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Article ; Online: Prevalence, Severity, and Description of Dental Anomalies in Children Treated for Acute Lymphoblastic Leukemia.

Boutin, Cynthia / Huynh, Nelly / Rompré, Pierre / Laverdière, Caroline / Asselin, Marie-Ève

2023 Volume 45, Issue 6, Page(s) 465–468

Abstract: Purpose: ...

Abstract	Purpose:
MeSH term(s)	Child ; Humans ; Adolescent ; Young Adult ; Adult ; Prevalence ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/complications ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/epidemiology ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/drug therapy ; Tooth Abnormalities/epidemiology ; Tooth, Impacted ; Molar/abnormalities
Language	English
Publishing date	2023-12-22
Publishing country	United States
Document type	Journal Article
ZDB-ID	604709-9
ISSN	1942-5473 ; 0164-1263
ISSN (online)	1942-5473
ISSN	0164-1263
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Article: New Insights into the Fungal Diversity of Cranberry Fruit Rot in Québec Farms Through a Large-Scale Molecular Analysis.

Conti, Matteo / Cinget, Benjamin / Labbé, Caroline / Asselin, Yanick / Bélanger, Richard R

Plant disease

2022 Volume 106, Issue 1, Page(s) 215–222

Abstract: Cranberry fruit rot (CFR) pathogens are widely reported in the literature, but performing large-scale analysis of their presence inside fruit has always been challenging. In this study, a new molecular diagnostic tool, capable of identifying ... ...

Abstract	Cranberry fruit rot (CFR) pathogens are widely reported in the literature, but performing large-scale analysis of their presence inside fruit has always been challenging. In this study, a new molecular diagnostic tool, capable of identifying simultaneously 12 potential fungal species causing CFR, was used to better define the impact of CFR across cranberry fields in Québec. For this purpose, 126 fields and 7,825 fruits were sampled in three cranberry farms distributed throughout the province and subjected to comparative analyses of fungal presence and abundance according to cultural practices, sampling times, and cranberry cultivars. All 12 pathogens were detected throughout the study, but as a first major finding, the analyses revealed that four species,
MeSH term(s)	Farms ; Fruit ; Plant Extracts ; Quebec ; Vaccinium macrocarpon
Chemical Substances	Plant Extracts
Language	English
Publishing date	2022-01-21
Publishing country	United States
Document type	Journal Article
ZDB-ID	754182-x
ISSN	0191-2917
ISSN	0191-2917
DOI	10.1094/PDIS-06-21-1163-RE
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Article ; Online: RXLR effector gene Avr3a from Phytophthora sojae is recognized by Rps8 in soybean.

Arsenault-Labrecque, Geneviève / Santhanam, Parthasarathy / Asselin, Yanick / Cinget, Benjamin / Lebreton, Amandine / Labbé, Caroline / Belzile, François / Gijzen, Mark / Bélanger, Richard R

Molecular plant pathology

2022 Volume 23, Issue 5, Page(s) 693–706

Abstract: The use of resistance genes in elite soybean cultivars is one of the most widely used methods to manage Phytophthora sojae. This method relies on effector-triggered immunity, where a Resistant to P. sojae (Rps) gene product from the plant recognizes a ... ...

Abstract	The use of resistance genes in elite soybean cultivars is one of the most widely used methods to manage Phytophthora sojae. This method relies on effector-triggered immunity, where a Resistant to P. sojae (Rps) gene product from the plant recognizes a specific effector from the pathogen, encoded by an avirulence (Avr) gene. Many Avr genes from P. sojae have been identified in the last decade, allowing a better exploitation of this type of resistance. The objective of the present study was to identify the Avr gene triggering immunity derived from the soybean resistance gene Rps8. The analysis of a segregating F
MeSH term(s)	Alleles ; Haplotypes/genetics ; Phytophthora infestans/genetics ; Plant Diseases ; Glycine max/genetics ; Virulence/genetics
Language	English
Publishing date	2022-02-12
Publishing country	England
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2020755-4
ISSN	1364-3703 ; 1364-3703
ISSN (online)	1364-3703
ISSN	1364-3703
DOI	10.1111/mpp.13190
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Article: New Insights into the Fungal Diversity of Cranberry Fruit Rot in Québec Farms Through a Large-Scale Molecular Analysis

Conti, Matteo / Cinget, Benjamin / Labbé, Caroline / Asselin, Yanick / Bélanger, Richard R.

