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  1. Article: Nuclear receptor signaling via NHR-49/MDT-15 regulates stress resilience and proteostasis in response to reproductive and metabolic cues.

    Sala, Ambre J / Grant, Rogan A / Imran, Ghania / Morton, Claire / Brielmann, Renee M / Bott, Laura C / Watts, Jennifer / Morimoto, Richard I

    bioRxiv : the preprint server for biology

    2023  

    Abstract: The ability to sense and respond to proteotoxic insults declines with age, leaving cells vulnerable to chronic and acute stressors. Reproductive cues modulate this decline in cellular proteostasis to influence organismal stress resilience ... ...

    Abstract The ability to sense and respond to proteotoxic insults declines with age, leaving cells vulnerable to chronic and acute stressors. Reproductive cues modulate this decline in cellular proteostasis to influence organismal stress resilience in
    Language English
    Publishing date 2023-04-25
    Publishing country United States
    Document type Preprint
    DOI 10.1101/2023.04.25.537803
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Astrocyte reactivity and inflammation-induced depression-like behaviors are regulated by Orai1 calcium channels.

    Novakovic, Michaela M / Korshunov, Kirill S / Grant, Rogan A / Martin, Megan E / Valencia, Hiam A / Budinger, G R Scott / Radulovic, Jelena / Prakriya, Murali

    Nature communications

    2023  Volume 14, Issue 1, Page(s) 5500

    Abstract: Astrocytes contribute to brain inflammation in neurological disorders but the molecular mechanisms controlling astrocyte reactivity and their relationship to neuroinflammatory endpoints are complex and poorly understood. In this study, we assessed the ... ...

    Abstract Astrocytes contribute to brain inflammation in neurological disorders but the molecular mechanisms controlling astrocyte reactivity and their relationship to neuroinflammatory endpoints are complex and poorly understood. In this study, we assessed the role of the calcium channel, Orai1, for astrocyte reactivity and inflammation-evoked depression behaviors in mice. Transcriptomics and metabolomics analysis indicated that deletion of Orai1 in astrocytes downregulates genes in inflammation and immunity, metabolism, and cell cycle pathways, and reduces cellular metabolites and ATP production. Systemic inflammation by peripheral lipopolysaccharide (LPS) increases hippocampal inflammatory markers in WT but not in astrocyte Orai1 knockout mice. Loss of Orai1 also blunts inflammation-induced astrocyte Ca
    MeSH term(s) Animals ; Mice ; Astrocytes ; Depression/genetics ; Lipopolysaccharides ; Inflammation/genetics ; Encephalitis ; Calcium Channels/genetics ; Mice, Knockout ; ORAI1 Protein/genetics
    Chemical Substances Lipopolysaccharides ; Calcium Channels ; Orai1 protein, mouse ; ORAI1 Protein
    Language English
    Publishing date 2023-09-07
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 2553671-0
    ISSN 2041-1723 ; 2041-1723
    ISSN (online) 2041-1723
    ISSN 2041-1723
    DOI 10.1038/s41467-023-40968-6
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Prolonged exposure to lung-derived cytokines is associated with activation of microglia in patients with COVID-19.

    Grant, Rogan A / Poor, Taylor A / Sichizya, Lango / Diaz, Estefani / Bailey, Joseph I / Soni, Sahil / Senkow, Karolina J / Pérez-Leonor, Xóchitl G / Abdala-Valencia, Hiam / Lu, Ziyan / Donnelly, Helen K / Simons, Lacy M / Ozer, Egon A / Tighe, Robert M / Lomasney, Jon W / Wunderink, Richard G / Singer, Benjamin D / Misharin, Alexander V / Budinger, G R Scott

    JCI insight

    2024  Volume 9, Issue 8

    Abstract: BACKGROUNDSurvivors of pneumonia, including SARS-CoV-2 pneumonia, are at increased risk for cognitive dysfunction and dementia. In rodent models, cognitive dysfunction following pneumonia has been linked to the systemic release of lung-derived pro- ... ...

