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  1. Article ; Online: Porphyromonas gingivalis

    Stanisic, Dragana / Jeremic, Nevena / Singh, Mahavir / Pushpakumar, Sathnur / Mokshagundam, Sri Prakash L / Tyagi, Suresh C

    Canadian journal of physiology and pharmacology

    2023  Volume 101, Issue 8, Page(s) 413–424

    Abstract: Porphyromonas ... ...

    Abstract Porphyromonas gingivalis
    Language English
    Publishing date 2023-05-19
    Publishing country Canada
    Document type Journal Article
    ZDB-ID 127527-6
    ISSN 1205-7541 ; 0008-4212
    ISSN (online) 1205-7541
    ISSN 0008-4212
    DOI 10.1139/cjpp-2022-0392
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Exogenous hydrogen sulfide and miR-21 antagonism attenuates macrophage-mediated inflammation in ischemia reperfusion injury of the aged kidney.

    Pushpakumar, Sathnur / Kundu, Sourav / Weber, Gregory / Sen, Utpal

    GeroScience

    2021  Volume 43, Issue 3, Page(s) 1349–1367

    Abstract: Ischemia reperfusion injury (IRI) is a common cause of acute kidney injury (AKI) in the aging population. A reduction of hydrogen sulfide ( ... ...

    Abstract Ischemia reperfusion injury (IRI) is a common cause of acute kidney injury (AKI) in the aging population. A reduction of hydrogen sulfide (H
    MeSH term(s) Animals ; Cystathionine gamma-Lyase ; Endothelial Cells ; Hydrogen Sulfide ; Inflammation ; Kidney ; Macrophages ; Mice ; Mice, Inbred C57BL ; MicroRNAs/genetics ; Reperfusion Injury
    Chemical Substances MIRN21 microRNA, mouse ; MicroRNAs ; Cystathionine gamma-Lyase (EC 4.4.1.1) ; Hydrogen Sulfide (YY9FVM7NSN)
    Language English
    Publishing date 2021-01-12
    Publishing country Switzerland
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 2886586-8
    ISSN 2509-2723 ; 2509-2715
    ISSN (online) 2509-2723
    ISSN 2509-2715
    DOI 10.1007/s11357-020-00299-6
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: The role of the mitochondrial trans-sulfuration in cerebro-cardio renal dysfunction during trisomy down syndrome.

    Pushpakumar, Sathnur / Singh, Mahavir / Sen, Utpal / Tyagi, N / Tyagi, Suresh C

    Molecular and cellular biochemistry

    2023  Volume 479, Issue 4, Page(s) 825–829

    Abstract: One in 700 children is born with the down syndrome (DS). In DS, there is an extra copy of X chromosome 21 (trisomy). Interestingly, the chromosome 21 also contains an extra copy of the cystathionine beta synthase (CBS) gene. The CBS activity is known to ... ...

    Abstract One in 700 children is born with the down syndrome (DS). In DS, there is an extra copy of X chromosome 21 (trisomy). Interestingly, the chromosome 21 also contains an extra copy of the cystathionine beta synthase (CBS) gene. The CBS activity is known to contribute in mitochondrial sulfur metabolism via trans-sulfuration pathway. We hypothesize that due to an extra copy of the CBS gene there is hyper trans-sulfuration in DS. We believe that understanding the mechanism of hyper trans-sulfuration during DS will be important in improving the quality of DS patients and towards developing new treatment strategies. We know that folic acid "1-carbon" metabolism (FOCM) cycle transfers the "1-carbon" methyl group to DNA (H3K4) via conversion of s-adenosyl methionine (SAM) to s-adenosyl homocysteine (SAH) by DNMTs (the gene writers). The demethylation reaction is carried out by ten-eleven translocation methylcytosine dioxygenases (TETs; the gene erasers) through epigenetics thus turning the genes off/on and opening the chromatin by altering the acetylation/HDAC ratio. The S-adenosyl homocysteine hydrolase (SAHH) hydrolyzes SAH to homocysteine (Hcy) and adenosine. The Hcy is converted to cystathionine, cysteine and hydrogen sulfide (H
    MeSH term(s) Child ; Humans ; Cystathionine/genetics ; Cystathionine/metabolism ; Down Syndrome/genetics ; Trisomy ; Cysteine ; Sirtuin 3/genetics ; Cystathionine beta-Synthase/genetics ; Cystathionine beta-Synthase/metabolism ; Hydrogen Sulfide/metabolism ; S-Adenosylmethionine ; Superoxide Dismutase/metabolism ; Adenosine ; Kidney Diseases/metabolism ; Folic Acid ; Homocysteine ; Carbon ; Cystathionine gamma-Lyase/genetics ; Cystathionine gamma-Lyase/metabolism
    Chemical Substances Cystathionine (375YFJ481O) ; Cysteine (K848JZ4886) ; Sirtuin 3 (EC 3.5.1.-) ; Cystathionine beta-Synthase (EC 4.2.1.22) ; Hydrogen Sulfide (YY9FVM7NSN) ; S-Adenosylmethionine (7LP2MPO46S) ; Superoxide Dismutase (EC 1.15.1.1) ; Adenosine (K72T3FS567) ; Folic Acid (935E97BOY8) ; Homocysteine (0LVT1QZ0BA) ; Carbon (7440-44-0) ; Cystathionine gamma-Lyase (EC 4.4.1.1)
    Language English
    Publishing date 2023-05-17
    Publishing country Netherlands
    Document type Journal Article ; Review
    ZDB-ID 184833-1
    ISSN 1573-4919 ; 0300-8177
    ISSN (online) 1573-4919
    ISSN 0300-8177
    DOI 10.1007/s11010-023-04761-9
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Glucosidase inhibitor, Nimbidiol ameliorates renal fibrosis and dysfunction in type-1 diabetes.

