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  1. Article ; Online: A RRKM study and a DFT assessment on gas-phase fragmentation of formamide-M(2+) (M = Ca, Sr).

    Martín-Sómer, Ana / Gaigeot, Marie-Pierre / Yáñez, Manuel / Spezia, Riccardo

    Physical chemistry chemical physics : PCCP

    2014  Volume 16, Issue 28, Page(s) 14813–14825

    Abstract: A kinetic study of the unimolecular reactivity of formamide-M(2+) (M = Ca, Sr) systems was carried ... out by means of RRKM statistical theory using high-level DFT. The results predict M(2+), [M(NH2 ... to produce [M(NH3)](2+) and CO, for high values of internal energy. In this framework, we also evaluated ...

    Abstract A kinetic study of the unimolecular reactivity of formamide-M(2+) (M = Ca, Sr) systems was carried out by means of RRKM statistical theory using high-level DFT. The results predict M(2+), [M(NH2)](+) and [HCO](+) as the main products, together with an intermediate that could eventually evolve to produce [M(NH3)](2+) and CO, for high values of internal energy. In this framework, we also evaluated the influence of the external rotational energy on the reaction rate constants. In order to find a method to perform reliable electronic structure calculations for formamide-M(2+) (M = Ca, Sr) at a relatively low computational cost, an assessment of different methods was performed. In the first assessment twenty-one functionals, belonging to different DFT categories, and an MP2 wave function method using a small basis set were evaluated. CCSD(T)/cc-pWCVTZ single point calculations were used as reference. A second assessment has been performed on geometries and energies. We found BLYP/6-31G(d) and G96LYP/6-31+G(d,p) as the best performing methods, for formamide-Ca(2+) and formamide-Sr(2+), respectively. Furthermore, a detailed assessment was done on RRKM reactivity and G96LYP/6-31G(d) provided results in agreement with higher level calculations. The combination of geometrical, energetics and kinetics (RRKM) criteria to evaluate DFT functionals is rather unusual and provides an original assessment procedure. Overall, we suggest using G96LYP as the best performing functional with a small basis set for both systems.
    MeSH term(s) Calcium/chemistry ; Formamides/chemistry ; Gases/chemistry ; Kinetics ; Models, Statistical ; Quantum Theory ; Strontium/chemistry
    Chemical Substances Formamides ; Gases ; formamide (4781T907ZS) ; Calcium (SY7Q814VUP) ; Strontium (YZS2RPE8LE)
    Language English
    Publishing date 2014-07-28
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1476244-4
    ISSN 1463-9084 ; 1463-9076
    ISSN (online) 1463-9084
    ISSN 1463-9076
    DOI 10.1039/c4cp01756k
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: A review on LED technology in water photodisinfection.

    Martín-Sómer, Miguel / Pablos, Cristina / Adán, Cristina / van Grieken, Rafael / Marugán, Javier

    The Science of the total environment

    2023  Volume 885, Page(s) 163963

    Abstract: The increase in efficiency achieved by UV LED devices has led to a compelling increase in research reports on UV LED water treatment for consumption in the past few years. This paper presents an in-depth review based on recent studies on the suitability ... ...

    Abstract The increase in efficiency achieved by UV LED devices has led to a compelling increase in research reports on UV LED water treatment for consumption in the past few years. This paper presents an in-depth review based on recent studies on the suitability and performance of UV LED-driven processes for water disinfection. The effect of different UV wavelengths and their combinations was analysed for the inactivation of various microorganisms and the inhibition of repair mechanisms. Whereas 265 nm UVC LED present a higher DNA damaging potential, 280 nm radiation is reported to repress photoreactivation and dark repair. No synergistic effects have been proved to exist when coupling UVB + UVC whereas sequential UVA-UVC radiation seemed to enhance inactivation. Benefits of pulsed over continuous radiation in terms of germicidal effects and energy consumption were also analysed, but with inconclusive results. However, pulsed radiation may be promising for improving thermal management. As a challenge, the use of UV LED sources introduces significant inhomogeneities in the light distribution, pushing for the development of adequate simulation methods to ensure that the minimum target dose required for the target microbes is achieved. Concerning energy consumption, selecting the optimal wavelength of the UV LED needs a compromise between the quantum efficiency of the process and the electricity-to-photon conversion. The expected development of the UV LED industry in the next few years points to UVC LED as a promising technology for water disinfection at a large scale that could be competitive in the market in the near future.
    MeSH term(s) DNA ; Disinfection/methods ; Ultraviolet Rays ; Water Purification/methods
    Chemical Substances DNA (9007-49-2)
    Language English
    Publishing date 2023-05-04
    Publishing country Netherlands
    Document type Journal Article ; Review
    ZDB-ID 121506-1
    ISSN 1879-1026 ; 0048-9697
    ISSN (online) 1879-1026
    ISSN 0048-9697
    DOI 10.1016/j.scitotenv.2023.163963
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Variations in age structure and growth in congeners Lacerta viridis and Lacerta media.