    Abstract BACKGROUNDSurvivors of pneumonia, including SARS-CoV-2 pneumonia, are at increased risk for cognitive dysfunction and dementia. In rodent models, cognitive dysfunction following pneumonia has been linked to the systemic release of lung-derived pro-inflammatory cytokines. Microglia are poised to respond to inflammatory signals from the circulation, and their dysfunction has been linked to cognitive impairment in murine models of dementia and in humans.METHODSWe measured levels of 55 cytokines and chemokines in bronchoalveolar lavage fluid and plasma from 341 patients with respiratory failure and 13 healthy controls, including 93 unvaccinated patients with COVID-19 and 203 patients with other causes of pneumonia. We used flow cytometry to sort neuroimmune cells from postmortem brain tissue from 5 patients who died from COVID-19 and 3 patients who died from other causes for single-cell RNA-sequencing.RESULTSMicroglia from patients with COVID-19 exhibited a transcriptomic signature suggestive of their activation by circulating pro-inflammatory cytokines. Peak levels of pro-inflammatory cytokines were similar in patients with pneumonia irrespective of etiology, but cumulative cytokine exposure was higher in patients with COVID-19. Treatment with corticosteroids reduced expression of COVID-19-specific cytokines.CONCLUSIONProlonged lung inflammation results in sustained elevations in circulating cytokines in patients with SARS-CoV-2 pneumonia compared with those with pneumonia secondary to other pathogens. Microglia from patients with COVID-19 exhibit transcriptional responses to inflammatory cytokines. These findings support data from rodent models causally linking systemic inflammation with cognitive dysfunction in pneumonia and support further investigation into the role of microglia in pneumonia-related cognitive dysfunction.FUNDINGSCRIPT U19AI135964, UL1TR001422, P01AG049665, P01HL154998, R01HL149883, R01LM013337, R01HL153122, R01HL147290, R01HL147575, R01HL158139, R01ES034350, R01ES027574, I01CX001777, U01TR003528, R21AG075423, T32AG020506, F31AG071225, T32HL076139.
    MeSH term(s) Humans ; COVID-19/immunology ; COVID-19/complications ; Microglia/metabolism ; Microglia/immunology ; Cytokines/metabolism ; Cytokines/blood ; Male ; Female ; Middle Aged ; SARS-CoV-2 ; Aged ; Lung/immunology ; Lung/pathology ; Lung/virology ; Lung/metabolism ; Bronchoalveolar Lavage Fluid/immunology ; Bronchoalveolar Lavage Fluid/cytology ; Cognitive Dysfunction/immunology ; Cognitive Dysfunction/metabolism ; Adult ; Brain/metabolism ; Brain/immunology ; Brain/pathology
    Chemical Substances Cytokines
    Language English
    Publishing date 2024-03-19
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ISSN 2379-3708
    ISSN (online) 2379-3708
    DOI 10.1172/jci.insight.178859
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Lung Injury Induces Alveolar Type 2 Cell Hypertrophy and Polyploidy with Implications for Repair and Regeneration.

    Weng, Anthea / Maciel Herrerias, Mariana / Watanabe, Satoshi / Welch, Lynn C / Flozak, Annette S / Grant, Rogan A / Aillon, Raul Piseaux / Dada, Laura A / Han, Seung Hye / Hinchcliff, Monique / Misharin, Alexander V / Budinger, G R Scott / Gottardi, Cara J

    American journal of respiratory cell and molecular biology

    2022  Volume 66, Issue 5, Page(s) 564–576

    Abstract: Epithelial polyploidization after injury is a conserved phenomenon recently shown to improve barrier restoration during wound healing. Whether lung injury can induce alveolar epithelial polyploidy is not known. We show that bleomycin injury induces ... ...

    Abstract Epithelial polyploidization after injury is a conserved phenomenon recently shown to improve barrier restoration during wound healing. Whether lung injury can induce alveolar epithelial polyploidy is not known. We show that bleomycin injury induces alveolar type 2 cell (AT2) hypertrophy and polyploidy. AT2 polyploidization is also seen in short term
    MeSH term(s) Alveolar Epithelial Cells/metabolism ; Cell Differentiation ; Humans ; Hypertrophy/metabolism ; Lung Injury/chemically induced ; Lung Injury/genetics ; Lung Injury/metabolism ; Polyploidy
    Language English
    Publishing date 2022-02-24
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 1025960-0
    ISSN 1535-4989 ; 1044-1549
    ISSN (online) 1535-4989
    ISSN 1044-1549
    DOI 10.1165/rcmb.2021-0356OC
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: Prolonged exposure to lung-derived cytokines is associated with inflammatory activation of microglia in patients with COVID-19.

    Grant, Rogan A / Poor, Taylor A / Sichizya, Lango / Diaz, Estefani / Bailey, Joseph I / Soni, Sahil / Senkow, Karolina J / Pérez-Leonor, Xochítl G / Abdala-Valencia, Hiam / Lu, Ziyan / Donnelly, Helen K / Tighe, Robert M / Lomasney, Jon W / Wunderink, Richard G / Singer, Benjamin D / Misharin, Alexander V / Budinger, Gr Scott

    bioRxiv : the preprint server for biology

    2023  

    Abstract: Neurological impairment is the most common finding in patients with post-acute sequelae of COVID-19. Furthermore, survivors of pneumonia from any cause have an elevated risk of ... ...

