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  1. Article ; Online: Agricultural drought assessment in dry zones of Tolima, Colombia, using an approach based on water balance and vegetation water stress.

    Hernández-López, Jorge Armando / Andrade, Hernán J / Barrios, Miguel

    The Science of the total environment

    2024  Volume 921, Page(s) 171144

    Abstract: Soil water balance is an essential element to consider for the management of droughts and agricultural land use. It is important to evaluate the water consumption of a crop in each of its phenological phases and the status of water reserves during ... ...

    Abstract Soil water balance is an essential element to consider for the management of droughts and agricultural land use. It is important to evaluate the water consumption of a crop in each of its phenological phases and the status of water reserves during critical hydrologic periods. This study developed an agricultural drought index (Standardized Soil Moisture Deficit Index - SMODI) conceptualized with a water balance model considering the vegetation stress caused by soil moisture deficit. This contribution was based on meteorological information, soil moisture from satellite images, hydrophysical properties of the soil and crop evapotranspiration. Information from 61 weather stations located in the dry zone of Tolima was used for estimating the water balance. SMODI was compared with the most common drought indexes: Standardized Precipitation - Evapotranspiration Index (SPEI), the Palmer Self-Calibrated Drought Index (scPDSI), and other eleven macroclimatic indexes. Pearson's correlation coefficients (r), Tukey's test, and analysis of variance were applied to analyze the degree of association between SMODI and the contrasting indexes on a quarterly basis. SMODI considers factors influencing soil moisture distribution and retention and the water stress thresholds that plants have evolved to withstand during drought periods. Consequently, this integrated approach enhances the assessment of agricultural drought by relying on pertinent physical processes. SMODI identified extremely dry, severe, moderate and normal drought 5 %, 3 %, 20 % and 72 % respectively conditions in areas characterized by Entisols, Inceptisols, and Andisols, where rice and fruit crops and pasturelands are cultivated. The SMODI has a good correlation with macroclimatic indexes (0.70 < r < 0.74).
    MeSH term(s) Humans ; Droughts ; Dehydration ; Colombia ; Agriculture ; Soil
    Chemical Substances Soil
    Language English
    Publishing date 2024-02-22
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 121506-1
    ISSN 1879-1026 ; 0048-9697
    ISSN (online) 1879-1026
    ISSN 0048-9697
    DOI 10.1016/j.scitotenv.2024.171144
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Book ; Online: Paradigmas en seguridad y salud en el trabajo, ergonomía, rehabilitación profesional y reintegro laboral

    Orozco Covarrubias, Víctor Horacio / Rodríguez Muñoz, Christian / López Laverde, Jessica / Ordóñez Hernández, Cecilia Andrea / Calvo Soto, Andrea Patricia / Gómez Ramirez, Esperanza / Daza Arana, Jorge Enrique

    2020  

    Keywords Physiotherapy ; Modelos y teorías de la fisioterapia ; Neurofacilitación del movimiento ; Neuroplasticidad ; Fisioterapia deportiva ; Rehabilitación y discapacidad ; Fisioterapia vascular pulmonar ; Fisioterapia músculo esquelética ; Fisioterapia en el trabajo
    Language 0|s
    Size 1 electronic resource (213-268 pages)
    Publisher Universidad Santiago de Cali
    Publishing place Colombia
    Document type Book ; Online
    Note Spanish ; Open Access
    HBZ-ID HT021610526
    ISBN 978-958-5583-53-5 ; 958-5583-53-4
    Database ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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  3. Book ; Online: Modelos teóricos para fisioterapia

    Calvo Soto, Andrea Patricia / Gómez Ramirez, Esperanza / Daza Arana, Jorge Enrique / soto franco, Ilse / Calero Saa, Pedro Antonio / Carvajal Tello, Nathali / Peña Hernández, Paula Andrea / Perafán González, Diana Yasmín / Orozco Covarrubias, Víctor Horacio / Rodríguez Muñoz, Christian / López Laverde, Jessica / Ordóñez Hernández, Cecilia Andrea

