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Article ; Online: Quarantine pathogen interceptions on crop germplasm in India during 1986 - 2010 and their possible economic impact

R D V J PRASADA RAO / K ANITHA / S K CHAKRABARTY / A G GIRISH / B SARATH BABU / K RAMEASH / BABU ABRAHAM / K S VARAPRASAD

The Indian Journal of Agricultural Sciences, Vol 82, Iss

2024 Volume 5

Abstract: The National Bureau of Plant Genetic Resources Regional Station, Hyderabad has facilitated safe introduction of 356 521 (1986â€“2010) germplasm accessions of various crops into India. About 60 seed-borne pathogens of quarantine importance were ... ...

Abstract	The National Bureau of Plant Genetic Resources Regional Station, Hyderabad has facilitated safe introduction of 356 521 (1986â€“2010) germplasm accessions of various crops into India. About 60 seed-borne pathogens of quarantine importance were intercepted on crop germplasm during seed examination in the laboratory and post-entry quarantine observations in the field. Of these, the quarantine pathogens, viz. Ralstonia solanacearum and peanut stripe virus in groundnut (Arachis hypogaea L.), Peronospora manshurica (Naum.) Syd. and peanut stripe virus in soybean [Glycine max (L.) Merr.], tobacco streak virus in sunflower (Helianthus annuus L.), Xanthomonas campestris pv holcicola (Elliot) Dye, Burkholderia andropogonis (Smith) Gillis et al. on sorghum [Sorghum bicolor (L.) Moench], Drechslera maydis (Nisik.) Subram. & Jain on maize (Zea mays L.) and Pseudomonas syringae pv tomato (Okabe) Young et al. on tomato (Lycopersicon esculentum Mill.) were intercepted from different countries. Yield losses that could have occurred were estimated had these pathogens of groundnut, soybean, sunflower, maize, sorghum and tomato not been intercepted.
Keywords	Interceptions ; Losses ; Pathogens ; Post-entry quarantine inspection ; Quarantine ; Agriculture ; S
Language	English
Publishing date	2024-01-01T00:00:00Z
Publisher	Indian Council of Agricultural Research
Document type	Article ; Online
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Article ; Online: Experimental infection of Enterocytozoon hepatopanaei parasite (EHP) of penaeid shrimp in Indian marine crabs.

Mani, Ravi / Raja, Sudhakaran / Kesavan, Karthikeyan / Vijay, Parameswaran / Babu, V Sarath / Dhas, D Stalin / Velu, Karthick

Archives of microbiology

2022 Volume 204, Issue 7, Page(s) 416

Abstract: ... d.p.i) in gills, heart, hepatopancreas, haemolymph and muscle tissue. However, after 5th d.p.i EHP ... for replicating EHP spores but crabs fecal matters are PCR positive till 5th d.p.i. Therefore, marine crabs are ...

Abstract	Enterocytozoon hepatopanaei parasite (EHP) is identified as an emerging pathogenic microsporidium parasite in shrimp culture industry. Though the etiology, disease pattern and sustainability of shrimp are well known, significantly less research has been carried out about the disease transmission and symptoms of infected aquatic animals. The present study aims is to determine the disease carrier status of five different species of Indian marine crabs (Scylla olivacea, Scylla serrata, Portunus pelagicus, Ocypode quadrata and Portunus sanquinolentus) using EHP. At the first instance, oral infection and intramuscular injection were performed to determine the susceptibility of the parasite at 50 days post-infection and it was observed that there was no mortality. The experimental infected crabs were confirmed by polymerase chain reaction, bioassay and histopathology. The crabs were EHP-PCR positive at 5th day post-infection (d.p.i) in gills, heart, hepatopancreas, haemolymph and muscle tissue. However, after 5th d.p.i EHP was PCR negative in all the tissue samples. There were no mortalities and histological changes in the negative group and experimental group. Therefore, marine crabs are found to be not suitable hosts for replicating EHP spores but crabs fecal matters are PCR positive till 5th d.p.i. Therefore, marine crabs are having the possibilities of acceptance as a vector for Enterocytozoon hepatopanaei in shrimp. Shrimp farmers need to take necessary action to control this deadly infection in shrimp ponds.
MeSH term(s)	Animals ; Brachyura ; Enterocytozoon/genetics ; Hepatopancreas ; Parasites ; Penaeidae
Language	English
Publishing date	2022-06-23
Publishing country	Germany
Document type	Journal Article
ZDB-ID	124824-8
ISSN	1432-072X ; 0302-8933
ISSN (online)	1432-072X
ISSN	0302-8933
DOI	10.1007/s00203-022-03025-2
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Article: Experimental infection of Enterocytozoon hepatopanaei parasite (EHP) of penaeid shrimp in Indian marine crabs

