Volume 11, Issue 10, Page(s) 446

    Abstract: The stemness property of cells allows them to sustain their lineage, differentiation, proliferation, and regeneration. MicroRNAs are small non-coding RNAs known to regulate the stemness property of cells by regulating the expression of stem cell ... ...

    Abstract The stemness property of cells allows them to sustain their lineage, differentiation, proliferation, and regeneration. MicroRNAs are small non-coding RNAs known to regulate the stemness property of cells by regulating the expression of stem cell signaling pathway proteins at mRNA level. Dysregulated miRNA expression and associated stem cell signaling pathways in normal stem cells give rise to cancer stem cells. Thus, the present study was aimed to identify the miRNAs involved in the regulation of major stem cell signaling pathways. The proteins (
    Supplementary information: The online version contains supplementary material available at 10.1007/s13205-021-02994-3.
    Language English
    Publishing date 2021-09-23
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 2600522-0
    ISSN 2190-5738 ; 2190-572X
    ISSN (online) 2190-5738
    ISSN 2190-572X
    DOI 10.1007/s13205-021-02994-3
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  5. Article ; Online: Antiretroviral Treatment Gaps and Adherence Among People with HIV in the U.S. Medicare Program.

    Li, Pengxiang / Prajapati, Girish / Geng, Zhi / Ladage, Vrushabh P / Arduino, Jean Marie / Watson, Dovie L / Gross, Robert / Doshi, Jalpa A

    AIDS and behavior

    2023  Volume 28, Issue 3, Page(s) 1002–1014

    Abstract: Approximately one-quarter of people with HIV (PWH) in the U.S. receive coverage ...

    Abstract Approximately one-quarter of people with HIV (PWH) in the U.S. receive coverage through the Medicare program; however, no prior real-world study has examined antiretroviral therapy (ART) gaps and adherence and associated factors in this population. This retrospective cohort analysis used 2013-2018 national Medicare fee-for-service claims data to identify all PWH initiated on a new ART regimen including protease inhibitors [PI], non-nucleoside reverse transcriptase inhibitors [NNRTIs], or integrase strand transfer inhibitors [INSTIs] between 1/1/2014 and 12/31/2017. Study outcomes included ART adherence (based on proportion of days covered [PDC]), continuous treatment gaps ranging from 1 to 6 days to ≥ 180 days, and discontinuation (continuous gap ≥ 90 days) in the 12-month follow-up period. Multivariable regressions were used to assess factors associated with ART adherence and discontinuation. The final sample included 48,627 PWH (mean age: 54.5 years, 74.4% male, 47.5% White, 89.8% disabled). Approximately 53.0% of PWH had a PDC ≥ 0.95, 30.2% had a PDC between 0.70 and < 0.95, and 16.8% had PDC < 0.70. Treatment gaps of at least ≥ 7-days (55.2%) and ≥ 30-days (26.2%) were common and 10.1% PWH discontinued treatment. Younger age, female sex, Black race, higher comorbidity score, mental health conditions, and substance use disorder were associated with higher odds of lower adherence and discontinuation (all p-values < 0.05). In conclusion, suboptimal adherence and treatment gaps in ART use were commonly observed among PWH in Medicare. Interventions and policies to mitigate barriers to adherence are urgently needed in this population to both improve their survival and increase the potential for ending the HIV epidemic in the US.
    MeSH term(s) Humans ; Male ; Female ; Aged ; United States/epidemiology ; Middle Aged ; Medicare ; Retrospective Studies ; HIV Infections/drug therapy ; HIV Infections/epidemiology ; Anti-Retroviral Agents/therapeutic use ; Cohort Studies ; Medication Adherence
    Chemical Substances Anti-Retroviral Agents
    Language English
    Publishing date 2023-10-27
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1339885-4
    ISSN 1573-3254 ; 1090-7165
    ISSN (online) 1573-3254
    ISSN 1090-7165
    DOI 10.1007/s10461-023-04208-8
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  6. Article: Natural Steroidal Lactone Induces G1/S Phase Cell Cycle Arrest and Intrinsic Apoptotic Pathway by Up-Regulating Tumor Suppressive miRNA in Triple-Negative Breast Cancer Cells.

    Shuaib, Mohd / Prajapati, Kumari Sunita / Gupta, Sanjay / Kumar, Shashank

    Metabolites

    2022  Volume 13, Issue 1

    Abstract: Triple-negative breast cancer (TNBC) is an aggressive subtype of breast cancer with minimal treatment options. In the present work, Withaferin A (WA), a natural steroidal lactone found ... ...