    2020  

    Keywords Physiotherapy ; Modelos y teorías de la fisioterapia ; Neurofacilitación del movimiento ; Neuroplasticidad ; Fisioterapia deportiva ; Rehabilitación y discapacidad ; Fisioterapia vascular pulmonar ; Fisioterapia músculo esquelética ; Fisioterapia en el trabajo
    Language 0|s
    Size 1 electronic resource (1-276 pages)
    Publisher Universidad Santiago de Cali
    Publishing place Colombia
    Document type Book ; Online
    Note Spanish ; Open Access
    HBZ-ID HT021610082
    ISBN 978-958-5583-53-5 ; 958-5583-53-4
    Database ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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  4. Article ; Online: The Effect of Ultrasound on the Extraction and Functionality of Proteins from Duckweed (

    Mirón-Mérida, Vicente Antonio / Soria-Hernández, Cintya / Richards-Chávez, Alejandro / Ochoa-García, Juan Carlos / Rodríguez-López, Jorge Luis / Chuck-Hernández, Cristina

    Molecules (Basel, Switzerland)

    2024  Volume 29, Issue 5

    Abstract: The inclusion of protein in the regular human diet is important for the prevention of several chronic diseases. In the search for novel alternative protein sources, plant-based proteins are widely explored from a sustainable and ecological point of view. ...

    Abstract The inclusion of protein in the regular human diet is important for the prevention of several chronic diseases. In the search for novel alternative protein sources, plant-based proteins are widely explored from a sustainable and ecological point of view. Duckweed (
    MeSH term(s) Humans ; Araceae ; Water Pollutants, Chemical/analysis ; Water/metabolism
    Chemical Substances Water Pollutants, Chemical ; Water (059QF0KO0R)
    Language English
    Publishing date 2024-03-01
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 1413402-0
    ISSN 1420-3049 ; 1431-5165 ; 1420-3049
    ISSN (online) 1420-3049
    ISSN 1431-5165 ; 1420-3049
    DOI 10.3390/molecules29051122
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Risk factors associated with glomerular filtration rate in Mexican adults with type 2 diabetes mellitus.

    Mendoza López, Gloria / Morales Villar, Alva Belen / Tejada Bueno, Andrea Patricia / Lozada Hernández, Jessica / García Cortes, Luis Rey / Maldonado Hernández, Jorge

    Endocrinologia, diabetes y nutricion

    2024  Volume 71, Issue 2, Page(s) 44–52

    Abstract: Introduction: Type 2 diabetes mellitus (T2DM) is related to glomerular filtration rate (GFR) impairment, which is one of the main causes of chronic kidney disease. The objective of this study was to identify the risk factors related to GFR in Mexican ... ...

    Abstract Introduction: Type 2 diabetes mellitus (T2DM) is related to glomerular filtration rate (GFR) impairment, which is one of the main causes of chronic kidney disease. The objective of this study was to identify the risk factors related to GFR in Mexican adults with T2DM, using a validated multiple linear regression model (MLRM), with emphasis in body adiposity, glycemic control, duration of the diabetes and other relevant risk factors.
    Materials and methods: A cross-sectional, analytical, and observational study was carried out in 252 adults with a previous diagnosis of T2DM. Body mass index (BMI) and waist circumference (WC) were determined and a fasting blood sample was collected for glucose, creatinine and HbA1c determinations. GFR was calculated with the Cockcroft-Gault equation adjusted for body surface area. Four MLRM were performed to determine the factors related to the GFR; it was evaluated whether these models complied with the statistical assumptions of the linear regression model.
    Results: The average age of the participants was 60 ± 12 years, 62.3% of them were women. GFR correlated with BMI and WC; age and duration of the diabetes were associated inversely. Model 4 of the MLRM reported a coefficient of determination of 53.5% where the variables BMI (β = 1.31), male sex (β = -6.01), duration of T2DM (β = -0.57), arterial hypertension (β = -6.53) and age (β = -1.45) were simultaneously and significantly related to the GFR.
    Conclusions: Older age, male sex, longer duration of T2DM and the presence of arterial hypertension were associated with a decrease in the GFR; BMI and WC were directly associated. No effect of glucose and HbA1c on GFR was observed.
    MeSH term(s) Adult ; Humans ; Male ; Female ; Middle Aged ; Aged ; Diabetes Mellitus, Type 2/complications ; Glomerular Filtration Rate ; Glycated Hemoglobin ; Cross-Sectional Studies ; Risk Factors ; Hypertension/epidemiology ; Hypertension/complications ; Glucose
    Chemical Substances Glycated Hemoglobin ; Glucose (IY9XDZ35W2)
    Language English
    Publishing date 2024-03-15
    Publishing country Spain
    Document type Observational Study ; Journal Article
    ISSN 2530-0180
    ISSN (online) 2530-0180
    DOI 10.1016/j.endien.2024.03.003
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Book ; Online: Lenguajeando mediación pedagógica