Mani, Ravi / Raja, Sudhakaran / Kesavan, Karthikeyan / Vijay, Parameswaran / Babu, V. Sarath / Dhas, D. Stalin / Velu, Karthick

Archives of microbiology. 2022 July, v. 204, no. 7

2022

Abstract	Enterocytozoon hepatopanaei parasite (EHP) is identified as an emerging pathogenic microsporidium parasite in shrimp culture industry. Though the etiology, disease pattern and sustainability of shrimp are well known, significantly less research has been carried out about the disease transmission and symptoms of infected aquatic animals. The present study aims is to determine the disease carrier status of five different species of Indian marine crabs (Scylla olivacea, Scylla serrata, Portunus pelagicus, Ocypode quadrata and Portunus sanquinolentus) using EHP. At the first instance, oral infection and intramuscular injection were performed to determine the susceptibility of the parasite at 50 days post-infection and it was observed that there was no mortality. The experimental infected crabs were confirmed by polymerase chain reaction, bioassay and histopathology. The crabs were EHP—PCR positive at 5th day post-infection (d.p.i) in gills, heart, hepatopancreas, haemolymph and muscle tissue. However, after 5th d.p.i EHP was PCR negative in all the tissue samples. There were no mortalities and histological changes in the negative group and experimental group. Therefore, marine crabs are found to be not suitable hosts for replicating EHP spores but crabs fecal matters are PCR positive till 5th d.p.i. Therefore, marine crabs are having the possibilities of acceptance as a vector for Enterocytozoon hepatopanaei in shrimp. Shrimp farmers need to take necessary action to control this deadly infection in shrimp ponds.
Keywords	Enterocytozoon ; Penaeidae ; Portunus pelagicus ; Scylla olivacea ; Scylla serrata ; bioassays ; carrier state ; disease transmission ; etiology ; heart ; hemolymph ; hepatopancreas ; histology ; histopathology ; industry ; intramuscular injection ; microbiology ; mortality ; muscle tissues ; parasites ; polymerase chain reaction ; shrimp ; shrimp culture
Language	English
Dates of publication	2022-07
Size	p. 416.
Publishing place	Springer Berlin Heidelberg
Document type	Article
ZDB-ID	124824-8
ISSN	1432-072X ; 0302-8933
ISSN (online)	1432-072X
ISSN	0302-8933
DOI	10.1007/s00203-022-03025-2
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Article ; Online: Label-Free detection of Poly-Cystic Ovarian Syndrome using a highly conductive 2-D rGO/MoS

Hari Gupta, Gourang / Mohan, Keerthana / Ghosh, Sumanta / Sarath Babu, Srivalliputtur / Velyutham, Ravichandiran / Kapusetti, Govinda

Bioelectrochemistry (Amsterdam, Netherlands)

2024 Volume 158, Page(s) 108681

Abstract: ... of PCOS. Herein, we have fabricated a 2-D electro conductive composites of reduced Graphene oxide (rGO ...

Abstract	Polycystic ovarian syndrome (PCOS) is an endocrinal disorder characterized by multiple tiny cysts, amenorrhea, dysmenorrhea, hirsutism, and infertility. The current diagnostic tools comprise of expensive, time-consuming ultrasonography to serological test, which have low patient compliance. To address these limitations, we have developed a highly sensitive, cost effective and ultrafast immunosensor for the diagnosis of PCOS. Herein, we have fabricated a 2-D electro conductive composites of reduced Graphene oxide (rGO), Molybdenum disulfide (MoS
Language	English
Publishing date	2024-03-14
Publishing country	Netherlands
Document type	Journal Article
ZDB-ID	2010650-6
ISSN	1878-562X ; 0302-4598 ; 1567-5394
ISSN (online)	1878-562X
ISSN	0302-4598 ; 1567-5394
DOI	10.1016/j.bioelechem.2024.108681
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Article ; Online: Protein network analyses of pulmonary endothelial cells in chronic thromboembolic pulmonary hypertension.