Plant disease. 2022 Jan. 31, v. 106, no. 1

2022

Abstract	Cranberry fruit rot (CFR) pathogens are widely reported in the literature, but performing large-scale analysis of their presence inside fruit has always been challenging. In this study, a new molecular diagnostic tool, capable of identifying simultaneously 12 potential fungal species causing CFR, was used to better define the impact of CFR across cranberry fields in Québec. For this purpose, 126 fields and 7,825 fruits were sampled in three cranberry farms distributed throughout the province and subjected to comparative analyses of fungal presence and abundance according to cultural practices, sampling times, and cranberry cultivars. All 12 pathogens were detected throughout the study, but as a first major finding, the analyses revealed that four species, Godronia cassandrae, Colletotrichum fructivorum, Allantophomopsis cytisporea, and Coleophoma empetri, were consistently predominant regardless of the parameters studied. Comparison of conventional and organic productions showed a significant reduction in fungal richness and relative abundance. Interestingly, Monilinia oxycocci was found almost exclusively in organic productions, indicating that fungicides had a strong and persistent effect on its population. Surprisingly, there were no significant differences in fungal relative abundance or species richness between fruit sampled at harvest or in storage, suggesting that there may not exist a clear distinction between field and storage rot, as was previously thought. Comparative analysis of fungal species found on eight different cranberry cultivars indicated that they were all infected by the same fungi but could not rule out differences in genetic resistance. This large-scale analysis allows us to draw an exhaustive picture of CFR in Québec and provides new information with respect to its management.
Keywords	Colletotrichum ; Godronia ; Monilinia oxycocci ; cranberries ; cultivars ; diagnostic techniques ; fruits ; fungi ; genetic resistance ; plant rots ; species richness ; Quebec
Language	English
Dates of publication	2022-0131
Size	p. 215-222.
Publishing place	The American Phytopathological Society
Document type	Article
ZDB-ID	754182-x
ISSN	0191-2917
ISSN	0191-2917
DOI	10.1094/PDIS-06-21-1163-RE
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Article: Product Biodiversity Footprint – A novel approach to compare the impact of products on biodiversity combining Life Cycle Assessment and Ecology

Asselin, Anne / Rabaud, Suzanne / Catalan, Caroline / Leveque, Benjamin / L’Haridon, Jacques / Martz, Patricia / Neveux, Guillaume

Journal of cleaner production. 2020 Mar. 01, v. 248

2020

Abstract: Product impacts on ecosystem quality have long been addressed by the topdown approach known as Life Cycle Assessment (LCA). Impacts are most of the time assessed within the “biodiversity loss” damage category indicator. However, LCA methods do not cover ... ...

Abstract	Product impacts on ecosystem quality have long been addressed by the topdown approach known as Life Cycle Assessment (LCA). Impacts are most of the time assessed within the “biodiversity loss” damage category indicator. However, LCA methods do not cover the 5 drivers of biodiversity loss as identified by (Millenium Ecosystem Assessment, 2005) (MEA): only land occupation and transformation, pollution, and climate change are covered, while species overexploitation and invasive species are not. Besides, ecologists work on the ground to measure concrete impacts from given practices on biodiversity in specific areas for some parts of the value chain of the product (e.g. production of agricultural biomaterial).The Product Biodiversity Footprint (PBF) approach aims at bridging the gap between LCA and ecology. Its objective is to allow comparison of variants of a given product to support eco-design, addressing the five drivers of MEA. The methodology combines LCA and ecology current knowledge and organizes them towards practical indicators and representations for business decision.PBF has been tested in three business case studies. The one for L’Oréal presented herewith shows that the integration of ecological data enables to refine and complement LCA results. This method at product level is, to our knowledge, the first to address the five MEA drivers on biodiversity along the value chain, with a combination of quantitative and semi-quantitative indicators. Stemming from an LCA global framework and approach, ecology knowledge adds refinements that enable to distinguish between different anthropogenic practices and better informed decision making.
Keywords	biocompatible materials ; biodiversity ; case studies ; climate change ; concrete ; decision making ; design for environment ; ecosystems ; environmental impact ; invasive species ; life cycle assessment ; pollution ; supply chain
Language	English
Dates of publication	2020-0301
Publishing place	Elsevier Ltd
Document type	Article
ISSN	0959-6526
DOI	10.1016/j.jclepro.2019.119262
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Article: RXLR effector gene Avr3a from Phytophthora sojae is recognized by Rps8 in soybean

Arsenault‐Labrecque, Geneviève / Santhanam, Parthasarathy / Asselin, Yanick / Cinget, Benjamin / Lebreton, Amandine / Labbé, Caroline / Belzile, François / Gijzen, Mark / Bélanger, Richard R.