    Juin, Subir Kumar / Pushpakumar, Sathnur / Tyagi, Suresh C / Sen, Utpal

    Scientific reports

    2022  Volume 12, Issue 1, Page(s) 21707

    Abstract: Diabetic nephropathy is characterized by excessive accumulation of extracellular matrix (ECM) leading to renal fibrosis, progressive deterioration of renal function, and eventually to end stage renal disease. Matrix metalloproteinases (MMPs) are known to ...

    Abstract Diabetic nephropathy is characterized by excessive accumulation of extracellular matrix (ECM) leading to renal fibrosis, progressive deterioration of renal function, and eventually to end stage renal disease. Matrix metalloproteinases (MMPs) are known to regulate synthesis and degradation of the ECM. Earlier, we demonstrated that imbalanced MMPs promote adverse ECM remodeling leading to renal fibrosis in type-1 diabetes. Moreover, elevated macrophage infiltration, pro-inflammatory cytokines and epithelial‒mesenchymal transition (EMT) are known to contribute to the renal fibrosis. Various bioactive compounds derived from the medicinal plant, Azadirachta indica (neem) are shown to regulate inflammation and ECM proteins in different diseases. Nimbidiol is a neem-derived diterpenoid that is considered as a potential anti-diabetic compound due to its glucosidase inhibitory properties. We investigated whether Nimbidiol mitigates adverse ECM accumulation and renal fibrosis to improve kidney function in type-1 diabetes and the underlying mechanism. Wild-type (C57BL/6J) and type-1 diabetic (C57BL/6-Ins2
    MeSH term(s) Mice ; Animals ; Diabetic Nephropathies/pathology ; Diabetes Mellitus, Experimental/complications ; Diabetes Mellitus, Experimental/drug therapy ; Diabetes Mellitus, Experimental/metabolism ; Diabetes Mellitus, Type 1/metabolism ; Mice, Inbred C57BL ; Fibrosis ; Transforming Growth Factor beta1/metabolism ; Kidney/metabolism ; Diterpenes/metabolism ; Inflammation/pathology ; Glucosidases
    Chemical Substances nimbidiol ; Transforming Growth Factor beta1 ; Diterpenes ; Glucosidases (EC 3.2.1.-)
    Language English
    Publishing date 2022-12-15
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 2615211-3
    ISSN 2045-2322 ; 2045-2322
    ISSN (online) 2045-2322
    ISSN 2045-2322
    DOI 10.1038/s41598-022-25848-1
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: GYY4137 Regulates Extracellular Matrix Turnover in the Diabetic Kidney by Modulating Retinoid X Receptor Signaling.

    Juin, Subir Kumar / Pushpakumar, Sathnur / Sen, Utpal

    Biomolecules

    2021  Volume 11, Issue 10

    Abstract: Diabetic kidney is associated with an accumulation of extracellular matrix (ECM) leading to renal fibrosis. Dysregulation of retinoic acid metabolism involving retinoic acid receptors (RARs) and retinoid X receptors (RXRs) has been shown to play a ... ...