Nukala, Sarath Babu / Tura-Ceide, Olga / Aldini, Giancarlo / Smolders, Valérie F E D / Blanco, Isabel / Peinado, Victor I / Castellà, Manuel / Barberà, Joan Albert / Altomare, Alessandra / Baron, Giovanna / Carini, Marina / Cascante, Marta / D'Amato, Alfonsina

Scientific reports

2021 Volume 11, Issue 1, Page(s) 5583

Abstract: Chronic thromboembolic pulmonary hypertension (CTEPH) is a vascular disease characterized by the presence of organized thromboembolic material in pulmonary arteries leading to increased vascular resistance, heart failure and death. Dysfunction of ... ...

Abstract	Chronic thromboembolic pulmonary hypertension (CTEPH) is a vascular disease characterized by the presence of organized thromboembolic material in pulmonary arteries leading to increased vascular resistance, heart failure and death. Dysfunction of endothelial cells is involved in CTEPH. The present study describes for the first time the molecular processes underlying endothelial dysfunction in the development of the CTEPH. The advanced analytical approach and the protein network analyses of patient derived CTEPH endothelial cells allowed the quantitation of 3258 proteins. The 673 differentially regulated proteins were associated with functional and disease protein network modules. The protein network analyses resulted in the characterization of dysregulated pathways associated with endothelial dysfunction, such as mitochondrial dysfunction, oxidative phosphorylation, sirtuin signaling, inflammatory response, oxidative stress and fatty acid metabolism related pathways. In addition, the quantification of advanced oxidation protein products, total protein carbonyl content, and intracellular reactive oxygen species resulted increased attesting the dysregulation of oxidative stress response. In conclusion this is the first quantitative study to highlight the involvement of endothelial dysfunction in CTEPH using patient samples and by network medicine approach.
MeSH term(s)	Endothelial Cells/metabolism ; Endothelial Cells/pathology ; Humans ; Hypertension, Pulmonary/metabolism ; Hypertension, Pulmonary/pathology ; Protein Carbonylation ; Protein Interaction Maps ; Pulmonary Artery/metabolism ; Pulmonary Artery/pathology ; Pulmonary Embolism/metabolism ; Pulmonary Embolism/pathology ; Thromboembolism/metabolism ; Thromboembolism/pathology
Language	English
Publishing date	2021-03-10
Publishing country	England
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2615211-3
ISSN	2045-2322 ; 2045-2322
ISSN (online)	2045-2322
ISSN	2045-2322
DOI	10.1038/s41598-021-85004-z
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Article: Assessment of mitral valve commissural morphology by transoesophageal echocardiography predicts outcome after balloon mitral valvotomy.

Sarath Babu, D / Ranganayakulu, K P / Rajasekhar, D / Vanajakshamma, V / Pramod Kumar, T

Indian heart journal

2013 Volume 65, Issue 3, Page(s) 269–275

Abstract: Background: Balloon mitral valvotomy (BMV) is a safe and an effective treatment in patients with symptomatic rheumatic mitral stenosis. This study was conducted to validate the importance of assessing the morphology of mitral valve commissures by ... ...