    Abstract Neurological impairment is the most common finding in patients with post-acute sequelae of COVID-19. Furthermore, survivors of pneumonia from any cause have an elevated risk of dementia
    Language English
    Publishing date 2023-07-28
    Publishing country United States
    Document type Preprint
    DOI 10.1101/2023.07.28.550765
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Bacterial Superinfection Pneumonia in Patients Mechanically Ventilated for COVID-19 Pneumonia.

    Pickens, Chiagozie O / Gao, Catherine A / Cuttica, Michael J / Smith, Sean B / Pesce, Lorenzo L / Grant, Rogan A / Kang, Mengjia / Morales-Nebreda, Luisa / Bavishi, Avni A / Arnold, Jason M / Pawlowski, Anna / Qi, Chao / Budinger, G R Scott / Singer, Benjamin D / Wunderink, Richard G

    American journal of respiratory and critical care medicine

    2021  Volume 204, Issue 8, Page(s) 921–932

    Abstract: Rationale: ...

    Abstract Rationale:
    Language English
    Publishing date 2021-08-19
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 1180953-x
    ISSN 1535-4970 ; 0003-0805 ; 1073-449X
    ISSN (online) 1535-4970
    ISSN 0003-0805 ; 1073-449X
    DOI 10.1164/rccm.202106-1354OC
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Machine learning links unresolving secondary pneumonia to mortality in patients with severe pneumonia, including COVID-19

    Catherine A. Gao / Nikolay S. Markov / Thomas Stoeger / Anna Pawlowski / Mengjia Kang / Prasanth Nannapaneni / Rogan A. Grant / Chiagozie Pickens / James M. Walter / Jacqueline M. Kruser / Luke Rasmussen / Daniel Schneider / Justin Starren / Helen K. Donnelly / Alvaro Donayre / Yuan Luo / G.R. Scott Budinger / Richard G. Wunderink / Alexander V. Misharin /
    Benjamin D. Singer / The NU SCRIPT Study Investigators

    The Journal of Clinical Investigation, Vol 133, Iss

    2023  Volume 12

    Abstract: ... of VAP.FUNDING National Institute of Allergy and Infectious Diseases (NIAID), NIH grant U19AI135964 ...

    Abstract BACKGROUND Despite guidelines promoting the prevention and aggressive treatment of ventilator-associated pneumonia (VAP), the importance of VAP as a driver of outcomes in mechanically ventilated patients, including patients with severe COVID-19, remains unclear. We aimed to determine the contribution of unsuccessful treatment of VAP to mortality for patients with severe pneumonia.METHODS We performed a single-center, prospective cohort study of 585 mechanically ventilated patients with severe pneumonia and respiratory failure, 190 of whom had COVID-19, who underwent at least 1 bronchoalveolar lavage. A panel of intensive care unit (ICU) physicians adjudicated the pneumonia episodes and endpoints on the basis of clinical and microbiological data. Given the relatively long ICU length of stay (LOS) among patients with COVID-19, we developed a machine-learning approach called CarpeDiem, which grouped similar ICU patient-days into clinical states based on electronic health record data.RESULTS CarpeDiem revealed that the long ICU LOS among patients with COVID-19 was attributable to long stays in clinical states characterized primarily by respiratory failure. While VAP was not associated with mortality overall, the mortality rate was higher for patients with 1 episode of unsuccessfully treated VAP compared with those with successfully treated VAP (76.4% versus 17.6%, P < 0.001). For all patients, including those with COVID-19, CarpeDiem demonstrated that unresolving VAP was associated with a transitions to clinical states associated with higher mortality.CONCLUSIONS Unsuccessful treatment of VAP is associated with higher mortality. The relatively long LOS for patients with COVID-19 was primarily due to prolonged respiratory failure, placing them at higher risk of VAP.FUNDING National Institute of Allergy and Infectious Diseases (NIAID), NIH grant U19AI135964; National Heart, Lung, and Blood Institute (NHLBI), NIH grants R01HL147575, R01HL149883, R01HL153122, R01HL153312, R01HL154686, R01HL158139, P01HL071643, and ...
    Keywords Infectious disease ; Pulmonology ; Medicine ; R
    Subject code 610
    Language English
    Publishing date 2023-06-01T00:00:00Z
    Publisher American Society for Clinical Investigation
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  8. Article ; Online: Machine learning links unresolving secondary pneumonia to mortality in patients with severe pneumonia, including COVID-19.