Molecular plant pathology. 2022 May, v. 23, no. 5

2022

Abstract: The use of resistance genes in elite soybean cultivars is one of the most widely used methods to manage Phytophthora sojae. This method relies on effector‐triggered immunity, where a Resistant to P. sojae (Rps) gene product from the plant recognizes a ... ...

Abstract	The use of resistance genes in elite soybean cultivars is one of the most widely used methods to manage Phytophthora sojae. This method relies on effector‐triggered immunity, where a Resistant to P. sojae (Rps) gene product from the plant recognizes a specific effector from the pathogen, encoded by an avirulence (Avr) gene. Many Avr genes from P. sojae have been identified in the last decade, allowing a better exploitation of this type of resistance. The objective of the present study was to identify the Avr gene triggering immunity derived from the soybean resistance gene Rps8. The analysis of a segregating F₂ progeny coupled with a genotyping‐by‐sequencing approach led to the identification of a putative Avr8 locus. The investigation of this locus using whole‐genome sequencing data from 31 isolates of P. sojae identified Avr3a as the likely candidate for Avr8. Long‐read sequencing also revealed that P. sojae isolates can carry up to five copies of the Avr3a gene, compared to the four previously reported. Haplotype and transcriptional analyses showed that amino acid changes and absence of Avr3a transcripts from P. sojae isolates caused changes in virulence towards Rps8. Functional analyses using CRISPR/Cas9 knockout and constitutive expression demonstrated that Rps8 interacted with Avr3a. We also showed that a specific allele of Avr3a is recognized by Rps3a but not Rps8. While Rps3a and Rps8 have been previously described as closely linked, this is the first report of a clear distinction hitherto undefined between these two resistance genes.
Keywords	CRISPR-Cas systems ; Phytophthora sojae ; alleles ; amino acids ; cultivars ; gene expression ; genotyping by sequencing ; haplotypes ; immunity ; loci ; pathogens ; plant pathology ; progeny ; resistance genes ; soybeans ; transcription (genetics) ; virulence
Language	English
Dates of publication	2022-05
Size	p. 693-706.
Publishing place	John Wiley & Sons, Ltd
Document type	Article
Note	JOURNAL ARTICLE
ZDB-ID	2020755-4
ISSN	1364-3703 ; 1464-6722
ISSN (online)	1364-3703
ISSN	1464-6722
DOI	10.1111/mpp.13190
Database	NAL-Catalogue (AGRICOLA)

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Article ; Online: Dexrazoxane and Long-Term Heart Function in Survivors of Childhood Cancer.

Chow, Eric J / Aggarwal, Sanjeev / Doody, David R / Aplenc, Richard / Armenian, Saro H / Baker, K Scott / Bhatia, Smita / Blythe, Nancy / Colan, Steven D / Constine, Louis S / Freyer, David R / Kopp, Lisa M / Laverdière, Caroline / Leisenring, Wendy M / Sasaki, Nao / Vrooman, Lynda M / Asselin, Barbara L / Schwartz, Cindy L / Lipshultz, Steven E

Journal of clinical oncology : official journal of the American Society of Clinical Oncology

2023 Volume 41, Issue 12, Page(s) 2248–2257

Abstract: Purpose: For survivors of childhood cancer treated with doxorubicin, dexrazoxane is cardioprotective for at least 5 years. However, longer-term data are lacking.: Methods: Within the Children's Oncology Group and the Dana Farber Cancer Institute's ... ...

Abstract	Purpose: For survivors of childhood cancer treated with doxorubicin, dexrazoxane is cardioprotective for at least 5 years. However, longer-term data are lacking. Methods: Within the Children's Oncology Group and the Dana Farber Cancer Institute's Childhood Acute Lymphoblastic Leukemia Consortium, we evaluated four randomized trials of children with acute lymphoblastic leukemia or Hodgkin lymphoma, who received doxorubicin with or without dexrazoxane, and a nonrandomized trial of patients with osteosarcoma who all received doxorubicin with dexrazoxane. Cumulative doxorubicin doses ranged from 100 to 600 mg/m Results: From 49 participating institutions, 195 participants were assessed at 18.1 ± 2.7 years since cancer diagnosis (51% dexrazoxane-exposed; cumulative doxorubicin dose 297 ± 91 mg/m Conclusion: Among young adult-aged survivors of childhood cancer, dexrazoxane was associated with a cardioprotective effect nearly 20 years after initial anthracycline exposure.
MeSH term(s)	Young Adult ; Child ; Humans ; Aged ; Dexrazoxane/adverse effects ; Cancer Survivors ; Doxorubicin ; Antibiotics, Antineoplastic/therapeutic use ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/drug therapy ; Osteosarcoma/drug therapy ; Bone Neoplasms/drug therapy
Chemical Substances	Dexrazoxane (048L81261F) ; Doxorubicin (80168379AG) ; Antibiotics, Antineoplastic
Language	English
Publishing date	2023-01-20
Publishing country	United States
Document type	Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
ZDB-ID	604914-x
ISSN	1527-7755 ; 0732-183X
ISSN (online)	1527-7755
ISSN	0732-183X
DOI	10.1200/JCO.22.02423
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Article ; Online: Exploring the synthesis and anticancer potential of L-tyrosine-platinum(II) hybrid molecules.