    Abstract Diabetic kidney is associated with an accumulation of extracellular matrix (ECM) leading to renal fibrosis. Dysregulation of retinoic acid metabolism involving retinoic acid receptors (RARs) and retinoid X receptors (RXRs) has been shown to play a crucial role in diabetic nephropathy (DN). Furthermore, RARs and peroxisome proliferator-activated receptor γ (PPARγ) are known to control the RXR-mediated transcriptional regulation of several target genes involved in DN. Recently, RAR and RXR have been shown to upregulate plasminogen activator inhibitor-1 (PAI-1), a major player involved in ECM accumulation and renal fibrosis during DN. Interestingly, hydrogen sulfide (H
    MeSH term(s) Animals ; Diabetic Nephropathies/drug therapy ; Diabetic Nephropathies/genetics ; Diabetic Nephropathies/pathology ; Extracellular Matrix/drug effects ; Fibrosis/drug therapy ; Fibrosis/genetics ; Fibrosis/pathology ; Gene Expression Regulation/drug effects ; Humans ; Hydrogen Sulfide/pharmacology ; Kidney/drug effects ; Kidney/pathology ; Mice ; Mice, Inbred NOD ; Morpholines/pharmacology ; Organothiophosphorus Compounds/pharmacology ; PPAR gamma/genetics ; Plasminogen Activator Inhibitor 1/genetics ; Receptors, Retinoic Acid/antagonists & inhibitors ; Receptors, Retinoic Acid/genetics ; Retinoid X Receptors/antagonists & inhibitors ; Retinoid X Receptors/genetics ; Signal Transduction/drug effects ; Tretinoin/metabolism
    Chemical Substances GYY 4137 ; Morpholines ; Organothiophosphorus Compounds ; PPAR gamma ; Plasminogen Activator Inhibitor 1 ; Pparg protein, mouse ; Receptors, Retinoic Acid ; Retinoid X Receptors ; Tretinoin (5688UTC01R) ; Hydrogen Sulfide (YY9FVM7NSN)
    Language English
    Publishing date 2021-10-07
    Publishing country Switzerland
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 2701262-1
    ISSN 2218-273X ; 2218-273X
    ISSN (online) 2218-273X
    ISSN 2218-273X
    DOI 10.3390/biom11101477
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Novel mechanism of the COVID-19 associated coagulopathy (CAC) and vascular thromboembolism.

    Singh, Mahavir / Pushpakumar, Sathnur / Zheng, Yuting / Smolenkova, Irina / Akinterinwa, Oluwaseun E / Luulay, Bana / Tyagi, Suresh C

    Npj viruses

    2023  Volume 1

    Abstract: Previous studies from our laboratory revealed that SARS-CoV-2 spike protein (SP) administration to a genetically engineered model expressing the human angiotensin-converting enzyme 2; ACE2 receptor (i.e., hACE2 humanized mouse) mimicked the coronavirus ... ...

    Abstract Previous studies from our laboratory revealed that SARS-CoV-2 spike protein (SP) administration to a genetically engineered model expressing the human angiotensin-converting enzyme 2; ACE2 receptor (i.e., hACE2 humanized mouse) mimicked the coronavirus disease-19 (COVID-19) pathology. In humans the cause of high morbidity, and mortality is due to '
    Language English
    Publishing date 2023-10-18
    Publishing country England
    Document type Journal Article
    ISSN 2948-1767
    ISSN (online) 2948-1767
    DOI 10.1038/s44298-023-00003-3
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Role of circadian clock system in the mitochondrial trans-sulfuration pathway and tissue remodeling.

    Tyagi, Suresh C / Pushpakumar, Sathnur / Sen, Utpal / Akinterinwa, Oluwaseun E / Zheng, Yuting / Mokshagundam, Sri Prakash L / Kalra, Dinesh K / Singh, Mahavir

    Canadian journal of physiology and pharmacology

    2023  Volume 102, Issue 2, Page(s) 105–115

    Abstract: Previous studies from our laboratory revealed that the gaseous molecule hydrogen sulfide ( ... ...

