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Article ; Online: Unrevealing the shared genetic mechanisms underlying C-reactive protein and schizophrenia.

Yang, Zihao / Li, David / He, Ying / Chen, Xiaogang / Li, Zongchang

Progress in neuro-psychopharmacology & biological psychiatry

2023 Volume 126, Page(s) 110785

Abstract: ... conclusions regarding the association between C-reactive protein (CRP) level and schizophrenia risk ... However, the shared genetic mechanisms underlying CRP and schizophrenia remain poorly understood. Here, we examined ... genome-wide association studies (GWAS) on CRP level and schizophrenia. Furthermore, we identified their shared genetic variants ...

Abstract	Longitudinal observational studies and Mendelian randomization research have obtained contradictory conclusions regarding the association between C-reactive protein (CRP) level and schizophrenia risk. However, the shared genetic mechanisms underlying CRP and schizophrenia remain poorly understood. Here, we examined the global and local genetic correlations using summary statistics from large-scale genome-wide association studies (GWAS) on CRP level and schizophrenia. Furthermore, we identified their shared genetic variants by applying the conditional false discovery rate approach and performed functional analyses of shared variants to explore the shared genetic mechanisms underlying CRP level and schizophrenia. We found a significant negative genetic correlation at the whole genome level and five significant local genetic correlations between CRP level and schizophrenia. Eight-three shared genetic loci were identified, from which single-nucleotide polymorphism (SNP) presents mixed effects on the increased CRP level and schizophrenia risk. Additionally, we identified 64 and 73 candidate genes that were mapped from SNPs with"concordant effect"(ceSNPs) and"discordant effect"(deSNPs) on the CRP level and schizophrenia risk respectively. Functional analyses revealed that genes mapped from ceSNPs and deSNPs exhibited similar patterns of human brain developmental expression trajectories and biological processes, but differed in expression levels and cell-type-specific enrichment in brain tissues. Our findings demonstrated mixed effects of shared genetic architecture between CRP level and schizophrenia, proving a deeper insight into the shared genetic aetiology underlying the CRP level and schizophrenia.
MeSH term(s)	Humans ; C-Reactive Protein/genetics ; C-Reactive Protein/metabolism ; Schizophrenia/genetics ; Genome-Wide Association Study ; Genetic Loci ; Polymorphism, Single Nucleotide/genetics ; Genetic Predisposition to Disease/genetics
Chemical Substances	C-Reactive Protein (9007-41-4)
Language	English
Publishing date	2023-05-05
Publishing country	England
Document type	Journal Article
ZDB-ID	781181-0
ISSN	1878-4216 ; 0278-5846
ISSN (online)	1878-4216
ISSN	0278-5846
DOI	10.1016/j.pnpbp.2023.110785
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Article: Shared genetic factors and causal association between chronic hepatitis C infection and diffuse large B cell lymphoma.

Fu, Leihua / Yu, Jieni / Chen, Zhe / Gao, Feidan / Zhang, Zhijian / Fu, Jiaping / Feng, Weiying / Hong, Pan / Jin, Jing

Infectious agents and cancer

2024 Volume 19, Issue 1, Page(s) 15

Abstract: ... lymphomas in patients with chronic hepatitis C virus (HCV) compared to non-infected individuals ... Mendelian randomization analysis was employed to explore the association between chronic hepatitis C (CHC) and B-cell lymphomas ... conducted to find shared genetic variants that might connect CHC with B-cell lymphomas and ...

Abstract	Background: Epidemiological research and systematic meta-analyses indicate a higher risk of B-cell lymphomas in patients with chronic hepatitis C virus (HCV) compared to non-infected individuals. However, the genetic links between HCV and these lymphomas remain under-researched. Methods: Mendelian randomization analysis was employed to explore the association between chronic hepatitis C (CHC) and B-cell lymphomas as well as chronic lymphocytic leukemia (CLL). Approximate Bayes Factor (ABF) localization analysis was conducted to find shared genetic variants that might connect CHC with B-cell lymphomas and chronic lymphocytic leukemia (CLL). Furthermore, The Variant Effect Predictor (VEP) was utilized to annotate the functional effects of the identified genetic variants. Results: Mendelian randomization revealed a significant association between CHC and increased diffuse large B cell lymphoma (DLBCL) risk (OR: 1.34; 95% CI: 1.01-1.78; P = 0.0397). Subsequent colocalization analysis pinpointed two noteworthy variants, rs17208853 (chr6:32408583) and rs482759 (chr6:32227240) between these two traits. The annotation of these variants through the VEP revealed their respective associations with the butyrophilin-like protein 2 (BTNL2) and notch receptor 4 (NOTCH4) genes, along with the long non-coding RNA (lncRNA) TSBP1-AS1. Conclusion: This research provides a refined genetic understanding of the CHC-DLBCL connection, opening avenues for targeted therapeutic research and intervention.
Language	English
Publishing date	2024-04-23
Publishing country	England
Document type	Journal Article
ZDB-ID	2251117-9
ISSN	1750-9378
ISSN	1750-9378
DOI	10.1186/s13027-024-00577-4
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Article ; Online: Using the Diabetes Care System for a County-Wide Hepatitis C Elimination: An Integrated Community-Based Shared Care Model in Taiwan.

