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Article ; Online: Automated tumor segmentation in thermographic breast images.

Trongtirakul, Thaweesak / Agaian, Sos / Oulefki, Adel

Mathematical biosciences and engineering : MBE

2023 Volume 20, Issue 9, Page(s) 16786–16806

Abstract: Identifying and delineating suspicious regions in thermal breast images poses significant challenges for radiologists during the examination and interpretation of thermogram images. This paper aims to tackle concerns related to enhancing the ... ...

Abstract	Identifying and delineating suspicious regions in thermal breast images poses significant challenges for radiologists during the examination and interpretation of thermogram images. This paper aims to tackle concerns related to enhancing the differentiation between cancerous regions and the background to achieve uniformity in the intensity of breast cancer's (BC) existence. Furthermore, it aims to effectively segment tumors that exhibit limited contrast with the background and extract relevant features that can distinguish tumors from the surrounding tissue. A new cancer segmentation scheme comprised of two primary stages is proposed to tackle these challenges. In the first stage, an innovative image enhancement technique based on local image enhancement with a hyperbolization function is employed to significantly improve the quality and contrast of breast imagery. This technique enhances the local details and edges of the images while preserving global brightness and contrast. In the second stage, a dedicated algorithm based on an image-dependent weighting strategy is employed to accurately segment tumor regions within the given images. This algorithm assigns different weights to different pixels based on their similarity to the tumor region and uses a thresholding method to separate the tumor from the background. The proposed enhancement and segmentation methods were evaluated using the Database for Mastology Research (DMR-IR). The experimental results demonstrate remarkable performance, with an average segmentation accuracy, sensitivity, and specificity coefficient values of 97%, 80%, and 99%, respectively. These findings convincingly establish the superiority of the proposed method over state-of-the-art techniques. The obtained results demonstrate the potential of the proposed method to aid in the early detection of breast cancer through improved diagnosis and interpretation of thermogram images.
MeSH term(s)	Humans ; Female ; Breast/diagnostic imaging ; Breast Neoplasms/diagnosis ; Algorithms ; Image Enhancement/methods ; Image Interpretation, Computer-Assisted/methods
Language	English
Publishing date	2023-10-18
Publishing country	United States
Document type	Journal Article
ZDB-ID	2265126-3
ISSN	1551-0018 ; 1551-0018
ISSN (online)	1551-0018
ISSN	1551-0018
DOI	10.3934/mbe.2023748
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article: Tumor Lung Visualization and Localization through Virtual Reality and Thermal Feedback Interface.

Benbelkacem, Samir / Zenati-Henda, Nadia / Zerrouki, Nabil / Oulefki, Adel / Agaian, Sos / Masmoudi, Mostefa / Bentaleb, Ahmed / Liew, Alex

Diagnostics (Basel, Switzerland)

2023 Volume 13, Issue 3

Abstract: The World Health Organization estimates that there were around 10 million deaths due to cancer in 2020, and lung cancer was the most common type of cancer, with over 2.2 million new cases and 1.8 million deaths. While there have been advances in the ... ...

Abstract	The World Health Organization estimates that there were around 10 million deaths due to cancer in 2020, and lung cancer was the most common type of cancer, with over 2.2 million new cases and 1.8 million deaths. While there have been advances in the diagnosis and prediction of lung cancer, there is still a need for new, intelligent methods or diagnostic tools to help medical professionals detect the disease. Since it is currently unable to detect at an early stage, speedy detection and identification are crucial because they can increase a patient's chances of survival. This article focuses on developing a new tool for diagnosing lung tumors and providing thermal touch feedback using virtual reality visualization and thermal technology. This tool is intended to help identify and locate tumors and measure the size and temperature of the tumor surface. The tool uses data from CT scans to create a virtual reality visualization of the lung tissue and includes a thermal display incorporated into a haptic device. The tool is also tested by touching virtual tumors in a virtual reality application. On the other hand, thermal feedback could be used as a sensory substitute or adjunct for visual or tactile feedback. The experimental results are evaluated with the performance comparison of different algorithms and demonstrate that the proposed thermal model is effective. The results also show that the tool can estimate the characteristics of tumors accurately and that it has the potential to be used in a virtual reality application to "touch" virtual tumors. In other words, the results support the use of the tool for diagnosing lung tumors and providing thermal touch feedback using virtual reality visualization, force, and thermal technology.
Language	English
Publishing date	2023-02-03
Publishing country	Switzerland
Document type	Journal Article
ZDB-ID	2662336-5
ISSN	2075-4418
ISSN	2075-4418
DOI	10.3390/diagnostics13030567
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article: Detection and analysis of deteriorated areas in solar PV modules using unsupervised sensing algorithms and 3D augmented reality.

