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  1. Book ; Online: Raw and normalized X-ray fluorescence (XRF) scannings of IODP Expedition 321, Site U1338, supplementary data to: Lyle, Mitchell W; Olivarez Lyle, Annett; Gorgas, TJ; Holbourn, Ann E L; Westerhold, Thomas; Hathorne, Ed C; Kimoto, Katsunori; Yamamoto, Shinya (2012): Data report: raw and normalized elemental data along the Site U1338 splice from X-ray flourescence scanning. In: Pälike, H; Lyle, M; Nishi, H; Raffi, I; Gamage, K; Klaus, A; and the Expedition 320/321 Scientists, Proc. IODP, 320/321: Tokyo (Integrated Ocean Drilling Program Management International, Inc.)., 320/321

    Lyle, Mitchell W / Gorgas, TJ / Hathorne, Ed C / Holbourn, Ann E L / Kimoto, Katsunori / Olivarez Lyle, Annett / Westerhold, Thomas / Yamamoto, Shinya

    2012  

    Abstract: We used X-ray fluorescence (XRF) scanning on Site U1338 sediments from Integrated Ocean Drilling Program Expedition 321 to measure sediment geochemical compositions at 2.5 cm resolution for the 450 m of the Site U1338 spliced sediment column. This ... ...

    Abstract We used X-ray fluorescence (XRF) scanning on Site U1338 sediments from Integrated Ocean Drilling Program Expedition 321 to measure sediment geochemical compositions at 2.5 cm resolution for the 450 m of the Site U1338 spliced sediment column. This spatial resolution is equivalent to ~2 k.y. age sampling in the 0-5 Ma section and ~1 k.y. resolution from 5 to 17 Ma. Here we report the data and describe data acquisition conditions to measure Al, Si, K, Ca, Ti, Fe, Mn, and Ba in the solid phase. We also describe a method to convert the data from volume-based raw XRF scan data to a normalized mass measurement ready for calibration by other geochemical methods. Both the raw and normalized data are reported along the Site U1338 splice.
    Language English
    Dates of publication 2012-9999
    Size Online-Ressource
    Publisher PANGAEA - Data Publisher for Earth & Environmental Science
    Publishing place Bremen/Bremerhaven
    Document type Book ; Online
    Note This dataset is supplement to doi:10.2204/iodp.proc.320321.203.2012
    DOI 10.1594/PANGAEA.780290
    Database Library catalogue of the German National Library of Science and Technology (TIB), Hannover

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  2. Book ; Conference proceedings ; Online: (Table T1) Stable carbon isotopic composition of n-alkanes and carbon preference index of ODP Hole 208-1263A, supplementary data to: Hasegawa, Takashi; Yamamoto, Shinya; Pratt, Lisa M (2006): Data report: Stable carbon isotope fluctuation of long-chain n-alkanes from Leg 208 Hole 1263A across the Paleocene/Eocene boundary. In: Kroon, D; Zachos, JC; Richter, C (eds.) Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 208, 1-11

    Hasegawa, Takashi / Pratt, Lisa M / Yamamoto, Shinya

    2006  

    Abstract: Carbon isotope ratios of terrestrial biomarkers extracted from Ocean Drilling Program Hole 1263A show a prominent negative excursion across the Paleocene/Eocene boundary. The isotope profiles of the normal alkanes nonacosane (n-C29), hentriacontane (n- ... ...

    Abstract Carbon isotope ratios of terrestrial biomarkers extracted from Ocean Drilling Program Hole 1263A show a prominent negative excursion across the Paleocene/Eocene boundary. The isotope profiles of the normal alkanes nonacosane (n-C29), hentriacontane (n-C31), and tritriacontane (n-C33), the first such profiles generated with samples from a pelagic section, are similar to those of carbonate carbon, though the magnitude of the excursion is larger, roughly 4-5. In addition, the n-alkane records show an inflection at 334.70 meters composite depth, which is roughly equivalent to where the inflection occurs in the carbonate record. These results suggest that the terrestrial compounds are directly recording changes in atmospheric carbon 13C and that the actual excursion may have been larger than that recorded by marine carbonates.
    Language English
    Dates of publication 2006-9999
    Size Online-Ressource
    Publisher PANGAEA - Data Publisher for Earth & Environmental Science
    Publishing place Bremen/Bremerhaven
    Document type Book ; Conference proceedings ; Online
    Note This dataset is supplement to doi:10.2973/odp.proc.sr.208.202.2006
    DOI 10.1594/PANGAEA.776205
    Database Library catalogue of the German National Library of Science and Technology (TIB), Hannover

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  3. Article ; Online: Editorial Comment to Prognostic implication of staging of seminal vesicle invasion in patients with prostatic adenocarcinoma after prostatectomy.