    Olaya Garcerá, Jorge Eliécer / Fajardo Guevara, Carlos / Prado Rojas, Cruz / Delgado Martínez, Edinson / Piña Lobos, Luis Alberto / Iribarren Castro, Leonardo Alonso / Sanabria Jiménez, Mercedes / Manrique Hernández, Gloria Divia / Vásquez Gómez, Dora Teresa / Betancourt Ramírez, Marisol Edilma / Peña Cano, Flor Marina / Gallo Bedoya, Linda / Bermudez, Julio Cesar / Grande Ladino, Mauricio / López Delgado, Pedro Mario

    2020  

    Keywords Education ; Mediación ; Realidad ; Comunidad ; Sustentable ; Afrocolombianos ; Identificación ; Recuperación ; Región Pacífico ; Valores Ancestrales ; Cognición ; Desarrollo humano ; Conocer ; Educarse ; Hermenéutica ; Sensorialidad ; Expresión ; Lenguajes ; Diversidad cultural ; Cartografía social ; Mapa parlante
    Language 0|s
    Size 1 electronic resource (1-146 pages)
    Publisher Universidad Santiago de Cali
    Publishing place Colombia
    Document type Book ; Online
    Note Spanish ; Open Access
    HBZ-ID HT021614807
    ISBN 978-958-5583-63-4 ; 958-5583-63-1
    Database ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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  7. Article ; Online: Where are the Penaeids crustins?

    Martinez-Porchas, Marcel / Hernández-López, Jorge / Vargas-Albores, Francisco

    PeerJ

    2023  Volume 11, Page(s) e15596

    Abstract: Crustins are antimicrobial peptides and members of the four-disulfide core (4-DSC) domain-containing proteins superfamily. To date, crustins have only been reported in crustaceans and possess a structural signature characterized by a single 4-DSC domain ... ...

    Abstract Crustins are antimicrobial peptides and members of the four-disulfide core (4-DSC) domain-containing proteins superfamily. To date, crustins have only been reported in crustaceans and possess a structural signature characterized by a single 4-DSC domain and one cysteine-rich region. The high-throughput sequencing technologies have produced vastly valuable genomic information that sometimes dilutes information about previously sequenced molecules. This study aimed (1) to corroborate the loss of valuable descriptive information regarding crustin identification when high throughput sequencing carries out automatic annotation processes and (2) to detect possible crustin sequences reported in Penaeids to attempt a list considering structural similarities, which allows the establishment of phylogenetic relationships based on molecular characteristics. All crustins sequences reported in Penaeids and registered in the databases were obtained. The first list was made with the proteins reported as crustin or carcinin, excluding those that did not meet the structural characteristics. Subsequently, using local alignments, sequences were sought with high similarity even if they had been reported with a different name of crustin but with a probability of being crustin. This broader list, including proteins with high structural similarity, can help establish phylogenetic relationships of shrimp genes and the evolutionary trajectory of this antimicrobial distributed exclusively among crustaceans. Results revealed that in most sequences obtained by Sanger or transcriptomics, which met the structural criteria, the identification was correctly established as crustin. Contrarily, the sequences corresponding to crustins obtained by whole genome sequencing projects were incorrectly classified or not characterized, being momentarily "buried" in the information generated. In addition, the sequences that complied with the criteria of crustin tended to be grouped into species separated by geographical regions; for example, the crustins of the inhabitant shrimp of the American coasts differ from those corresponding to the natives of the Asian coasts. Finally, the results suggest the convenience of annotations considering the previous but correct information, even if such information was generated with previous technologies.
    MeSH term(s) Antimicrobial Cationic Peptides ; Antimicrobial Peptides ; Phylogeny ; Penaeidae/genetics ; Asia
    Chemical Substances Antimicrobial Cationic Peptides ; Antimicrobial Peptides ; crustin
    Language English
    Publishing date 2023-07-20
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2703241-3
    ISSN 2167-8359 ; 2167-8359
    ISSN (online) 2167-8359
    ISSN 2167-8359
    DOI 10.7717/peerj.15596
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Maize CDKA2;1a and CDKB1;1 kinases have different requirements for their activation and participate in substrate recognition.