    Abstract Previous studies from our laboratory revealed that the gaseous molecule hydrogen sulfide (H
    MeSH term(s) Animals ; Mice ; Circadian Clocks ; Hydrogen Sulfide/metabolism ; Cystathionine beta-Synthase ; Muscle, Skeletal/metabolism ; Gels ; Cystathionine gamma-Lyase/metabolism ; Phosphatidylethanolamine N-Methyltransferase
    Chemical Substances Hydrogen Sulfide (YY9FVM7NSN) ; Cystathionine beta-Synthase (EC 4.2.1.22) ; Gels ; Cystathionine gamma-Lyase (EC 4.4.1.1) ; PEMT protein, mouse (EC 2.1.1.17) ; Phosphatidylethanolamine N-Methyltransferase (EC 2.1.1.17)
    Language English
    Publishing date 2023-11-18
    Publishing country Canada
    Document type Journal Article
    ZDB-ID 127527-6
    ISSN 1205-7541 ; 0008-4212
    ISSN (online) 1205-7541
    ISSN 0008-4212
    DOI 10.1139/cjpp-2023-0186
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Collagen receptor- and metalloproteinase-dependent hypertensive stress response in mesangial and glomerular endothelial cells.

    Majumder, Suravi / Amin, Matthew / Pushpakumar, Sathnur / Sen, Utpal

    Molecular and cellular biochemistry

    2020  Volume 466, Issue 1-2, Page(s) 1–15

    Abstract: Progressive alteration of the extracellular matrix (ECM) is the characteristic of hypertensive nephropathy (HN). Both mesangial and endothelial cells have the ability to synthesize and degrade ECM components, including collagens through the activation of ...

    Abstract Progressive alteration of the extracellular matrix (ECM) is the characteristic of hypertensive nephropathy (HN). Both mesangial and endothelial cells have the ability to synthesize and degrade ECM components, including collagens through the activation of matrix metalloproteinases (MMPs) in stress conditions, such as in hypertension. On the other hand, hydrogen sulfide (H
    MeSH term(s) Animals ; Endothelial Cells/metabolism ; Endothelial Cells/pathology ; Glomerular Mesangium/metabolism ; Glomerular Mesangium/pathology ; Hypertension, Renal/metabolism ; Hypertension, Renal/pathology ; Matrix Metalloproteinase 13/metabolism ; Matrix Metalloproteinase 14/metabolism ; Mice ; Receptors, Collagen/metabolism ; Stress, Physiological
    Chemical Substances Mmp14 protein, mouse ; Receptors, Collagen ; Matrix Metalloproteinase 13 (EC 3.4.24.-) ; Mmp13 protein, mouse (EC 3.4.24.-) ; Matrix Metalloproteinase 14 (EC 3.4.24.80)
    Language English
    Publishing date 2020-01-07
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 184833-1
    ISSN 1573-4919 ; 0300-8177
    ISSN (online) 1573-4919
    ISSN 0300-8177
    DOI 10.1007/s11010-019-03680-y
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Renal Denervation Helps Preserve the Ejection Fraction by Preserving Endocardial-Endothelial Function during Heart Failure.

    Pushpakumar, Sathnur / Singh, Mahavir / Zheng, Yuting / Akinterinwa, Oluwaseun E / Mokshagundam, Sri Prakash L / Sen, Utpal / Kalra, Dinesh K / Tyagi, Suresh C

    International journal of molecular sciences

    2023  Volume 24, Issue 8

    Abstract: Renal denervation (RDN) protects against hypertension, hypertrophy, and heart failure (HF); however, it is not clear whether RDN preserves ejection fraction (EF) during heart failure (HFpEF). To test this hypothesis, we simulated a chronic congestive ... ...