    Altunışık, Abdullah / Yıldız, Mehmet Zülfü / Akman, Bahadır / İğci, Naşit / Karış, Mert / Sömer, Mehtap

    Anatomical record (Hoboken, N.J. : 2007)

    2022  Volume 306, Issue 3, Page(s) 527–536

    Abstract: Determining the age of any species allows it to be analyzed from the ontogenetic, demographic, and ecological perspectives. In the present study, we tested the hypothesis that the age structure of congener species (Lacerta media and Lacerta viridis) with ...

    Abstract Determining the age of any species allows it to be analyzed from the ontogenetic, demographic, and ecological perspectives. In the present study, we tested the hypothesis that the age structure of congener species (Lacerta media and Lacerta viridis) with the same ecological niche may vary in different areas. In this context, we applied skeletochronology method to reveal various demographic parameters, such as age structure, longevity, age at sexual maturity, growth rate, survival rate, adult life expectancy, and the relationship between age and body size in the green lizard, L. viridis, and the medium lizard, L. media. In L. media and L. viridis, the maximum lifespan was 10 and 8 years, respectively. The mean age and body size of females were significantly greater than those of males in L. media. However, in the examined L. viridis population, no appreciable variation in mean age or body size was found to exist between the sexes. It was estimated that the green lizards reach maturity at the age of 2 or 3 years. However, the L. media reached sexual maturity approximately 1 year later than the congener. The body size markedly increased with age in males for both studied populations. However, in females, body size positively increased with age only in L. media. The approach of skeletochronology that we utilized in this study to assess age structure makes it simple to gather a variety of time-dependent ecological data for such ectothermic species.
    MeSH term(s) Animals ; Female ; Male ; Ecosystem ; Body Size ; Lizards ; Longevity
    Language English
    Publishing date 2022-10-24
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2269667-2
    ISSN 1932-8494 ; 1932-8486
    ISSN (online) 1932-8494
    ISSN 1932-8486
    DOI 10.1002/ar.25099
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Wavelength synergistic effects in continuous flow-through water disinfection systems.

    Uppinakudru, Adithya Pai / Martín-Sómer, Miguel / Reynolds, Ken / Stanley, Simon / Bautista, Luis Fernando / Pablos, Cristina / Marugán, Javier

    Water research X

    2023  Volume 21, Page(s) 100208

    Abstract: The past decade's development of UV LEDs has fueled significant research in water disinfection, with widespread debate surrounding the potential synergies of multiple UV wavelengths. This study analyses the use of three UV sources (265, 275, and 310 nm) ... ...

    Abstract The past decade's development of UV LEDs has fueled significant research in water disinfection, with widespread debate surrounding the potential synergies of multiple UV wavelengths. This study analyses the use of three UV sources (265, 275, and 310 nm) on the inactivation of
    Language English
    Publishing date 2023-11-19
    Publishing country England
    Document type Journal Article
    ISSN 2589-9147
    ISSN (online) 2589-9147
    DOI 10.1016/j.wroa.2023.100208
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Protamine dosing in cardiac surgery.

    Vandenheuvel, Michael / Vandewiele, Korneel / De Somer, Filip / Wouters, Patrick F

    Perfusion

    2023  Volume 39, Issue 3, Page(s) 645–646

    MeSH term(s) Humans ; Protamines/therapeutic use ; Cardiac Surgical Procedures ; Anticoagulants ; Heparin ; Heparin Antagonists ; Cardiopulmonary Bypass
    Chemical Substances Protamines ; Anticoagulants ; Heparin (9005-49-6) ; Heparin Antagonists
    Language English
    Publishing date 2023-01-25
    Publishing country England
    Document type Letter
    ZDB-ID 645038-6
    ISSN 1477-111X ; 0267-6591
    ISSN (online) 1477-111X
    ISSN 0267-6591
    DOI 10.1177/02676591231154116
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Methods for Modeling Autocorrelation and Handling Missing Data in Mediation Analysis in Single Case Experimental Designs (SCEDs).