Abstract	Background: Balloon mitral valvotomy (BMV) is a safe and an effective treatment in patients with symptomatic rheumatic mitral stenosis. This study was conducted to validate the importance of assessing the morphology of mitral valve commissures by transoesophageal echocardiography and thereby predicting the outcome after balloon mitral valvotomy [BMV]. Materials and methods: Study consisted of 100 patients with symptomatic mitral stenosis undergoing BMV. The Commissural Morphology and Wilkins score were assessed by transoesophageal echocardiography. Both the commissures (anterolateral and posteromedial) were scored individually according to whether non-calcified fusion was absent (0), partial (1), or extensive (2) and calcification (score 0) and combined giving an overall commissural score of 0-4. Outcome of BMV was correlated with commissural score and Wilkins score. Results: The commissural score and outcome after BMV correlated significantly. 66 of 70 patients (94%) with a commissural score of 3-4 obtained a good outcome compared with only six (20%) patients of 30 with a commissural score of 0-2 (positive and negative predictive accuracy 94% and 80%, respectively, p < 0.001). Increase in 2DMVA post BMV was more in patients with higher commissural score (score of 3-4). Wilkins score <8 usually predicts a good outcome but even in patients with Wilkins score >8 a commissural score >2 predicts a 50% chance of a good result. Conclusions: A higher commissural score predicts a good outcome after BMV hence it can be concluded that along with Wilkins score, commissural morphology and score should be assessed with TOE in patients undergoing BMV.
MeSH term(s)	Adult ; Balloon Valvuloplasty/adverse effects ; Echocardiography, Transesophageal ; Female ; Humans ; Male ; Middle Aged ; Mitral Valve/diagnostic imaging ; Mitral Valve/pathology ; Mitral Valve Insufficiency/etiology ; Mitral Valve Stenosis/diagnostic imaging ; Mitral Valve Stenosis/pathology ; Mitral Valve Stenosis/therapy ; Prognosis ; Treatment Outcome ; Young Adult
Language	English
Publishing date	2013-04-09
Publishing country	India
Document type	Journal Article
ZDB-ID	604366-5
ISSN	0019-4832
ISSN	0019-4832
DOI	10.1016/j.ihj.2013.04.022
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Article ; Online: Protein network analyses of pulmonary endothelial cells in chronic thromboembolic pulmonary hypertension

Sarath Babu Nukala / Olga Tura-Ceide / Giancarlo Aldini / Valérie F. E. D. Smolders / Isabel Blanco / Victor I. Peinado / Manuel Castellà / Joan Albert Barberà / Alessandra Altomare / Giovanna Baron / Marina Carini / Marta Cascante / Alfonsina D’Amato

Scientific Reports, Vol 11, Iss 1, Pp 1-

2021 Volume 13

Abstract: Abstract Chronic thromboembolic pulmonary hypertension (CTEPH) is a vascular disease characterized by the presence of organized thromboembolic material in pulmonary arteries leading to increased vascular resistance, heart failure and death. Dysfunction ... ...

Abstract	Abstract Chronic thromboembolic pulmonary hypertension (CTEPH) is a vascular disease characterized by the presence of organized thromboembolic material in pulmonary arteries leading to increased vascular resistance, heart failure and death. Dysfunction of endothelial cells is involved in CTEPH. The present study describes for the first time the molecular processes underlying endothelial dysfunction in the development of the CTEPH. The advanced analytical approach and the protein network analyses of patient derived CTEPH endothelial cells allowed the quantitation of 3258 proteins. The 673 differentially regulated proteins were associated with functional and disease protein network modules. The protein network analyses resulted in the characterization of dysregulated pathways associated with endothelial dysfunction, such as mitochondrial dysfunction, oxidative phosphorylation, sirtuin signaling, inflammatory response, oxidative stress and fatty acid metabolism related pathways. In addition, the quantification of advanced oxidation protein products, total protein carbonyl content, and intracellular reactive oxygen species resulted increased attesting the dysregulation of oxidative stress response. In conclusion this is the first quantitative study to highlight the involvement of endothelial dysfunction in CTEPH using patient samples and by network medicine approach.
Keywords	Medicine ; R ; Science ; Q
Language	English
Publishing date	2021-03-01T00:00:00Z
Publisher	Nature Portfolio
Document type	Article ; Online
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Article ; Online: Proteome profile of telencephalon associates attenuated neurogenesis with chronic stress induced mood disorder phenotypes in zebrafish model.

Reddy, Bommana Raghunath / Babu, Nukala Sarath / Das, Tapatee / Bhattacharya, Dwaipayan / Murthy, Ch Lakshmi N / Kumar, Arvind / Idris, Mohammed M / Chakravarty, Sumana

Pharmacology, biochemistry, and behavior

2021 Volume 204, Page(s) 173170

Abstract: Debilitating mental illness like depression and related mood disorders is due to the disruption in circuitry that controls emotion, motivation, and reward, characterized by disparate phenotypes like decrease in socialization, motivation, threshold for ... ...