    Abstract Renal denervation (RDN) protects against hypertension, hypertrophy, and heart failure (HF); however, it is not clear whether RDN preserves ejection fraction (EF) during heart failure (HFpEF). To test this hypothesis, we simulated a chronic congestive cardiopulmonary heart failure (CHF) phenotype by creating an aorta-vena cava fistula (AVF) in the C57BL/6J wild type (WT) mice. Briefly, there are four ways to create an experimental CHF: (1) myocardial infarction (MI), which is basically ligating the coronary artery by instrumenting and injuring the heart; (2) trans-aortic constriction (TAC) method, which mimics the systematic hypertension, but again constricts the aorta on top of the heart and, in fact, exposes the heart; (3) acquired CHF condition, promoted by dietary factors, diabetes, salt, diet, etc., but is multifactorial in nature; and finally, (4) the AVF, which remains the only one wherein AVF is created ~1 cm below the kidneys in which the aorta and vena cava share the common middle-wall. By creating the AVF fistula, the red blood contents enter the vena cava without an injury to the cardiac tissue. This model mimics or simulates the CHF phenotype, for example, during aging wherein with advancing age, the preload volume keeps increasing beyond the level that the aging heart can pump out due to the weakened cardiac myocytes. Furthermore, this procedure also involves the right ventricle to lung to left ventricle flow, thus creating an ideal condition for congestion. The heart in AVF transitions from preserved to reduced EF (i.e., HFpEF to HFrEF). In fact, there are more models of volume overload, such as the pacing-induced and mitral valve regurgitation, but these are also injurious models in nature. Our laboratory is one of the first laboratories to create and study the AVF phenotype in the animals. The RDN was created by treating the cleaned bilateral renal artery. After 6 weeks, blood, heart, and renal samples were analyzed for exosome, cardiac regeneration markers, and the renal cortex proteinases. Cardiac function was analyzed by echocardiogram (ECHO) procedure. The fibrosis was analyzed with a trichrome staining method. The results suggested that there was a robust increase in the exosomes' level in AVF blood, suggesting a compensatory systemic response during AVF-CHF. During AVF, there was no change in the cardiac eNOS, Wnt1, or β-catenin; however, during RDN, there were robust increases in the levels of eNOS, Wnt1, and β-catenin compared to the sham group. As expected in HFpEF, there was perivascular fibrosis, hypertrophy, and pEF. Interestingly, increased levels of eNOS suggested that despite fibrosis, the NO generation was higher and that it most likely contributed to pEF during HF. The RDN intervention revealed an increase in renal cortical caspase 8 and a decrease in caspase 9. Since caspase 8 is protective and caspase 9 is apoptotic, we suggest that RDN protects against the renal stress and apoptosis. It should be noted that others have demonstrated a role of vascular endothelium in preserving the ejection by cell therapy intervention. In the light of foregoing evidence, our findings also suggest that RDN is cardioprotective during HFpEF via preservation of the eNOS and accompanied endocardial-endothelial function.
    MeSH term(s) Mice ; Animals ; Heart Failure ; Caspase 8 ; Caspase 9 ; beta Catenin ; Stroke Volume ; Mice, Inbred C57BL ; Kidney/pathology ; Myocytes, Cardiac/pathology ; Hypertension/pathology ; Denervation ; Hypertrophy/pathology ; Fibrosis
    Chemical Substances Caspase 8 (EC 3.4.22.-) ; Caspase 9 (EC 3.4.22.-) ; beta Catenin
    Language English
    Publishing date 2023-04-15
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2019364-6
    ISSN 1422-0067 ; 1422-0067 ; 1661-6596
    ISSN (online) 1422-0067
    ISSN 1422-0067 ; 1661-6596
    DOI 10.3390/ijms24087302
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Hydrogen sulfide mitigates skeletal muscle mitophagy-led tissue remodeling via epigenetic regulation of the gene writer and eraser function.

    Singh, Mahavir / Pushpakumar, Sathnur / Zheng, Yuting / Homme, Rubens P / Smolenkova, Irina / Mokshagundam, Sri Prakash L / Tyagi, Suresh C

    Physiological reports

    2022  Volume 10, Issue 16, Page(s) e15422

    Abstract: Ketone bodies (KB) serve as the food for mitochondrial biogenetics. Interestingly, probiotics are known to promote KB formation in the gut (especially those that belong to the Lactobacillus genus). Furthermore, Lactobacillus helps produce folate that ... ...

    Abstract Ketone bodies (KB) serve as the food for mitochondrial biogenetics. Interestingly, probiotics are known to promote KB formation in the gut (especially those that belong to the Lactobacillus genus). Furthermore, Lactobacillus helps produce folate that lowers the levels of homocysteine (Hcy); a hallmark non-proteinogenic amino acid that defines the importance of epigenetics, and its landscape. In this study, we decided to test whether hydrogen sulfide (H
    MeSH term(s) Animals ; Epigenesis, Genetic ; Fibrosis ; Hydrogen Sulfide/metabolism ; Hydrogen Sulfide/pharmacology ; Mice ; Mitophagy ; Muscle, Skeletal/metabolism
    Chemical Substances Hydrogen Sulfide (YY9FVM7NSN)
    Language English
    Publishing date 2022-08-31
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 2724325-4
    ISSN 2051-817X ; 2051-817X
    ISSN (online) 2051-817X
    ISSN 2051-817X
    DOI 10.14814/phy2.15422
    Database MEDical Literature Analysis and Retrieval System OnLINE

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