    Somer, Emma / Gische, Christian / Miočević, Milica

    Evaluation & the health professions

    2022  Volume 45, Issue 1, Page(s) 36–53

    Abstract: Single-Case Experimental Designs (SCEDs) are increasingly recognized as a valuable alternative to group designs. Mediation analysis is useful in SCEDs contexts because it informs researchers about the underlying mechanism through which an intervention ... ...

    Abstract Single-Case Experimental Designs (SCEDs) are increasingly recognized as a valuable alternative to group designs. Mediation analysis is useful in SCEDs contexts because it informs researchers about the underlying mechanism through which an intervention influences the outcome. However, methods for conducting mediation analysis in SCEDs have only recently been proposed. Furthermore, repeated measures of a target behavior present the challenges of autocorrelation and missing data. This paper aims to extend methods for estimating indirect effects in piecewise regression analysis in SCEDs by (1) evaluating three methods for modeling autocorrelation, namely, Newey-West (NW) estimation, feasible generalized least squares (FGLS) estimation, and explicit modeling of an autoregressive structure of order one (AR(1)) in the error terms and (2) evaluating multiple imputation in the presence of data that are missing completely at random. FGLS and AR(1) outperformed NW and OLS estimation in terms of efficiency, Type I error rates, and coverage, while OLS was superior to the methods in terms of power for larger samples. The performance of all methods is consistent across 0% and 20% missing data conditions. 50% missing data led to unsatisfactory power and biased estimates. In light of these findings, we provide recommendations for applied researchers.
    MeSH term(s) Humans ; Mediation Analysis ; Research Design
    Language English
    Publishing date 2022-02-26
    Publishing country United States
    Document type Journal Article
    ZDB-ID 603792-6
    ISSN 1552-3918 ; 0163-2787
    ISSN (online) 1552-3918
    ISSN 0163-2787
    DOI 10.1177/01632787211071136
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Book ; Thesis: The PEHO syndrome

    Somer, Mirja

    progressive encephalopathy with edema, hypsarrhythmia, and optic atrophy

    1993  

    Author's details Mirja Somer
    Language English
    Size 77 S. : Ill., graph. Darst.
    Publishing country Finland
    Document type Book ; Thesis
    Thesis / German Habilitation thesis Helsinki, Univ., Diss., 1993
    HBZ-ID HT009713318
    ISBN 952-90-4942-0 ; 978-952-90-4942-4
    Database Catalogue ZB MED Medicine, Health

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  8. Article ; Online: Cardiac surgery-Associated acute kidney injury - A narrative review.

    Rasmussen, Sebastian Buhl / Boyko, Yuliya / Ranucci, Marco / de Somer, Filip / Ravn, Hanne Berg

    Perfusion

    2023  , Page(s) 2676591231211503

    Abstract: Cardiac Surgery-Associated Acute Kidney Injury (CSA-AKI) is a serious complication seen in approximately 20-30% of cardiac surgery patients. The underlying pathophysiology is complex, often involving both patient- and procedure related risk factors. In ... ...

    Abstract Cardiac Surgery-Associated Acute Kidney Injury (CSA-AKI) is a serious complication seen in approximately 20-30% of cardiac surgery patients. The underlying pathophysiology is complex, often involving both patient- and procedure related risk factors. In contrast to AKI occurring after other types of major surgery, the use of cardiopulmonary bypass comprises both additional advantages and challenges, including non-pulsatile flow, targeted blood flow and pressure as well as the ability to manipulate central venous pressure (congestion). With an increasing focus on the impact of CSA-AKI on both short and long-term mortality, early identification and management of high-risk patients for CSA-AKI has evolved. The present narrative review gives an up-to-date summary on definition, diagnosis, underlying pathophysiology, monitoring and implications of CSA-AKI, including potential preventive interventions. The review will provide the reader with an in-depth understanding of how to identify, support and provide a more personalized and tailored perioperative management to avoid development of CSA-AKI.
    Language English
    Publishing date 2023-10-31
    Publishing country England
    Document type Journal Article ; Review
    ZDB-ID 645038-6
    ISSN 1477-111X ; 0267-6591
    ISSN (online) 1477-111X
    ISSN 0267-6591
    DOI 10.1177/02676591231211503
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Language training for unemployed non-natives

    Kivi, Laura Helena / Sõmer, Marko / Kallaste, Epp

    Who benefits the most?