Oulefki, Adel / Himeur, Yassine / Trongtirakul, Thaweesak / Amara, Kahina / Agaian, Sos / Benbelkacem, Samir / Guerroudji, Mohamed Amine / Zemmouri, Mohamed / Ferhat, Sahla / Zenati, Nadia / Atalla, Shadi / Mansoor, Wathiq

Heliyon

2024 Volume 10, Issue 6, Page(s) e27973

Abstract: Solar Photovoltaic (PV) systems are increasingly vital for enhancing energy security worldwide. However, their efficiency and power output can be significantly reduced by hotspots and snail trails, predominantly caused by cracks in PV modules. This ... ...

Abstract	Solar Photovoltaic (PV) systems are increasingly vital for enhancing energy security worldwide. However, their efficiency and power output can be significantly reduced by hotspots and snail trails, predominantly caused by cracks in PV modules. This article introduces a novel methodology for the automatic segmentation and analysis of such anomalies, utilizing unsupervised sensing algorithms coupled with 3D Augmented Reality (AR) for enhanced visualization. The methodology outperforms existing segmentation techniques, including Weka and the Meta Segment Anything Model (SAM), as demonstrated through computer simulations. These simulations were conducted using the Cali-Thermal Solar Panels and Solar Panel Infrared Image Datasets, with evaluation metrics such as the Jaccard Index, Dice Coefficient, Precision, and Recall, achieving scores of 0.76, 0.82, 0.90, 0.99, and 0.76, respectively. By integrating drone technology, the proposed approach aims to revolutionize PV maintenance by facilitating real-time, automated solar panel detection. This advancement promises substantial cost reductions, heightened energy production, and improved performance of solar PV installations. Furthermore, the innovative integration of unsupervised sensing algorithms with 3D AR visualization opens new avenues for future research and development in the field of solar PV maintenance.
Language	English
Publishing date	2024-03-16
Publishing country	England
Document type	Journal Article
ZDB-ID	2835763-2
ISSN	2405-8440
ISSN	2405-8440
DOI	10.1016/j.heliyon.2024.e27973
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Article: Automatic COVID-19 lung infected region segmentation and measurement using CT-scans images.

Oulefki, Adel / Agaian, Sos / Trongtirakul, Thaweesak / Kassah Laouar, Azzeddine

Pattern recognition

2020 Volume 114, Page(s) 107747

Abstract: History shows that the infectious disease (COVID-19) can stun the world quickly, causing massive losses to health, resulting in a profound impact on the lives of billions of people, from both a safety and an economic perspective, for controlling the ... ...