Abstract	Debilitating mental illness like depression and related mood disorders is due to the disruption in circuitry that controls emotion, motivation, and reward, characterized by disparate phenotypes like decrease in socialization, motivation, threshold for threat apprehension, etc. Chronic stress is a major factor in the etiology of these disorders. Here, using a chronic unpredictable stress (CUS) paradigm the characterization of an array of mood disorder phenotypes in adult zebrafish, in comparison to normal control unstressed fish, was achieved using a battery of behavioral assays including novel ones comprising social interaction test, feed approach test, threat response test and novel tank test. For the predictive validity of the model for mood disorders, the mitigative role of a slow (imipramine) and fast (ketamine) acting antidepressant was assessed. The molecular changes associated with CUS-induced mood disorder phenotype was investigated utilizing a high throughput method called isobaric tag for relative and absolute quantification (iTRAQ) in telencephalon, the region critically associated with the processing of emotional information in the fish brain. Out of 222 proteins identified to be significantly altered, 58 were differentially expressed across the stress and antidepressant-treatment groups at more than one fold (in log2) change. Of these proteins, some were implicated in earlier studies on mood disorders such as CABP1, PER2, mTOR, etc. The enrichment of altered proteins by Ingenuity Pathway Analysis (IPA) led us to mTOR and opioid signaling pathways, the top canonical pathways affected in the fish telencephalon. Interestingly, most of the pathways affected converge at the one controlling cell proliferation thus indicating altered neurogenesis, which was validated using immunohistochemistry for cell proliferation markers BrdU, SOX2, and BLBP. The study concludes that molecules that regulate telencephalon neural progenitor cell proliferation or neurogenesis are crucially involved in chronic stress-induced mood disorders by affecting the circuitry that controls emotion and reward.
MeSH term(s)	Affect/drug effects ; Animals ; Antidepressive Agents/pharmacology ; Anxiety/metabolism ; Cell Proliferation/drug effects ; Depression/metabolism ; Disease Models, Animal ; Female ; Imipramine/pharmacology ; Ketamine/pharmacology ; Male ; Mood Disorders/drug therapy ; Mood Disorders/metabolism ; Neurogenesis/drug effects ; Phenotype ; Proteome/metabolism ; Stress, Psychological/metabolism ; Telencephalon/metabolism ; Zebrafish
Chemical Substances	Antidepressive Agents ; Proteome ; Ketamine (690G0D6V8H) ; Imipramine (OGG85SX4E4)
Language	English
Publishing date	2021-03-05
Publishing country	United States
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	191042-5
ISSN	1873-5177 ; 0091-3057
ISSN (online)	1873-5177
ISSN	0091-3057
DOI	10.1016/j.pbb.2021.173170
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Article ; Online: Glucogallin Attenuates the LPS-Induced Signaling in Macrophages and Protects Mice against Sepsis.

Singh, Rajveer / Chandel, Shivani / Ghosh, Arijit / Matta, Tushar / Gautam, Anupam / Bhattacharya, Arka / Babu, Srivalliputturu Sarath / Sukla, Soumi / Nag, Debasish / Ravichandiran, Velayutham / Roy, Syamal / Ghosh, Dipanjan

International journal of molecular sciences

2022 Volume 23, Issue 19

Abstract: The anti-oxidant and anti-inflammatory effect of beta-glucogallin (BGG), a plant-derived natural product, was evaluated in both in vitro and in vivo studies. For the in vitro study, the ability of BGG pre-treatment to quench LPS-induced effects compared ... ...