    Abstract Triple-negative breast cancer (TNBC) is an aggressive subtype of breast cancer with minimal treatment options. In the present work, Withaferin A (WA), a natural steroidal lactone found in
    Language English
    Publishing date 2022-12-24
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2662251-8
    ISSN 2218-1989
    ISSN 2218-1989
    DOI 10.3390/metabo13010029
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  7. Article ; Online: India’s Response to Coronavirus Pandemic

    Trivedi, Prajapati

    The American Review of Public Administration

    Nine Lessons for Effective Public Management

    2020  Volume 50, Issue 6-7, Page(s) 725–728

    Abstract: COVID-19 pandemic has spared no country. Yet, the degree of infection and consequent deaths have differed vastly. There is, as yet, no scientific explanation based on climatic or genetic differences in populations. However, there seems to be an emerging ... ...

    Abstract COVID-19 pandemic has spared no country. Yet, the degree of infection and consequent deaths have differed vastly. There is, as yet, no scientific explanation based on climatic or genetic differences in populations. However, there seems to be an emerging consensus that public management matters. This article looks at three largest countries in the World and finds that outcomes in India, measured in terms of deaths from COVID-19 virus, are a fraction of deaths compared to other two large populous countries and appears to be an outlier. This article examines the public management response of a democratic government and draws lessons for effective public management in dealing with other grand public management challenges of our times.
    Keywords Marketing ; Sociology and Political Science ; Public Administration ; covid19
    Language English
    Publisher SAGE Publications
    Publishing country us
    Document type Article ; Online
    ZDB-ID 2020820-0
    ISSN 1552-3357 ; 0275-0740 ; 0026-346X
    ISSN (online) 1552-3357
    ISSN 0275-0740 ; 0026-346X
    DOI 10.1177/0275074020942411
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  8. Article ; Online: Weight gain before and after switch from TDF to TAF in a U.S. cohort study.

    Mallon, Patrick Wg / Brunet, Laurence / Hsu, Ricky K / Fusco, Jennifer S / Mounzer, Karam C / Prajapati, Girish / Beyer, Andrew P / Wohlfeiler, Michael B / Fusco, Gregory P

    Journal of the International AIDS Society

    2021  Volume 24, Issue 4, Page(s) e25702

    Abstract: ... switch.: Methods: Antiretroviral-experienced, virologically suppressed PLWH in the U.S. OPERA cohort ... diverse U.S. cohort of PLWH, switching from TDF to TAF was associated with pronounced weight gain ...

    Abstract Introduction: Although weight gain has been reported with the use of integrase strand transfer inhibitors (InSTI), concurrent use of tenofovir alafenamide (TAF) has been implicated in recent studies. This study examined weight changes in people living with HIV (PLWH) who switched from tenofovir disoproxil fumarate (TDF) to TAF, to clarify the relative contribution to weight gain of core agents versus TDF to TAF switch.
    Methods: Antiretroviral-experienced, virologically suppressed PLWH in the U.S. OPERA cohort were included if they switched from TDF to TAF (5NOV2015-28FEB2019) and either maintained all other antiretrovirals or switched from a non-InSTI to an InSTI. Linear mixed models were used to assess weight changes before/after the switch to TAF (restricted cubic splines on time) and rates of change over time (linear splines on time, based on the shape of the weight change curves). Changes in weight on TDF or TAF were assessed among those who maintained other antiretrovirals (overall, by core class), and those who maintained an InSTI or switched to an InSTI (by core agent). All models were adjusted for age, sex, race, (age-sex, race-sex interactions), BMI, CD4 cell count, endocrine disorders and concurrent medications that could affect weight.
    Results: A total of 6908 PLWH were included, with 5479 maintaining all other antiretrovirals (boosted protease inhibitor: 746, non-nucleoside reverse transcriptase inhibitor: 1452, InSTI: 3281) and 1429 switching from a non-InSTI to an InSTI (elvitegravir/cobicistat: 1120, dolutegravir: 174, bictegravir: 129). In adjusted models, modest weight gain was observed over time on TDF for most (0.24 to 0.71 kg/year); raltegravir was the exception with weight loss. Switching to TAF was associated with early, pronounced weight gain for all (1.80 to 4.47 kg/year). This effect with TAF switch was observed both in PLWH maintaining other antiretrovirals and those switching to an InSTI, regardless of which InSTI agent was used. Weight gain tended to slow down or plateau approximately nine months after switch to TAF.
    Conclusions: In this large, diverse U.S. cohort of PLWH, switching from TDF to TAF was associated with pronounced weight gain immediately after switch, regardless of the core class or core agent, suggesting an independent effect of TAF on weight gain.
    MeSH term(s) Adult ; Alanine/adverse effects ; Alanine/therapeutic use ; Anti-HIV Agents/therapeutic use ; Antiretroviral Therapy, Highly Active/adverse effects ; Antiretroviral Therapy, Highly Active/methods ; Cohort Studies ; Diabetes Mellitus, Type 2/drug therapy ; Female ; HIV Infections/drug therapy ; Humans ; Male ; Middle Aged ; Sustained Virologic Response ; Tenofovir/adverse effects ; Tenofovir/analogs & derivatives ; Tenofovir/therapeutic use ; Treatment Outcome ; Weight Gain
    Chemical Substances Anti-HIV Agents ; Tenofovir (99YXE507IL) ; tenofovir alafenamide (EL9943AG5J) ; Alanine (OF5P57N2ZX)
    Language English
    Publishing date 2021-04-10
    Publishing country Switzerland
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2467110-1
    ISSN 1758-2652 ; 1758-2652
    ISSN (online) 1758-2652
    ISSN 1758-2652
    DOI 10.1002/jia2.25702
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  9. Article ; Online: The Risk Factors of Cerebral Palsy among the Children Attending a Children’s Hospital