Abstract	History shows that the infectious disease (COVID-19) can stun the world quickly, causing massive losses to health, resulting in a profound impact on the lives of billions of people, from both a safety and an economic perspective, for controlling the COVID-19 pandemic. The best strategy is to provide early intervention to stop the spread of the disease. In general, Computer Tomography (CT) is used to detect tumors in pneumonia, lungs, tuberculosis, emphysema, or other pleura (the membrane covering the lungs) diseases. Disadvantages of CT imaging system are: inferior soft tissue contrast compared to MRI as it is X-ray-based Radiation exposure. Lung CT image segmentation is a necessary initial step for lung image analysis. The main challenges of segmentation algorithms exaggerated due to intensity in-homogeneity, presence of artifacts, and closeness in the gray level of different soft tissue. The goal of this paper is to design and evaluate an automatic tool for automatic COVID-19 Lung Infection segmentation and measurement using chest CT images. The extensive computer simulations show better efficiency and flexibility of this end-to-end learning approach on CT image segmentation with image enhancement comparing to the state of the art segmentation approaches, namely GraphCut, Medical Image Segmentation (MIS), and Watershed. Experiments performed on COVID-CT-Dataset containing (275) CT scans that are positive for COVID-19 and new data acquired from the EL-BAYANE center for Radiology and Medical Imaging. The means of statistical measures obtained using the accuracy, sensitivity, F-measure, precision, MCC, Dice, Jacquard, and specificity are 0.98, 0.73, 0.71, 0.73, 0.71, 0.71, 0.57, 0.99 respectively; which is better than methods mentioned above. The achieved results prove that the proposed approach is more robust, accurate, and straightforward.
Keywords	covid19
Language	English
Publishing date	2020-11-02
Publishing country	England
Document type	Journal Article
ZDB-ID	1466343-0
ISSN	0031-3203
ISSN	0031-3203
DOI	10.1016/j.patcog.2020.107747
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article ; Online: Tumor Lung Visualization and Localization through Virtual Reality and Thermal Feedback Interface

Samir Benbelkacem / Nadia Zenati-Henda / Nabil Zerrouki / Adel Oulefki / Sos Agaian / Mostefa Masmoudi / Ahmed Bentaleb / Alex Liew

Diagnostics, Vol 13, Iss 567, p

2023 Volume 567

Abstract	The World Health Organization estimates that there were around 10 million deaths due to cancer in 2020, and lung cancer was the most common type of cancer, with over 2.2 million new cases and 1.8 million deaths. While there have been advances in the diagnosis and prediction of lung cancer, there is still a need for new, intelligent methods or diagnostic tools to help medical professionals detect the disease. Since it is currently unable to detect at an early stage, speedy detection and identification are crucial because they can increase a patient’s chances of survival. This article focuses on developing a new tool for diagnosing lung tumors and providing thermal touch feedback using virtual reality visualization and thermal technology. This tool is intended to help identify and locate tumors and measure the size and temperature of the tumor surface. The tool uses data from CT scans to create a virtual reality visualization of the lung tissue and includes a thermal display incorporated into a haptic device. The tool is also tested by touching virtual tumors in a virtual reality application. On the other hand, thermal feedback could be used as a sensory substitute or adjunct for visual or tactile feedback. The experimental results are evaluated with the performance comparison of different algorithms and demonstrate that the proposed thermal model is effective. The results also show that the tool can estimate the characteristics of tumors accurately and that it has the potential to be used in a virtual reality application to “touch” virtual tumors. In other words, the results support the use of the tool for diagnosing lung tumors and providing thermal touch feedback using virtual reality visualization, force, and thermal technology.
Keywords	virtual reality (VR) ; thermal model ; thermal sensation ; tumor localization ; Medicine (General) ; R5-920
Subject code	629
Language	English
Publishing date	2023-02-01T00:00:00Z
Publisher	MDPI AG
Document type	Article ; Online
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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Article: COVI

Benbelkacem, Samir / Oulefki, Adel / Agaian, Sos / Zenati-Henda, Nadia / Trongtirakul, Thaweesak / Aouam, Djamel / Masmoudi, Mostefa / Zemmouri, Mohamed

Diagnostics (Basel, Switzerland)

2022 Volume 12, Issue 3

Abstract: Recently many studies have shown the effectiveness of using augmented reality (AR) and virtual reality (VR) in biomedical image analysis. However, they are not automating the COVID level classification process. Additionally, even with the high potential ... ...