    Gao, Catherine A / Markov, Nikolay S / Stoeger, Thomas / Pawlowski, Anna / Kang, Mengjia / Nannapaneni, Prasanth / Grant, Rogan A / Pickens, Chiagozie / Walter, James M / Kruser, Jacqueline M / Rasmussen, Luke / Schneider, Daniel / Starren, Justin / Donnelly, Helen K / Donayre, Alvaro / Luo, Yuan / Budinger, G R Scott / Wunderink, Richard G / Misharin, Alexander V /
    Singer, Benjamin D

    The Journal of clinical investigation

    2023  Volume 133, Issue 12

    Abstract: ... FUNDINGNational Institute of Allergy and Infectious Diseases (NIAID), NIH grant U19AI135964 ... P01AG049665; National Library of Medicine (NLM), NIH grant R01LM013337; National Center for Advancing ... Translational Sciences (NCATS), NIH grant U01TR003528; Veterans Affairs grant I01CX001777; Chicago Biomedical ...

    Abstract BACKGROUNDDespite guidelines promoting the prevention and aggressive treatment of ventilator-associated pneumonia (VAP), the importance of VAP as a driver of outcomes in mechanically ventilated patients, including patients with severe COVID-19, remains unclear. We aimed to determine the contribution of unsuccessful treatment of VAP to mortality for patients with severe pneumonia.METHODSWe performed a single-center, prospective cohort study of 585 mechanically ventilated patients with severe pneumonia and respiratory failure, 190 of whom had COVID-19, who underwent at least 1 bronchoalveolar lavage. A panel of intensive care unit (ICU) physicians adjudicated the pneumonia episodes and endpoints on the basis of clinical and microbiological data. Given the relatively long ICU length of stay (LOS) among patients with COVID-19, we developed a machine-learning approach called CarpeDiem, which grouped similar ICU patient-days into clinical states based on electronic health record data.RESULTSCarpeDiem revealed that the long ICU LOS among patients with COVID-19 was attributable to long stays in clinical states characterized primarily by respiratory failure. While VAP was not associated with mortality overall, the mortality rate was higher for patients with 1 episode of unsuccessfully treated VAP compared with those with successfully treated VAP (76.4% versus 17.6%, P < 0.001). For all patients, including those with COVID-19, CarpeDiem demonstrated that unresolving VAP was associated with a transitions to clinical states associated with higher mortality.CONCLUSIONSUnsuccessful treatment of VAP is associated with higher mortality. The relatively long LOS for patients with COVID-19 was primarily due to prolonged respiratory failure, placing them at higher risk of VAP.FUNDINGNational Institute of Allergy and Infectious Diseases (NIAID), NIH grant U19AI135964; National Heart, Lung, and Blood Institute (NHLBI), NIH grants R01HL147575, R01HL149883, R01HL153122, R01HL153312, R01HL154686, R01HL158139, P01HL071643, and P01HL154998; National Heart, Lung, and Blood Institute (NHLBI), NIH training grants T32HL076139 and F32HL162377; National Institute on Aging (NIA), NIH grants K99AG068544, R21AG075423, and P01AG049665; National Library of Medicine (NLM), NIH grant R01LM013337; National Center for Advancing Translational Sciences (NCATS), NIH grant U01TR003528; Veterans Affairs grant I01CX001777; Chicago Biomedical Consortium grant; Northwestern University Dixon Translational Science Award; Simpson Querrey Lung Institute for Translational Science (SQLIFTS); Canning Thoracic Institute of Northwestern Medicine.
    MeSH term(s) United States ; Humans ; Prospective Studies ; COVID-19/therapy ; Pneumonia, Ventilator-Associated/drug therapy ; Pneumonia, Ventilator-Associated/microbiology ; Pneumonia, Ventilator-Associated/prevention & control ; Bronchoalveolar Lavage ; Respiratory Insufficiency
    Language English
    Publishing date 2023-06-15
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, U.S. Gov't, Non-P.H.S. ; Research Support, Non-U.S. Gov't
    ZDB-ID 3067-3
    ISSN 1558-8238 ; 0021-9738
    ISSN (online) 1558-8238
    ISSN 0021-9738
    DOI 10.1172/JCI170682
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: The Second Annual Symposium of the Midwest Aging Consortium: The Future of Aging Research in the Midwestern United States.