    Tulashi Adhikari Mishra / Sarala Shrestha / Bina Prajapati Manandhar / Pratima Sharma

    Journal of Nepal Health Research Council, Vol 19, Iss

    2022  Volume 04

    Abstract: ... neurological out-patient department of a Children’s Hospital in Kathmandu, Nepal and control included children ...

    Abstract Background: Cerebral Palsy is a disorder of movement and posture caused by nonprogressive abnormal brain function. It is a lifelong condition and one of the most common causes of physical disability in children. The objective of this study was to find out the risk factors associated with cerebral palsy among children. Methods: A case control study was carried out among 330 children where cases and controls were taken in the ratio of 1:2. Cases included children diagnosed with cerebral palsy and attending neurological out-patient department of a Children’s Hospital in Kathmandu, Nepal and control included children not having cerebral palsy and attending medical out-patient department of the same hospital for other medical problems. The data were collected from November 29, 2017 to May 20, 2018 by using a pretested interview schedule. The findings were analyzed using frequency, percentage, mean, standard deviation and chi square test and odds ratio. Results: Findings revealed that about one-fourth (24.5%) cases were diagnosed to have CP within one year of age. In terms of sex majority (63.6%) of the cases were male and majority were the first born children. Findings also revealed that infection during pregnancy (OR:2.9, CI: 1.1-7.5), family history of cerebral palsy (OR:5.6, CI: 1.4-21.8), instrumental delivery (OR: 10.9, CI:2.3-50.6), not crying immediately after birth (OR: 17.3, CI: 8.6-34.6), were significantly associated with cerebral palsy. Conclusions: Most of the identified risk factors are preventable and controllable through proper antenatal and skilled intranatal care. Thus, every pregnant woman should receive proper care during pregnancy as well as during delivery for the prevention of the identified risk factors. Keywords: Cerebral palsy; children; risk factors
    Keywords Public aspects of medicine ; RA1-1270
    Subject code 610
    Language English
    Publishing date 2022-03-01T00:00:00Z
    Publisher Nepal Health Research Council
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  10. Article: India’s Response to Coronavirus Pandemic: Nine Lessons for Effective Public Management

    Trivedi, Prajapati

    Am. Rev. Public Adm.

    Abstract: COVID-19 pandemic has spared no country. Yet, the degree of infection and consequent deaths have differed vastly. There is, as yet, no scientific explanation based on climatic or genetic differences in populations. However, there seems to be an emerging ... ...

    Abstract COVID-19 pandemic has spared no country. Yet, the degree of infection and consequent deaths have differed vastly. There is, as yet, no scientific explanation based on climatic or genetic differences in populations. However, there seems to be an emerging consensus that public management matters. This article looks at three largest countries in the World and finds that outcomes in India, measured in terms of deaths from COVID-19 virus, are a fraction of deaths compared to other two large populous countries and appears to be an outlier. This article examines the public management response of a democratic government and draws lessons for effective public management in dealing with other grand public management challenges of our times.
    Keywords covid19
    Publisher WHO
    Document type Article
    Note WHO #Covidence: #671762
    Database COVID19

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