Abstract	Recently many studies have shown the effectiveness of using augmented reality (AR) and virtual reality (VR) in biomedical image analysis. However, they are not automating the COVID level classification process. Additionally, even with the high potential of CT scan imagery to contribute to research and clinical use of COVID-19 (including two common tasks in lung image analysis: segmentation and classification of infection regions), publicly available data-sets are still a missing part in the system care for Algerian patients. This article proposes designing an automatic VR and AR platform for the severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) pandemic data analysis, classification, and visualization to address the above-mentioned challenges including (1) utilizing a novel automatic CT image segmentation and localization system to deliver critical information about the shapes and volumes of infected lungs, (2) elaborating volume measurements and lung voxel-based classification procedure, and (3) developing an AR and VR user-friendly three-dimensional interface. It also centered on developing patient questionings and medical staff qualitative feedback, which led to advances in scalability and higher levels of engagement/evaluations. The extensive computer simulations on CT image classification show a better efficiency against the state-of-the-art methods using a COVID-19 dataset of 500 Algerian patients. The developed system has been used by medical professionals for better and faster diagnosis of the disease and providing an effective treatment plan more accurately by using real-time data and patient information.
Language	English
Publishing date	2022-03-07
Publishing country	Switzerland
Document type	Journal Article
ZDB-ID	2662336-5
ISSN	2075-4418
ISSN	2075-4418
DOI	10.3390/diagnostics12030649
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article ; Online: Automatic COVID-19 lung infected region segmentation and measurement using CT-scans images

Oulefki, Adel / Agaian, Sos / Trongtirakul, Thaweesak / Kassah Laouar, Azzeddine

Pattern Recognition

2020 , Page(s) 107747

Keywords	Signal Processing ; Software ; Artificial Intelligence ; Computer Vision and Pattern Recognition ; covid19
Language	English
Publisher	Elsevier BV
Publishing country	us
Document type	Article ; Online
ZDB-ID	1466343-0
ISSN	0031-3203
ISSN	0031-3203
DOI	10.1016/j.patcog.2020.107747
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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Article ; Online: COVI 3 D

Samir Benbelkacem / Adel Oulefki / Sos Agaian / Nadia Zenati-Henda / Thaweesak Trongtirakul / Djamel Aouam / Mostefa Masmoudi / Mohamed Zemmouri

Diagnostics, Vol 12, Iss 649, p

Automatic COVID-19 CT Image-Based Classification and Visualization Platform Utilizing Virtual and Augmented Reality Technologies

2022 Volume 649

Abstract	Recently many studies have shown the effectiveness of using augmented reality (AR) and virtual reality (VR) in biomedical image analysis. However, they are not automating the COVID level classification process. Additionally, even with the high potential of CT scan imagery to contribute to research and clinical use of COVID-19 (including two common tasks in lung image analysis: segmentation and classification of infection regions), publicly available data-sets are still a missing part in the system care for Algerian patients. This article proposes designing an automatic VR and AR platform for the severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) pandemic data analysis, classification, and visualization to address the above-mentioned challenges including (1) utilizing a novel automatic CT image segmentation and localization system to deliver critical information about the shapes and volumes of infected lungs, (2) elaborating volume measurements and lung voxel-based classification procedure, and (3) developing an AR and VR user-friendly three-dimensional interface. It also centered on developing patient questionings and medical staff qualitative feedback, which led to advances in scalability and higher levels of engagement/evaluations. The extensive computer simulations on CT image classification show a better efficiency against the state-of-the-art methods using a COVID-19 dataset of 500 Algerian patients. The developed system has been used by medical professionals for better and faster diagnosis of the disease and providing an effective treatment plan more accurately by using real-time data and patient information.
Keywords	3D COVID-19 visualization ; voxel-based classification ; double logarithmic entropy-based segmentation ; virtual reality (VR) ; augmented reality (AR) ; Medicine (General) ; R5-920
Subject code	004
Language	English
Publishing date	2022-03-01T00:00:00Z
Publisher	MDPI AG
Document type	Article ; Online
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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Article: Virtual Reality visualization for computerized COVID-19 lesion segmentation and interpretation.

Oulefki, Adel / Agaian, Sos / Trongtirakul, Thaweesak / Benbelkacem, Samir / Aouam, Djamel / Zenati-Henda, Nadia / Abdelli, Mohamed-Lamine

Biomedical signal processing and control

2021 Volume 73, Page(s) 103371

Abstract: Coronavirus disease (COVID-19) is a severe infectious disease that causes respiratory illness and has had devastating medical and economic consequences globally. Therefore, early, and precise diagnosis is critical to control disease progression and ... ...