Hu, Tsung-Hui / Luh, Dih-Ling / Tsao, Yo-Yu / Lin, Ting-Yu / Chang, Chun-Ju / Su, Wei-Wen / Yang, Chih-Chao / Yang, Chang-Jung / Chen, Hung-Pin / Liao, Pei-Yung / Su, Shih-Li / Chen, Li-Sheng / Hsiu-Hsi Chen, Tony / Yeh, Yen-Po

The American journal of gastroenterology

2023 Volume 119, Issue 5, Page(s) 883–892

Abstract: Introduction: Despite the serious risks of diabetes with hepatitis C virus (HCV) infection ... this preventable comorbidity is rarely a priority for HCV elimination. We aim to examine how a shared care model ... treatment in PwD through an innovative shared care model. ...

Abstract	Introduction: Despite the serious risks of diabetes with hepatitis C virus (HCV) infection, this preventable comorbidity is rarely a priority for HCV elimination. We aim to examine how a shared care model could eliminate HCV in patients with diabetes (PwD) in primary care. Methods: There were 27 community-based Diabetes Health Promotion Institutes in each township/city of Changhua, Taiwan. PwD from these institutes from January 2018 to December 2020 were enrolled. HCV screening and treatment were integrated into diabetes structured care through collaboration between diabetes care and HCV care teams. Outcome measures included HCV care continuum indicators. Township/city variation in HCV infection prevalence and care cascades were also examined. Results: Of the 10,684 eligible PwD, 9,984 (93.4%) underwent HCV screening, revealing a 6.18% (n = 617) anti-HCV seroprevalence. Among the 597 eligible seropositive individuals, 507 (84.9%) completed the RNA test, obtaining 71.8% positives. Treatment was initiated by 327 (89.8%) of 364 viremic patients, and 315 (86.5%) completed it, resulting in a final cure rate of 79.4% (n = 289). Overall, with the introduction of antivirals in this cohort, the prevalence of viremic HCV infection dropped from 4.44% to 1.34%, yielding a 69.70% (95% credible interval 63.64%-77.03%) absolute reduction. Discussion: Although HCV prevalence varied, the care cascades achieved consistent results across townships/cities. We have further successfully implemented the model in county-wide hospital-based diabetes clinics, eventually treating 89.6% of the total PwD. A collaborative effort between diabetes care and HCV elimination enhanced the testing and treatment in PwD through an innovative shared care model.
MeSH term(s)	Humans ; Taiwan/epidemiology ; Male ; Female ; Middle Aged ; Delivery of Health Care, Integrated/organization & administration ; Aged ; Hepatitis C/epidemiology ; Hepatitis C/therapy ; Diabetes Mellitus/epidemiology ; Diabetes Mellitus/therapy ; Adult ; Primary Health Care/organization & administration ; Prevalence ; Disease Eradication/organization & administration ; Disease Eradication/methods ; Mass Screening/methods ; Mass Screening/organization & administration ; Antiviral Agents/therapeutic use ; Community Health Services/organization & administration
Chemical Substances	Antiviral Agents
Language	English
Publishing date	2023-11-17
Publishing country	United States
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	390122-1
ISSN	1572-0241 ; 0002-9270
ISSN (online)	1572-0241
ISSN	0002-9270
DOI	10.14309/ajg.0000000000002624
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Book ; Online: Escala EQUAL 2022 para Trichosporon

Sprute, Rosanne / Bethe, Ullrich / Chen, Sharon C.-A. / Cornely, Oliver Andreas / Soriano, Alex

un escala de la ECMM para medir la calidad del manejo clínico de las infecciones invasivas por Trichosporon

(EQUAL Trichosporon Scorecard)

2023

Abstract: La puntuación EQUAL Trichosporon evalúa los factores más importantes para el manejo de las infecciones invasivas por Trichosporon. Las puntuaciones reflejan las recomendaciones más firmes de las guías. Las tarjetas de puntuación son una referencia rápida ...