    Yamamoto, Shinya

    International journal of urology : official journal of the Japanese Urological Association

    2021  Volume 28, Issue 10, Page(s) 1045–1046

    MeSH term(s) Adenocarcinoma/surgery ; Humans ; Male ; Prognosis ; Prostatectomy ; Prostatic Neoplasms/surgery ; Seminal Vesicles/diagnostic imaging ; Seminal Vesicles/surgery
    Language English
    Publishing date 2021-07-31
    Publishing country Australia
    Document type Editorial ; Comment
    ZDB-ID 1328401-0
    ISSN 1442-2042 ; 0919-8172
    ISSN (online) 1442-2042
    ISSN 0919-8172
    DOI 10.1111/iju.14660
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Correction: A report of stillbirth and subsequent maternal cannibalism observed in a free-ranging group of Japanese macaques at Awajishima, Japan.

    Kaigaishi, Yu / Yamamoto, Shinya

    Primates; journal of primatology

    2023  Volume 64, Issue 6, Page(s) 579–580

    Language English
    Publishing date 2023-09-13
    Publishing country Japan
    Document type Published Erratum
    ZDB-ID 2100453-5
    ISSN 1610-7365 ; 0032-8332
    ISSN (online) 1610-7365
    ISSN 0032-8332
    DOI 10.1007/s10329-023-01092-7
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Editorial Comment to Rare gastrointestinal stromal tumor in an ileal conduit detected by recurrent massive bleeding from the stoma.

    Yamamoto, Shinya

    IJU case reports

    2020  Volume 3, Issue 5, Page(s) 210

    Language English
    Publishing date 2020-08-08
    Publishing country Australia
    Document type Editorial
    ISSN 2577-171X
    ISSN (online) 2577-171X
    DOI 10.1002/iju5.12198
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Methodological Issues in a Retrospective Study on Short-course Antibiotic Therapy for Pseudomonas aeruginosa Bloodstream Infections in China.

    Okumura, Nobumasa / Yamada, Gen / Yamamoto, Kei / Tsuzuki, Shinya

    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

    2024  

    Language English
    Publishing date 2024-03-19
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1099781-7
    ISSN 1537-6591 ; 1058-4838
    ISSN (online) 1537-6591
    ISSN 1058-4838
    DOI 10.1093/cid/ciae146
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Making sense out of missense mutations: Mechanistic dissection of Notch receptors through structure-function studies in Drosophila.

    Yamamoto, Shinya

    Development, growth & differentiation

    2020  Volume 62, Issue 1, Page(s) 15–34

    Abstract: Notch signaling is involved in the development of almost all organ systems and is required post-developmentally to modulate tissue homeostasis. Rare variants in Notch signaling pathway genes are found in patients with rare Mendelian disorders, while ... ...

    Abstract Notch signaling is involved in the development of almost all organ systems and is required post-developmentally to modulate tissue homeostasis. Rare variants in Notch signaling pathway genes are found in patients with rare Mendelian disorders, while unique or recurrent somatic mutations in a similar set of genes are identified in cancer. The human genome contains four genes that encode Notch receptors, NOTCH1-4, all of which are linked to genetic diseases and cancer. Although some mutations have been classified as clear loss- or gain-of-function alleles based on cellular or rodent based assay systems, the functional consequence of many variants/mutations in human Notch receptors remain unknown. In this review, I will first provide an overview of the domain structure of Notch receptors and discuss how each module is known to regulate Notch signaling activity in vivo using the Drosophila Notch receptor as an example. Next, I will introduce some interesting mutant alleles that have been isolated in the fly Notch gene over the past > 100 years of research and discuss how studies of these mutations have facilitated the understanding of Notch biology. By identifying unique alleles of the fly Notch gene through forward genetic screens, mapping their molecular lesions and characterizing their phenotypes in depth, one can begin to unravel new mechanistic insights into how different domains of Notch fine-tune signaling output. Such information can be useful in deciphering the functional consequences of rare variants/mutations in human Notch receptors, which in turn can influence disease management and therapy.
    MeSH term(s) Amino Acid Substitution ; Animals ; Drosophila Proteins/chemistry ; Drosophila Proteins/genetics ; Drosophila Proteins/metabolism ; Drosophila melanogaster ; Mutation, Missense ; Protein Domains ; Receptors, Notch/chemistry ; Receptors, Notch/genetics ; Receptors, Notch/metabolism ; Structure-Activity Relationship
    Chemical Substances Drosophila Proteins ; N protein, Drosophila ; Receptors, Notch
    Language English
    Publishing date 2020-01-13
    Publishing country Japan
    Document type Journal Article ; Review
    ZDB-ID 280433-5
    ISSN 1440-169X ; 0012-1592
    ISSN (online) 1440-169X
    ISSN 0012-1592
    DOI 10.1111/dgd.12640
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article: Drone Observation for the Quantitative Study of Complex Multilevel Societies.