Abstract	Coronavirus disease (COVID-19) is a severe infectious disease that causes respiratory illness and has had devastating medical and economic consequences globally. Therefore, early, and precise diagnosis is critical to control disease progression and management. Compared to the very popular RT-PCR (reverse-transcription polymerase chain reaction) method, chest CT imaging is a more consistent, sensible, and fast approach for identifying and managing infected COVID-19 patients, specifically in the epidemic area. CT images use computational methods to combine 2D X-ray images and transform them into 3D images. One major drawback of CT scans in diagnosing COVID-19 is creating false-negative effects, especially early infection. This article aims to combine novel CT imaging tools and Virtual Reality (VR) technology and generate an automatize system for accurately screening COVID-19 disease and navigating 3D visualizations of medical scenes. The key benefits of this system are a) it offers stereoscopic depth perception, b) give better insights and comprehension into the overall imaging data, c) it allows doctors to visualize the 3D models, manipulate them, study the inside 3D data, and do several kinds of measurements, and finally d) it has the capacity of real-time interactivity and accurately visualizes dynamic 3D volumetric data. The tool provides novel visualizations for medical practitioners to identify and analyze the change in the shape of COVID-19 infectious. The second objective of this work is to generate, the first time, the CT African patient COVID-19 scan datasets containing 224 patients positive for an infection and 70 regular patients CT-scan images. Computer simulations demonstrate that the proposed method's effectiveness comparing with state-of-the-art baselines methods. The results have also been evaluated with medical professionals. The developed system could be used for medical education professional training and a telehealth VR platform.
Language	English
Publishing date	2021-11-24
Publishing country	England
Document type	Journal Article
ZDB-ID	2241886-6
ISSN	1746-8108 ; 1746-8094
ISSN (online)	1746-8108
ISSN	1746-8094
DOI	10.1016/j.bspc.2021.103371
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Article: Automatic COVID-19 Lung Infected Region Segmentation and Measurement Using CT-Scans Images

Oulefki, Adel / Agaian, Sos / Trongtirakul, Thaweesak / Kassah Laouar, Azzeddine

Pattern Recognit

Abstract	History shows that the infectious disease (COVID-19) can stun the world quickly, causing massive losses to health, resulting in a profound impact on the lives of billions of people, from both a safety and an economic perspective, for controlling the COVID-19 pandemic. The best strategy is to provide early intervention to stop the spread of the disease. In general, Computer Tomography (CT) is used to detect tumors in pneumonia, lungs, tuberculosis, emphysema, or other pleura (the membrane covering the lungs) diseases. Disadvantages of CT imaging system are: inferior soft tissue contrast compared to MRI as it is X-ray-based Radiation exposure. Lung CT image segmentation is a necessary initial step for lung image analysis. The main challenges of segmentation algorithms exaggerated due to intensity in-homogeneity, presence of artifacts, and closeness in the gray level of different soft tissue. The goal of this paper is to design and evaluate an automatic tool for automatic COVID-19 Lung Infection segmentation and measurement using chest CT images. The extensive computer simulations show better efficiency and flexibility of this end-to-end learning approach on CT image segmentation with image enhancement comparing to the state of the art segmentation approaches, namely GraphCut, Medical Image Segmentation (MIS), and Watershed. Experiments performed on COVID-CT-Dataset containing (275) CT scans that are positive for COVID-19 and new data acquired from the EL-BAYANE center for Radiology and Medical Imaging. The means of statistical measures obtained using the accuracy, sensitivity, F-measure, precision, MCC, Dice, Jacquard, and specificity are 0.98 , 0.73 , 0.71 , 0.73 , 0.71 , 0.71 , 0.57 , 0.99 respectively; which is better than methods mentioned above. The achieved results prove that the proposed approach is more robust, accurate, and straightforward.
Keywords	covid19
Publisher	WHO
Document type	Article
Note	WHO #Covidence: #899401
Database	COVID19

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