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  1. Article: Editorial: Hepatocellular carcinoma: from personalized medicine to practical guidelines.

    El-Nakeep, Sarah / Kasi, Anup

    Frontiers in pharmacology

    2023  Volume 14, Page(s) 1301202

    Language English
    Publishing date 2023-11-02
    Publishing country Switzerland
    Document type Editorial
    ZDB-ID 2587355-6
    ISSN 1663-9812
    ISSN 1663-9812
    DOI 10.3389/fphar.2023.1301202
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Molecular and genetic markers in hepatocellular carcinoma:

    El-Nakeep, Sarah

    World journal of gastrointestinal pathophysiology

    2021  Volume 13, Issue 1, Page(s) 1–14

    Abstract: Hepatocellular carcinoma (HCC) is the second cause of cancer-related mortality. The diagnosis of HCC depends mainly on -fetoprotein, which is limited in its diagnostic and screening capabilities. There is an urgent need for a biomarker that detects early ...

    Abstract Hepatocellular carcinoma (HCC) is the second cause of cancer-related mortality. The diagnosis of HCC depends mainly on -fetoprotein, which is limited in its diagnostic and screening capabilities. There is an urgent need for a biomarker that detects early HCC to give the patients a chance for curative treatment. New targets of therapy could enhance survival and create future alternative curative methods.
    Language English
    Publishing date 2021-07-22
    Publishing country United States
    Document type Editorial
    ZDB-ID 2583474-5
    ISSN 2150-5330
    ISSN 2150-5330
    DOI 10.4291/wjgp.v13.i1.1
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: To Vaccinate or not to Vaccinate; That is the Question! (New Insights into COVID-19 Vaccination).

    El-Nakeep, Sarah

    Current molecular medicine

    2021  Volume 22, Issue 7, Page(s) 567–571

    Abstract: Objective: This mini-review of literature aimed to discuss the obstacles and benefits of vaccination in the era of the current pandemic, either the COVID-19 vaccines, which are on their way to be released, or the influenza vaccines, regarding which much ...

    Abstract Objective: This mini-review of literature aimed to discuss the obstacles and benefits of vaccination in the era of the current pandemic, either the COVID-19 vaccines, which are on their way to be released, or the influenza vaccines, regarding which much debate is ongoing concerning their effectiveness for ameliorating the severity of the COVID-19 pandemic.
    Methodology: A literature search was done till November 2020 in the PubMed database.
    Results: Pathophysiology behind the COVID-19 vaccination, the related obstacles and future perspectives are discussed in detail. Discussion on influenza vaccination during the pandemic, along with the most recent guidelines, is also presented.
    Conclusion: During the COVID-19 pandemic, influenza vaccination is mandatory for all individuals, provided that there are no contraindications. Three SARS-CoV-2 vaccines are being released till the time being, while FDA approval for monoclonal antibodies for the treatment of at-risk outpatients to lower hospitalization rates is ongoing.
    MeSH term(s) COVID-19/prevention & control ; COVID-19 Vaccines/therapeutic use ; Humans ; Influenza, Human/epidemiology ; Influenza, Human/prevention & control ; Pandemics/prevention & control ; SARS-CoV-2 ; Vaccination
    Chemical Substances COVID-19 Vaccines
    Language English
    Publishing date 2021-05-11
    Publishing country Netherlands
    Document type Journal Article ; Review
    ZDB-ID 2064873-X
    ISSN 1875-5666 ; 1566-5240
    ISSN (online) 1875-5666
    ISSN 1566-5240
    DOI 10.2174/1566524021666210512012315
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Stem Cell Therapy for the Treatment of Crohn's Disease; Current Obstacles and Future Hopes.

    El-Nakeep, Sarah

    Current stem cell research & therapy

    2021  Volume 17, Issue 8, Page(s) 727–733

    Abstract: Background: Crohn's disease (CD) is an autoimmune disease of the gastrointestinal tract, characterized by relapsing and remitting courses. The disease is debilitating in nature with three prominent phenotypic clinical presentations; fistulizing, ... ...