    López-Hernández, Mingyar N / Vázquez-Ramos, Jorge M

    The FEBS journal

    2022  Volume 290, Issue 9, Page(s) 2463–2488

    Abstract: Cyclin-dependent kinases (CDKs), in association with cyclins, control cell cycle progression by phosphorylating a large number of substrates. In animals, activation of CDKs regularly requires both the association with a cyclin and then phosphorylation of ...

    Abstract Cyclin-dependent kinases (CDKs), in association with cyclins, control cell cycle progression by phosphorylating a large number of substrates. In animals, activation of CDKs regularly requires both the association with a cyclin and then phosphorylation of a highly conserved threonine residue in the CDK activation loop (the classical mechanism), mediated by a CDK-activating kinase (CAK). In addition to this typical mechanism of activation, some CDKs can also be activated by the association of a cyclin to a monomeric CDK previously phosphorylated by CAK although not all CDKs can be activated by this mechanism. In animals and yeast, cyclin, in addition to being required for CDK activation, provides substrate specificity to the cyclin/CDK complex; however, in plants both the mechanisms of CDKs activation and the relevance of the CDK-associated cyclin for substrate targeting have been poorly studied. In this work, by co-expressing proteins in E. coli, we studied maize CDKA2;1a and CDKB1;1, two of the main types of CDKs that control the cell cycle in plants. These kinases could be activated by the classical mechanism and by the association of CycD2;2a to a phosphorylated intermediate in its activation loop, a previously unproven mechanism for the activation of plant CDKs. Unlike CDKA2;1a, CDKB1;1 did not require CAK for its activation, since it autophosphorylated in its activation loop. Phosphorylation of CDKB1;1 and association of CycD2;2 was not enough for its full activation as association of maize CKS, a scaffolding protein, differentially stimulated substrate phosphorylation. Our results suggest that both CDKs participate in substrate recognition.
    MeSH term(s) Animals ; Protein Serine-Threonine Kinases/metabolism ; Zea mays/genetics ; Escherichia coli/metabolism ; Cyclin-Dependent Kinases/metabolism ; Cyclins/genetics ; Cyclins/metabolism ; Saccharomyces cerevisiae/metabolism
    Chemical Substances Protein Serine-Threonine Kinases (EC 2.7.11.1) ; Cyclin-Dependent Kinases (EC 2.7.11.22) ; Cyclins
    Language English
    Publishing date 2022-10-26
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2173655-8
    ISSN 1742-4658 ; 1742-464X
    ISSN (online) 1742-4658
    ISSN 1742-464X
    DOI 10.1111/febs.16659
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Accuracy of Narrow-Band Imaging International Colorectal Endoscopic Classification for Predicting the Histology of Colon Polyps by Experienced Endoscopists and Trainees.

    Mena-Ramírez, Ramón / Macari-Jorge, Andres / Juárez-Hernández, Eva / Uribe, Misael / López-Méndez, Iván

    The Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology

    2023  Volume 34, Issue 8, Page(s) 866–872

    Abstract: Background/aims: Digital chromoendoscopy has proven to be useful in the histological prediction of premalignant lesions in the colon. The aim of the study was to describe the diagnostic performance of Narrow-Band Imaging International Colorectal ... ...