Institution	Universitätsklinikum Köln / Klinik I für Innere Medizin
Author's details	Rosanne Sprute, Ullrich Bethe, Sharon C.-A. Chen, Oliver A. Cornely, Alex Soriano ; Uniklinik Köln, DZIF - Deutsches Zentrum für Infektionsforschung, The University of Sydney, NSW Government - Health Pathology, ECMM - European Confederation of Medical Mycology
Series title	EQUAL Trichosporon Scorecard
Abstract	La puntuación EQUAL Trichosporon evalúa los factores más importantes para el manejo de las infecciones invasivas por Trichosporon. Las puntuaciones reflejan las recomendaciones más firmes de las guías. Las tarjetas de puntuación son una referencia rápida para medir el cumplimiento de las guías y respaldar la política de uso de antifúngicos.
Subject code	610
Language	Spanish
Size	1 Online-Ressource (2 Blätter)
Publisher	Uniklinik Köln
Publishing place	Cologne
Publishing country	Germany
Document type	Book ; Online
Note	Open Access
HBZ-ID	HT030625847
DOI	10.4126/FRL01-006472891
Database	Repository for Life Sciences

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Book ; Online: EQUAL Trichosporon Score 2022

Sprute, Rosanne / Bethe, Ullrich / Chen, Sharon C.-A. / Cornely, Oliver Andreas / Queiroz-Telles, Flavio

um Score ECMM para avaliar a QUALidade do manejo clínico das infecções invasivas por Trichosporon infections

(EQUAL Trichosporon Scorecard)

2023

Abstract: O Score EQUAL para Trichosporon mede e agrega fatores para o manejo ideal das infeções invasivas por espécies de Trichosporon. Os Scores reflem the as recomendacões mais robustas dos consensos. Os cartões de Score EQUAL são uma referência rápida para se ... ...

Institution	Universitätsklinikum Köln / Klinik I für Innere Medizin
Author's details	Rosanne Sprute, Ullrich Bethe, Sharon C.-A. Chen, Oliver A. Cornely, Flavio Queiroz-Telles ; Uniklinik Köln, DZIF - Deutsches Zentrum für Infektionsforschung, The University of Sydney, NSW Government - Health Pathology, ECMM - European Confederation of Medical Mycology
Series title	EQUAL Trichosporon Scorecard
Abstract	O Score EQUAL para Trichosporon mede e agrega fatores para o manejo ideal das infeções invasivas por espécies de Trichosporon. Os Scores reflem the as recomendacões mais robustas dos consensos. Os cartões de Score EQUAL são uma referência rápida para se avaliar a adesão e para embasar a administração padronizada de drogas antifúngicas.
Subject code	610
Language	Portuguese
Size	1 Online-Ressource (2 Blätter)
Publisher	Uniklinik Köln
Publishing place	Cologne
Publishing country	Germany
Document type	Book ; Online
Note	Open Access
HBZ-ID	HT030625798
DOI	10.4126/FRL01-006472890
Database	Repository for Life Sciences

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Book ; Online: EQUAL Trichosporon Score 2022

Sprute, Rosanne / Bethe, Ullrich / Chen, Sharon C.-A. / Cornely, Oliver Andreas / Roudbary, Maryam

an ECMM Score to measure QUALity of the clinical management of invasive Trichosporon infections

(EQUAL Trichosporon Scorecard)

2023

Abstract: The EQUAL Trichosporon Score weights and aggregates factors for ideal management of invasive trichosporon infections. Scores reflect the strongest guideline recommendations. EQUAL Score Cards reflect the strongest recommendations from current guidelines. ...

Institution	Universitätsklinikum Köln / Klinik I für Innere Medizin
Author's details	Rosanne Sprute, Ullrich Bethe, Sharon C.-A. Chen, Oliver A. Cornely, Maryam Roudbary ; Uniklinik Köln, DZIF - Deutsches Zentrum für Infektionsforschung, The University of Sydney, NSW Government - Health Pathology, ECMM - European Confederation of Medical Mycology
Series title	EQUAL Trichosporon Scorecard
Abstract	The EQUAL Trichosporon Score weights and aggregates factors for ideal management of invasive trichosporon infections. Scores reflect the strongest guideline recommendations. EQUAL Score Cards reflect the strongest recommendations from current guidelines. The Score Cards are a quick reference to measure guideline adherence and to support antifungal stewardship.
Subject code	610
Language	Persian
Size	1 Online-Ressource (2 Blätter)
Publisher	Uniklinik Köln
Publishing place	Cologne
Publishing country	Germany
Document type	Book ; Online
Note	Open Access
HBZ-ID	HT030624880
DOI	10.4126/FRL01-006472889
Database	Repository for Life Sciences

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Article ; Online: Does bleb needling augmented by mitomycin C or 5-fluorouracil share similar efficacy with no antimetabolites?