Descôteaux, Caroline / Brasseur, Kevin / Leblanc, Valérie / Asselin, Eric / Bérubé, Gervais

Medicinal chemistry (Shariqah (United Arab Emirates))

2015 Volume 11, Issue 8, Page(s) 717–724

Abstract: The search for new specific chemotherapeutic drugs designed to minimize the toxic side effects resulting from chemotherapy is still a subject of intense research. The objective of the current study was to design a non-steroidal-platinum(II) derivative ... ...

Abstract	The search for new specific chemotherapeutic drugs designed to minimize the toxic side effects resulting from chemotherapy is still a subject of intense research. The objective of the current study was to design a non-steroidal-platinum(II) derivative that would target the estrogen receptor alpha (ERα) without triggering estrogenic cell proliferation. For this purpose, the amino acid L-tyrosine was modified and attached to a cisplatin analog. Hence, the L-tyrosine portion of the molecule could possibly act as a transporter to target the ERα protein and, by doing so concentrate the cytotoxic moiety to hormone-dependent breast cancer cells. Herein, we describe three different alternative methodologies that were used to make these new anticancer molecules. The L-tyrosine-Pt(II) hybrid 5b was made in four steps with 36% overall yield by the first method, in six steps with 11% overall yield by the second method and, in four steps with 23% overall yield by the third method. Preliminary biological activity on breast cancer cell lines indicated that the final hybrids (5a and 5b) were unfortunately inactive but their platinum(II) precursors (14a and 14b) showed activity similar to that of cisplatin.
MeSH term(s)	Antineoplastic Agents/chemical synthesis ; Antineoplastic Agents/chemistry ; Antineoplastic Agents/pharmacology ; Cell Line, Tumor ; Cell Proliferation/drug effects ; Dose-Response Relationship, Drug ; Drug Screening Assays, Antitumor ; Humans ; MCF-7 Cells ; Molecular Structure ; Organoplatinum Compounds/chemical synthesis ; Organoplatinum Compounds/chemistry ; Organoplatinum Compounds/pharmacology ; Structure-Activity Relationship ; Tyrosine/chemistry ; Tyrosine/pharmacology
Chemical Substances	Antineoplastic Agents ; Organoplatinum Compounds ; Tyrosine (42HK56048U)
Language	English
Publishing date	2015-03-11
Publishing country	Netherlands
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ISSN	1875-6638
ISSN (online)	1875-6638
DOI	10.2174/1573406411666150504123750
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Article: Tracheal stenosis and adenocarcinoma in an olive baboon (Papio cynocephalus anubis).

Asselin, Kristina A / Carlson Scholz, Jodi A / Zeiss, Caroline

Comparative medicine

2012 Volume 61, Issue 6, Page(s) 546–551

Abstract: An adult female baboon (Papio cynocephalus anubis) presented for progressive difficulty in endotracheal intubation. Over a 7-y period prior to presentation, she was anesthetized and intubated 67 times for imaging by using single-photon emission computed ... ...