    Abstract Background/aims: Digital chromoendoscopy has proven to be useful in the histological prediction of premalignant lesions in the colon. The aim of the study was to describe the diagnostic performance of Narrow-Band Imaging International Colorectal Endoscopic Classification in the histological differentiation of colonic lesions, applied by expert endoscopists and trainees.
    Materials and methods: Cross-sectional study that includes high-definition endoscopic images and histopathological reports of 94 patients over 50 years. Images were evaluated and classified as Narrow-Band Imaging International Colorectal Endoscopic 1, 2, or 3 by 2 experts and 2 trainee endoscopists, all of them blinded to histological results. Diagnostic accuracy for each Narrow-Band Imaging International Colorectal Endoscopic category was calculated for trainees and expert endoscopists. Intra-observer agreement was evaluated by means of Cohen's kappa coefficient; meanwhile, inter-observer agreement was calculated by means of Fleiss' kappa.
    Results: Evaluations performed by expert and trainee endoscopists showed a performance for Narrow-Band Imaging International Colorectal Endoscopic category 1: sensitivity 62%, specificity 85%, area under receiver operator characteristic 0.73; Narrow-Band Imaging International Colorectal Endoscopic category 2: sensitivity 61%, specificity 73%, area under receiver operator characteristic 0.66; and Narrow-Band Imaging International Colorectal Endoscopic category 3: sensitivity 88%, specificity 91%, area under receiver operator characteristic 0.86. The total agreement of the evaluations was 72.5%, with an inter-observer variability of K 0.60 (95% CI 0.52-0.74). When the diagnostic performance for non-dysplastic lesions and dysplastic lesions (Narrow-Band Imaging International Colorectal Endoscopic 1 vs 2 and 3) was compared, we observed an increase in sensitivity for differentiated adenomas (Narrow-Band Imaging International Colorectal Endoscopic 2).
    Conclusion: Narrow-Band Imaging International Colorectal Endoscopic Classification applied in the histological prediction of static images of colonic lesions has a good diagnostic performance for Narrow-Band Imaging International Colorectal Endoscopic category 3, as well as an acceptable performance for Narrow-Band Imaging International Colorectal Endoscopic category 1, with a moderate agreement among observers.
    MeSH term(s) Humans ; Colonoscopy/methods ; Cross-Sectional Studies ; Colonic Polyps/diagnostic imaging ; Colonic Polyps/pathology ; Narrow Band Imaging/methods ; Colorectal Neoplasms/diagnostic imaging ; Colorectal Neoplasms/pathology
    Language English
    Publishing date 2023-08-02
    Publishing country Turkey
    Document type Journal Article
    ZDB-ID 1340275-4
    ISSN 2148-5607 ; 1300-4948
    ISSN (online) 2148-5607
    ISSN 1300-4948
    DOI 10.5152/tjg.2023.22854
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article: Reference intervals of biochemical parameters in Chilean adults.

    Letelier, Pablo / Acuña, Rodban / Garrido, Ignacio / López, Jorge / Sanhueza, Guillermo / Seguel, Caren / Riquelme, Ismael / Guzmán, Neftalí / Hernández, Alfonso H

    Journal of medical biochemistry

    2024  Volume 43, Issue 1, Page(s) 133–143

    Abstract: Background: Establishing reference intervals (RIs) in clinical laboratories is essential, as these can vary due to inter-individual variability as well as the analytical methods used. The purpose of this study was to determine RIs for markers and ratios ...

    Abstract Background: Establishing reference intervals (RIs) in clinical laboratories is essential, as these can vary due to inter-individual variability as well as the analytical methods used. The purpose of this study was to determine RIs for markers and ratios biochemical in apparently healthy Chilean adults.
    Methods: A sample of 1,143 data was selected from the Universidad Católica de Temuco, Clinical Laboratory database, La Araucanía Region, Chile, which were analysed by sex. The Tukey's Fences was used to detect outliers and the RIs were established using the non-parametric method.
    Language English
    Publishing date 2024-03-01
    Publishing country Serbia
    Document type Journal Article
    ZDB-ID 2387367-X
    ISSN 1452-8258
    ISSN 1452-8258
    DOI 10.5937/jomb0-44156
    Database MEDical Literature Analysis and Retrieval System OnLINE

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