Chen, Xuhao / Hong, Ying / Zhang, Chun

Acta ophthalmologica

2020 Volume 99, Issue 5, Page(s) e772

MeSH term(s)	Antimetabolites/therapeutic use ; Fluorouracil/therapeutic use ; Humans ; Intraocular Pressure/physiology ; Mitomycin/therapeutic use ; Nucleic Acid Synthesis Inhibitors/therapeutic use ; Postoperative Complications/drug therapy ; Retrospective Studies ; Trabeculectomy/adverse effects
Chemical Substances	Antimetabolites ; Nucleic Acid Synthesis Inhibitors ; Mitomycin (50SG953SK6) ; Fluorouracil (U3P01618RT)
Language	English
Publishing date	2020-09-30
Publishing country	England
Document type	Letter
ZDB-ID	2408333-1
ISSN	1755-3768 ; 1755-375X
ISSN (online)	1755-3768
ISSN	1755-375X
DOI	10.1111/aos.14623
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Book ; Online: EQUAL トリコスポロンスコア 2022

Sprute, Rosanne / Bethe, Ullrich / Chen, Sharon C.-A. / Cornely, Oliver Andreas / Takazono, Takahiro

現行ガイドラインに基づく侵襲性トリコスポロン症マネジメント評価のための ECMM スコア

(EQUAL Trichosporon Scorecard)

2022

Abstract: EQUAL トリコスポロンスコアは侵襲性トリコスポロン症の診療に関わる因子を重み付け集計し評価したものであり、現行ガイドラインにおける強い推奨を反映しています。スコアカードは、ガイドライン遵守度や Antifungal stewardship を評価するクイック・リファレンスツールです。 ...

Title variant	EQUAL torikosuporonsukoa 2022: Genkō gaidorain ni motodzuku shinshū-sei torikosuporon-shō manejimento hyōka no tame no ECMM sukoa
Institution	Universitätsklinikum Köln / Klinik I für Innere Medizin
Author's details	Rosanne Sprute, Ullrich Bethe, Sharon C.-A. Chen, Oliver A. Cornely, Takahiro Takazono ; Uniklinik Köln, DZIF - Deutsches Zentrum für Infektionsforschung, The University of Sydney, NSW Government - Health Pathology
Series title	EQUAL Trichosporon Scorecard
Abstract	EQUAL トリコスポロンスコアは侵襲性トリコスポロン症の診療に関わる因子を重み付け集計し評価したものであり、現行ガイドラインにおける強い推奨を反映しています。スコアカードは、ガイドライン遵守度や Antifungal stewardship を評価するクイック・リファレンスツールです。
Subject code	610
Language	Japanese
Size	1 Online-Ressource (2 Blätter)
Publisher	Uniklinik Köln
Publishing place	Köln
Publishing country	Germany
Document type	Book ; Online
HBZ-ID	HT021471869
DOI	10.4126/FRL01-006402628
Database	Repository for Life Sciences

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Article ; Online: Unconventional Constituents and Shared Molecular Architecture of the Melanized Cell Wall of C. neoformans and Spore Wall of S. cerevisiae

Christine Chrissian / Coney Pei-Chen Lin / Emma Camacho / Arturo Casadevall / Aaron M. Neiman / Ruth E. Stark

Journal of Fungi, Vol 6, Iss 329, p

2020 Volume 329

Abstract: ... composed of triglycerides, which are also present in the C. neoformans melanized cell wall. Moreover ... we identify a tyrosine-derived constituent in the C. neoformans wall that, although it is not dityrosine, is ...