    2020  

    Abstract: This study evaluates the local language training aimed at the unemployed in Estonia during 2015-2016. The impact of training on employment probability and labour income is estimated by combining propensity score matching with coarsened exact matching. ... ...

    Abstract This study evaluates the local language training aimed at the unemployed in Estonia during 2015-2016. The impact of training on employment probability and labour income is estimated by combining propensity score matching with coarsened exact matching. The impact on the probability of being employed is found to be positive after the end of the lock-in effect. Two years after the start of the language training the effect is around 8 pp. The initial lock-in effect is smaller for more flexible and shorter courses, for those with lower initial level of language skills and for those living outside of the capital region. The long-term effect is higher for those with lower level of initial language skills and does not differ by the course type or region. The results indicate that the local language training helps the unemployed non-natives to find employment, but does not give them access to higher-paying positions.
    Keywords ddc:330 ; C21 ; J24 ; J61 ; J64 ; Language skills ; immigrant population ; unemployment ; programme evaluation ; matching
    Subject code 331
    Language English
    Publisher London: Taylor & Francis
    Publishing country de
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  10. Article ; Online: Dry synovitis, a rare entity distinct from juvenile idiopathic arthritis.

    De Somer, Lien / Bader-Meunier, Brigitte / Breton, Sylvain / Brachi, Sara / Wouters, Carine / Zulian, Francesco

    Pediatric rheumatology online journal

    2023  Volume 21, Issue 1, Page(s) 7

    Abstract: ... patients.: Results: Twelve DS patients, 8F/4 M, with mean age at onset of 6.1 years, were included ...

    Abstract Background: Dry synovitis (DS) is a rare entity as only a few cases have been reported to date. We describe the clinical features, radiological manifestations and course of DS in comparison with rheumatoid factor negative polyarticular juvenile idiopathic arthritis (RFneg-polyJIA).
    Methods: We performed a multicenter retrospective collection of data of DS patients who presented with progressive joint limitations without palpable synovitis, absence of elevated acute phase reactants, negative ANA and RF, and imaging showing joint and/or osteochondral involvement. For comparative purposes, we included a cohort of RF neg-polyJIA patients.
    Results: Twelve DS patients, 8F/4 M, with mean age at onset of 6.1 years, were included. Presenting signs comprised delayed motor development, functional limitations and/or progressive stiffness. Clinical examination showed symmetric polyarticular involvement with variable muscular atrophy. MRI showed mild, diffuse synovial involvement, without effusion. With time, signs of progressive osteochondral damage became evident, despite treatment. All patients were treated with low-dose corticosteroids and methotrexate. Anti-TNF agents were prescribed in five. The response was variable with limited joint mobility in 11/12, and need of joint replacement in 2. In comparison with a cohort of RFneg-polyJIA, DS patients presented higher number of joint involved (p = 0.0001) and contractures (p = 0.0001), less swelling (p = 0.0001) and prolonged diagnostic delay (p = 0.0001).
    Conclusion: DS represents a unique juvenile-onset arthropathy, distinct from polyarticular JIA. Awareness among pediatricians is essential for early recognition and proper treatment. Further studies, including synovial pathology, immunology and genetics may contribute to a better understanding of this rare disorder of childhood.
    MeSH term(s) Humans ; Child ; Arthritis, Juvenile/diagnosis ; Retrospective Studies ; Delayed Diagnosis ; Tumor Necrosis Factor Inhibitors ; Synovitis/diagnosis
    Chemical Substances Tumor Necrosis Factor Inhibitors
    Language English
    Publishing date 2023-01-23
    Publishing country England
    Document type Multicenter Study ; Journal Article
    ZDB-ID 2279468-2
    ISSN 1546-0096 ; 1546-0096
    ISSN (online) 1546-0096
    ISSN 1546-0096
    DOI 10.1186/s12969-023-00789-9
    Database MEDical Literature Analysis and Retrieval System OnLINE

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