Abstract	An adult female baboon (Papio cynocephalus anubis) presented for progressive difficulty in endotracheal intubation. Over a 7-y period prior to presentation, she was anesthetized and intubated 67 times for imaging by using single-photon emission computed tomography or positron emission tomography. Laryngoscopic examination revealed tracheal stenosis. Because of increased anesthetic risk and lack of alternative use, she was euthanized, and partial necropsy focusing on the larynx, trachea, and associated structures was performed. Gross examination revealed rigidity and functional fusion of the proximal 5 or 6 tracheal rings and narrowing of the lumen. Histology revealed ossification of tracheal rings and fibrosis of overlying tissue. In addition, a transmural umbilicated mass was present midway down the cervical trachea on its dorsolateral aspect. Histology of the tracheal mass identified a relatively well-circumscribed transmural adenocarcinoma. The combination of overall histologic pattern, evidence of anaplasia, and results of immunohistochemical staining was consistent with a diagnosis of adenoid cystic carcinoma. Anterior tracheal stenosis is a reported complication of intubation in humans and animals. Primary tracheal neoplasms are rare in domestic and research animals and, to our knowledge, have not previously been reported to occur in nonhuman primates.
MeSH term(s)	Adenocarcinoma/etiology ; Adenocarcinoma/pathology ; Adenocarcinoma/veterinary ; Animals ; Animals, Laboratory ; Fatal Outcome ; Female ; Immunohistochemistry/veterinary ; Monkey Diseases/etiology ; Monkey Diseases/pathology ; Papio cynocephalus ; Positron-Emission Tomography/adverse effects ; Positron-Emission Tomography/veterinary ; Tomography, Emission-Computed, Single-Photon/adverse effects ; Tomography, Emission-Computed, Single-Photon/veterinary ; Tracheal Stenosis/etiology ; Tracheal Stenosis/pathology ; Tracheal Stenosis/veterinary
Language	English
Publishing date	2012-02-13
Publishing country	United States
Document type	Case Reports ; Journal Article
ZDB-ID	2006425-1
ISSN	1532-0820 ; 0023-6764
ISSN	1532-0820 ; 0023-6764
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Article ; Online: Predictors of thrombosis in children receiving therapy for acute lymphoblastic leukemia: Results from Dana-Farber Cancer Institute ALL Consortium trial 05-001.

Athale, Uma H / Flamand, Yael / Blonquist, Traci / Stevenson, Kristen E / Spira, Menachem / Asselin, Barbara L / Clavell, Luis A / Cole, Peter D / Kelly, Kara M / Laverdiere, Caroline / Leclerc, Jean-Marie / Michon, Bruno / Schorin, Marshall A / Welch, Jennifer J G / Harris, Marian H / Neuberg, Donna S / Sallan, Stephen E / Silverman, Lewis B

Pediatric blood & cancer

2022 Volume 69, Issue 8, Page(s) e29581

Abstract: Background/objectives: Although thromboembolism (TE) is a serious complication in patients with acute lymphoblastic leukemia (ALL), thromboprophylaxis is not commonly used due to the inherent bleeding risk in this population. Identifying prothrombotic ... ...

Abstract	Background/objectives: Although thromboembolism (TE) is a serious complication in patients with acute lymphoblastic leukemia (ALL), thromboprophylaxis is not commonly used due to the inherent bleeding risk in this population. Identifying prothrombotic risk factors will help target thromboprophylaxis to those at highest thrombotic risk. We aimed to define predictors and the impact of TE on ALL outcome in children (1-18 years) treated on the Dana-Farber Cancer Institute ALL 05-001 trial. Methods: Clinical and laboratory data including TE events were prospectively collected. PCR-based allelic discrimination assay identified single-nucleotide polymorphisms (SNP) for prothrombin G20210A (rs1799963) and Factor V G1691A (rs6025). Univariate and multivariable competing risk regression models evaluated the effect of diagnostic clinical (age, sex, body mass index, ALL-immunophenotype, risk group) and laboratory variables (presenting leukocyte count, blood group, SNPs) on the cumulative incidence of TE. Cox regression modeling explored the impact of TE on survival. Results: Of 794 patients [median age 4.97 (range, 1.04-17.96) years; males 441], 100 developed TE; 25-month cumulative incidence 13.0% (95% CI, 10.7%-15.5%). Univariate analyses identified older age (≥10 years), presenting leucocyte count, T-ALL, high-risk ALL, and non-O blood group as risk factors. Age and non-O blood group were independent predictors of TE on multivariable regression; the blood group impact being most evident in patients 1-5 years of age (P = 0.011). TE did not impact survival. Induction TE was independently associated with induction failure (OR 6.45; 95% CI, 1.64-25.47; P = 0.008). Conclusion: We recommend further evaluation of these risk factors and consideration of thromboprophylaxis for patients ≥10 years (especially those ≥15 years) when receiving asparaginase.
MeSH term(s)	Anticoagulants/adverse effects ; Blood Group Antigens/therapeutic use ; Child ; Child, Preschool ; Humans ; Male ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/complications ; Risk Factors ; Thrombosis/chemically induced ; Thrombosis/epidemiology ; Venous Thromboembolism
Chemical Substances	Anticoagulants ; Blood Group Antigens
Language	English
Publishing date	2022-03-22
Publishing country	United States
Document type	Journal Article ; Research Support, N.I.H., Extramural
ZDB-ID	2131448-2
ISSN	1545-5017 ; 1545-5009
ISSN (online)	1545-5017
ISSN	1545-5009
DOI	10.1002/pbc.29581
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