Abstract	The anti-oxidant and anti-inflammatory effect of beta-glucogallin (BGG), a plant-derived natural product, was evaluated in both in vitro and in vivo studies. For the in vitro study, the ability of BGG pre-treatment to quench LPS-induced effects compared to LPS alone in macrophages was investigated. It was found that BGG pre-treatment showed a significant decrease in ROS, NO, superoxide, and pro-inflammatory cytokines (TNF-alpha, IL-4, IL-17, IL-1β, and IL-6) and increased reduced glutathione coupled with the restoration of mitochondrial membrane potential. Gene profiling and further validation by qPCR showed that BGG pre-treatment downregulated the LPS-induced expression of c-Fos, Fas, MMP-9, iNOS, COX-2, MyD88, TRIF, TRAF6, TRAM, c-JUN, and NF-κB. We observed that BGG pre-treatment reduced nuclear translocation of LPS-activated NF-κB and thus reduced the subsequent expressions of NLRP3 and IL-1β, indicating the ability of BGG to inhibit inflammasome formation. Molecular docking studies showed that BGG could bind at the active site of TLR4. Finally, in the LPS-driven sepsis mouse model, we showed that pre-treatment with BGG sustained toxic shock, as evident from their 100% survival. Our study clearly showed the therapeutic potential of BGG in toxic shock syndrome.
MeSH term(s)	Adaptor Proteins, Vesicular Transport/metabolism ; Animals ; Anti-Inflammatory Agents/adverse effects ; Antioxidants/pharmacology ; Biological Products/pharmacology ; Cyclooxygenase 2/metabolism ; Cytokines/metabolism ; Glutathione/metabolism ; Hydrolyzable Tannins ; Inflammasomes/metabolism ; Interleukin-17/metabolism ; Interleukin-4/metabolism ; Interleukin-6/metabolism ; Lipopolysaccharides/adverse effects ; Macrophages/metabolism ; Matrix Metalloproteinase 9/metabolism ; Mice ; Molecular Docking Simulation ; Myeloid Differentiation Factor 88/metabolism ; NF-kappa B/metabolism ; NLR Family, Pyrin Domain-Containing 3 Protein/metabolism ; Reactive Oxygen Species/metabolism ; Sepsis/metabolism ; Superoxides/metabolism ; TNF Receptor-Associated Factor 6/metabolism ; Toll-Like Receptor 4/metabolism ; Tumor Necrosis Factor-alpha/metabolism
Chemical Substances	Adaptor Proteins, Vesicular Transport ; Anti-Inflammatory Agents ; Antioxidants ; Biological Products ; Cytokines ; Hydrolyzable Tannins ; Inflammasomes ; Interleukin-17 ; Interleukin-6 ; Lipopolysaccharides ; Myeloid Differentiation Factor 88 ; NF-kappa B ; NLR Family, Pyrin Domain-Containing 3 Protein ; Reactive Oxygen Species ; TNF Receptor-Associated Factor 6 ; Toll-Like Receptor 4 ; Tumor Necrosis Factor-alpha ; Superoxides (11062-77-4) ; Interleukin-4 (207137-56-2) ; glucogallin (58511-73-2) ; Cyclooxygenase 2 (EC 1.14.99.1) ; Matrix Metalloproteinase 9 (EC 3.4.24.35) ; Glutathione (GAN16C9B8O)
Language	English
Publishing date	2022-09-24
Publishing country	Switzerland
Document type	Journal Article
ZDB-ID	2019364-6
ISSN	1422-0067 ; 1422-0067 ; 1661-6596
ISSN (online)	1422-0067
ISSN	1422-0067 ; 1661-6596
DOI	10.3390/ijms231911254
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Article ; Online: An unusual case of native tricuspid valve endocarditis and sepsis in a child with structurally normal heart mimicking bronchopneumonia

D. Rajasekhar / V. Vanajakshamma / C. Shashanka / M.L. Srinivas Kumar / D. Sarath Babu

Journal of Clinical and Scientific Research, Vol 1, Iss 2, Pp 97-

2012 Volume 100

Abstract: Right sided infectious endocarditis (IE) by involvement of tricuspid valve is mainly associated with cardiac malformations or intravenous drug use. Occurrence of right-sided IE in children with structurally normal heart is exceptionallyrare. We report ... ...

Abstract	Right sided infectious endocarditis (IE) by involvement of tricuspid valve is mainly associated with cardiac malformations or intravenous drug use. Occurrence of right-sided IE in children with structurally normal heart is exceptionallyrare. We report the case of 9-year-old child presenting with bronchopneumonia and septicaemia who was diagnosed to have native tricuspid valve staphylococcal endocarditis and was successfully treated.
Keywords	Tricuspid valve endocarditis ; Native valve endocarditis ; Endocarditis in children ; Medicine ; R
Language	English
Publishing date	2012-04-01T00:00:00Z
Publisher	Wolters Kluwer Medknow Publications
Document type	Article ; Online
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