    Green, Cara L / Englund, Davis A / Das, Srijit / Herrerias, Mariana M / Yousefzadeh, Matthew J / Grant, Rogan A / Clark, Josef / Pak, Heidi H / Liu, Peiduo / Bai, Hua / Prahlad, Veena / Lamming, Dudley W / Chusyd, Daniella E

    The journals of gerontology. Series A, Biological sciences and medical sciences

    2021  Volume 76, Issue 12, Page(s) 2156–2161

    Abstract: While the average human life span continues to increase, there is little evidence that this is leading to a contemporaneous increase in "healthy years" experienced by our aging population. Consequently, many scientists focus their research on ... ...

    Abstract While the average human life span continues to increase, there is little evidence that this is leading to a contemporaneous increase in "healthy years" experienced by our aging population. Consequently, many scientists focus their research on understanding the process of aging and trialing interventions that can promote healthspan. The 2021 Midwest Aging Consortium consensus statement is to develop and further the understanding of aging and age-related disease using the wealth of expertise across universities in the Midwestern United States. This report summarizes the cutting-edge research covered in a virtual symposium held by a consortium of researchers in the Midwestern United States, spanning topics such as senescence biomarkers, serotonin-induced DNA protection, immune system development, multisystem impacts of aging, neural decline following severe infection, the unique transcriptional impact of calorie restriction of different fat depots, the pivotal role of fasting in calorie restriction, the impact of peroxisome dysfunction, and the influence of early life trauma on health. The symposium speakers presented data from studies conducted in a variety of common laboratory animals as well as less-common species, including Caenorhabditis elegans, Drosophila, mice, rhesus macaques, elephants, and humans. The consensus of the symposium speakers is that this consortium highlights the strength of aging research in the Midwestern United States as well as the benefits of a collaborative and diverse approach to geroscience.
    MeSH term(s) Aging ; Animals ; Biomedical Research/trends ; Caloric Restriction ; Geroscience/trends ; Humans ; Longevity ; Macaca mulatta ; Models, Animal
    Language English
    Publishing date 2021-07-29
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S.
    ZDB-ID 1223643-3
    ISSN 1758-535X ; 1079-5006
    ISSN (online) 1758-535X
    ISSN 1079-5006
    DOI 10.1093/gerona/glab210
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Impact of traumatic brain injury on amyotrophic lateral sclerosis: from bedside to bench.

    Franz, Colin K / Joshi, Divya / Daley, Elizabeth L / Grant, Rogan A / Dalamagkas, Kyriakos / Leung, Audrey / Finan, John D / Kiskinis, Evangelos

    Journal of neurophysiology

    2019  Volume 122, Issue 3, Page(s) 1174–1185

    Abstract: Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disease characterized by the loss of upper and lower motor neurons, which manifests clinically as progressive weakness. Although several epidemiological studies have found an association between ... ...

    Abstract Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disease characterized by the loss of upper and lower motor neurons, which manifests clinically as progressive weakness. Although several epidemiological studies have found an association between traumatic brain injury (TBI) and ALS, there is not a consensus on whether TBI is an ALS risk factor. It may be that it can cause ALS in a subset of susceptible patients, based on a history of repetitive mild TBI and genetic predisposition. This cannot be determined based on clinical observational studies alone. Better preclinical models are necessary to evaluate the effects of TBI on ALS onset and progression. To date, only a small number of preclinical studies have been performed, mainly in the superoxide dismutase 1 transgenic rodents, which, taken together, have mixed results and notable methodological limitations. The more recent incorporation of additional animal models such as
    MeSH term(s) Amyotrophic Lateral Sclerosis/etiology ; Amyotrophic Lateral Sclerosis/metabolism ; Amyotrophic Lateral Sclerosis/physiopathology ; Animals ; Brain Concussion/complications ; Brain Concussion/metabolism ; Brain Concussion/physiopathology ; DNA-Binding Proteins ; Humans ; Induced Pluripotent Stem Cells ; Superoxide Dismutase-1
    Chemical Substances DNA-Binding Proteins ; TARDBP protein, human ; Superoxide Dismutase-1 (EC 1.15.1.1)
    Language English
    Publishing date 2019-05-22
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't ; Review
    ZDB-ID 80161-6
    ISSN 1522-1598 ; 0022-3077
    ISSN (online) 1522-1598
    ISSN 0022-3077
    DOI 10.1152/jn.00572.2018
    Database MEDical Literature Analysis and Retrieval System OnLINE

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