Abstract	The fungal cell wall serves as the interface between the cell and the environment. Fungal cell walls are composed largely of polysaccharides, primarily glucans and chitin, though in many fungi stress-resistant cell types elaborate additional cell wall structures. Here, we use solid-state nuclear magnetic resonance spectroscopy to compare the architecture of cell wall fractions isolated from Saccharomyces cerevisiae spores and Cryptococcus neoformans melanized cells. The specialized cell walls of these two divergent fungi are highly similar in composition. Both use chitosan, the deacetylated derivative of chitin, as a scaffold on which a polyaromatic polymer, dityrosine and melanin, respectively, is assembled. Additionally, we demonstrate that a previously identified but uncharacterized component of the S. cerevisiae spore wall is composed of triglycerides, which are also present in the C. neoformans melanized cell wall. Moreover, we identify a tyrosine-derived constituent in the C. neoformans wall that, although it is not dityrosine, is a non-pigment constituent of the cell wall. The similar composition of the walls of these two phylogenetically distant species suggests that triglycerides, polyaromatics, and chitosan are basic building blocks used to assemble highly stress-resistant cell walls and the use of these constituents may be broadly conserved in other fungal species.
Keywords	fungal cell wall ; solid-state NMR ; macromolecular assembly ; Saccharomyces cerevisiae ; Cryptococcus neoformans ; dityrosine ; Biology (General) ; QH301-705.5
Subject code	580
Language	English
Publishing date	2020-12-01T00:00:00Z
Publisher	MDPI AG
Document type	Article ; Online
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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Article ; Online: RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways.

Pearce, Stephen / Kippes, Nestor / Chen, Andrew / Debernardi, Juan Manuel / Dubcovsky, Jorge

BMC plant biology

2016 Volume 16, Issue 1, Page(s) 141

Abstract: Background: In cereal crops such as wheat, an optimal timing of developmental transitions is required to maximize grain yield. Many of these developmental changes are precisely regulated by changes in the duration, intensity or quality of light. ... ...

Abstract	Background: In cereal crops such as wheat, an optimal timing of developmental transitions is required to maximize grain yield. Many of these developmental changes are precisely regulated by changes in the duration, intensity or quality of light. Phytochromes are dimeric photoreceptors that absorb light maximally in the red and far-red wavelengths and induce large-scale transcriptional changes in response to variation in light quality. In wheat, PHYC is required for early flowering under long days. However, it is currently unknown whether this function requires the presence of PHYB. In this study, we characterized the role of PHYB in wheat development and used RNA-seq to analyze and compare the transcriptomes of phyB-null and phyC-null TILLING mutants. Results: Under long-day photoperiods, phyB-null plants exhibit a severe delay in flowering comparable to the delay observed in phyC-null plants. These results demonstrate that both genes are required for the induction of wheat flowering under long days. Using replicated RNA-seq studies we identified 82 genes that are significantly up or down regulated in both the phyB-null and phyC-null mutant relative to their respective wild-type controls. Among these genes are several well-characterized positive regulators of flowering, including PPD1, FT1 and VRN1. Eight-fold more genes were differentially regulated only in the phyB-null mutant (2202) than only in the phyC-null mutant (261). The PHYB-regulated genes were enriched in components of the auxin, gibberellin and brassinosteroid biosynthesis and signaling pathways, and in transcription factors with putative roles in regulating vegetative development and shade-avoidance responses. Several genes involved in abiotic stress tolerance pathways were also found to be regulated by PHYB. Conclusions: PHYB and PHYC are both required for the photoperiodic induction of wheat flowering, whereas PHYB alone regulates a large number of genes involved in hormone biosynthesis and signaling, shade-avoidance response, and abiotic stress tolerance. Our analysis provides a comprehensive overview of the PHYB- and PHYC-mediated transcriptional changes during light signaling, and an initial step towards the dissection of this regulatory gene network in wheat. This further dissection will be required to explore the individual phytochrome-mediated developmental responses and to evaluate their potential to improve wheat adaptation to changing environments.
MeSH term(s)	Flowers/genetics ; Flowers/metabolism ; Phytochrome/metabolism ; Phytochrome B/metabolism ; Plant Proteins/genetics ; Plant Proteins/metabolism ; RNA, Plant/genetics ; Signal Transduction/genetics ; Signal Transduction/physiology ; Transcription Factors/genetics ; Transcription Factors/metabolism ; Triticum/genetics ; Triticum/metabolism
Chemical Substances	Plant Proteins ; RNA, Plant ; Transcription Factors ; Phytochrome (11121-56-5) ; Phytochrome B (136250-22-1)
Language	English
Publishing date	2016-06-21
Publishing country	England
Document type	Journal Article
ISSN	1471-2229
ISSN (online)	1471-2229
DOI	10.1186/s12870-016-0831-3
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