    Maeda, Tamao / Yamamoto, Shinya

    Animals : an open access journal from MDPI

    2023  Volume 13, Issue 12

    Abstract: Unmanned aerial vehicles (drones) have recently been used in various behavioral ecology studies. However, their application has been limited to single groups, and most studies have not implemented individual identification. A multilevel society refers to ...

    Abstract Unmanned aerial vehicles (drones) have recently been used in various behavioral ecology studies. However, their application has been limited to single groups, and most studies have not implemented individual identification. A multilevel society refers to a social structure in which small stable "core units" gather and make a larger, multiple-unit group. Here, we introduce recent applications of drone technology and individual identification to complex social structures involving multiple groups, such as multilevel societies. Drones made it possible to obtain the identification, accurate positioning, or movement of more than a hundred individuals in a multilevel social group. In addition, in multilevel social groups, drones facilitate the observation of heterogeneous spatial positioning patterns and mechanisms of behavioral propagation, which are different from those in a single-level group. Such findings may contribute to the quantitative definition and assessment of multilevel societies and enhance our understanding of mechanisms of multiple group aggregation. The application of drones to various species may resolve various questions related to multilevel societies.
    Language English
    Publishing date 2023-06-08
    Publishing country Switzerland
    Document type Journal Article ; Review
    ZDB-ID 2606558-7
    ISSN 2076-2615
    ISSN 2076-2615
    DOI 10.3390/ani13121911
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article: Teaching Social Niceties to Individuals with Autism Spectrum Disorder Using the Textual Prompt.

    Yamamoto, Shinya / Isawa, Shinzo

    Behavior analysis in practice

    2023  Volume 17, Issue 1, Page(s) 296–305

    Abstract: This study examines the effectiveness of textual prompts in acquiring social niceties in the workplace for five individuals with autism spectrum disorder. Based on the results of this study, resource- and time-efficiency interventions are discussed. The ... ...

    Abstract This study examines the effectiveness of textual prompts in acquiring social niceties in the workplace for five individuals with autism spectrum disorder. Based on the results of this study, resource- and time-efficiency interventions are discussed. The participants were taught two statements: "Do you have a minute?" and "Thank you for your time." The participants worked in a simulation setting simulating the workplace. When an opportunity for interaction with an actor acting as a supervisor or colleague was provided to the participants, they were required to use social niceties before and after the interaction. During the training, the participants were presented with a textual prompt to use social niceties. As a result, most participants were able to use social niceties compared to the baseline. However, the percentage of correct responses was not stable, and the results did not show that the participants had fully acquired social niceties. A comparison of the results of the previous study with the results of this study indicates that it is difficult to obtain sufficient efficacy from interventions using only the textual prompt.
    Language English
    Publishing date 2023-08-08
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2583900-7
    ISSN 2196-8934 ; 1998-1929
    ISSN (online) 2196-8934
    ISSN 1998-1929
    DOI 10.1007/s40617-023-00840-x
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Role of

    Yamaguchi, Masamitsu / Yamamoto, Shinya

    International journal of molecular sciences

    2022  Volume 23, Issue 8

    Abstract: The fruit ... ...

    Abstract The fruit fly
    MeSH term(s) Animals ; Disease Models, Animal ; Drosophila/genetics ; Drosophila melanogaster/genetics ; Humans
    Language English
    Publishing date 2022-04-11
    Publishing country Switzerland
    Document type Editorial
    ZDB-ID 2019364-6
    ISSN 1422-0067 ; 1422-0067 ; 1661-6596
    ISSN (online) 1422-0067
    ISSN 1422-0067 ; 1661-6596
    DOI 10.3390/ijms23084203
    Database MEDical Literature Analysis and Retrieval System OnLINE

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