    Abstract Background: Crohn's disease (CD) is an autoimmune disease of the gastrointestinal tract, characterized by relapsing and remitting courses. The disease is debilitating in nature with three prominent phenotypic clinical presentations; fistulizing, stenosing, and inflammatory. Stem cells offer new hope for CD patients by modifying the immune response and progression of the healing process.
    Aim: This mini-review discusses the role of stem cells in treating CD, their effectiveness as a new therapy and their current limitations.
    Methods: The author conducted a literature review on recent randomized controlled trials and cohort studies concerned with the topic in question using the following keywords (Crohn's Disease, perianal fistula, Stem cell therapy, mesenchymal stem cells, remission).
    Results: Clinical trials show that the stem cells are more effective in the CD-associated complex perianal fistula than the CD enteritis. At present, there are no standardized guidelines regarding dose of stem cells used, number of doses administered, route of administration, type of stem cells used. Only one group of researchers proposed a standardized procedure for injecting mesenchymal stem cells in complex perianal fistula, according to their own experience in clinical trials. Moreover, mesenchymal stem cells and their related types (placental, adipose tissue, umbilical tissue, etc.) are the safest and effective in clinical trials. Currently, the commercially available mesenchymal stem cells preparation (Darvadstrocel (Cx601)) is the only one approved by The United States Food and Drug Administration (FDA) for clinical use in refractory CD associated complex perianal fistula.
    Conclusion: Stem cell therapy (SCT) shows promise in inducing remission in refractory Crohn's colitis, and perianal fistula, but further research is required before SCT could be applied to clinical practice guidelines.
    MeSH term(s) Crohn Disease/therapy ; Female ; Humans ; Mesenchymal Stem Cell Transplantation/methods ; Placenta ; Pregnancy ; Rectal Fistula/therapy ; Treatment Outcome
    Language English
    Publishing date 2021-09-13
    Publishing country United Arab Emirates
    Document type Journal Article ; Review
    ZDB-ID 2251937-3
    ISSN 2212-3946 ; 1574-888X
    ISSN (online) 2212-3946
    ISSN 1574-888X
    DOI 10.2174/1574888X16666210910112403
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Editorial

    Sarah El-Nakeep / Anup Kasi

    Frontiers in Pharmacology, Vol

    Hepatocellular carcinoma: from personalized medicine to practical guidelines

    2023  Volume 14

    Keywords HCC ; personalized medicine ; molecular pathway ; biomarkers ; current guidelines ; Therapeutics. Pharmacology ; RM1-950
    Language English
    Publishing date 2023-11-01T00:00:00Z
    Publisher Frontiers Media S.A.
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  6. Article ; Online: Radical versus Local Surgical Excision for Early Rectal Cancer: A Systematic Review and Meta-Analysis.

    El-Nakeep, Sarah / Madala, Samragnyi / Chidharla, Anusha / Surapaneni, Balarama Krishna / Saha, Subhrajit / Martin, Benjamin / Kasi, Anup

    Archives of internal medicine research

    2024  Volume 7, Issue 1, Page(s) 1–11

    Abstract: Background: Radical excision (RE) for rectal cancer carries a higher risk of mortality and morbidity, while local excision (LE) could decrease these postoperative risks. However, the long-term benefit of LE is still debatable.: Aim: To study the ... ...

    Abstract Background: Radical excision (RE) for rectal cancer carries a higher risk of mortality and morbidity, while local excision (LE) could decrease these postoperative risks. However, the long-term benefit of LE is still debatable.
    Aim: To study the effectiveness of LE versus RE in T1 and T2 rectal cancer.
    Methods: A systematic review and meta-analysis was conducted using key databases like PubMed and ClinicalTrials.gov. Only cohort studies and randomized controlled trials were included. RevMan 5.4 tool was used for data analysis. Both clinical and statistical heterogeneity of the studies were assessed, and I
    Results: A total of 18 studies were included for final meta-analysis. Four were RCTs, while the other 15 were retrospective cohort studies. One included study had data from both RCT and non-RCT study groups. Nine studies were multicentered or national studies while nine were unicentral.There was no difference in risk ratio (RR) between OS: RR 0.95, 95% Confidence Interval (CI) [0.91, 0.99] and DFS: RR 0.93, 95% CI [0.87, 1.01]. There were lower hazards ratios in OS: RR 1.41, 95% CI [1.14, 1.74] and DFS: RR 1.95, 95% CI [1.36, 2.78] with radical, as compared to LE. Lower recurrence rate was associated with RE. Random effect model was used due to clinical heterogeneity between studies (different surgical procedures, tumor staging, adjuvant chemo or radiotherapy).
    Conclusions: LE for early-stage rectal cancer has lower 5-year OS and DFS than RE, with higher local recurrence rate. However, LE is associated with lower early postoperative mortality, morbidity and length of stay as compared to RE.
    Language English
    Publishing date 2024-01-20
    Publishing country United States
    Document type Journal Article
    ISSN 2688-5654
    ISSN (online) 2688-5654
    DOI 10.26502/aimr.0160
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: New stem cell autophagy surrogate diagnostic biomarkers in early-stage hepatocellular carcinoma in Egypt: A pilot study.

    Yosef, Tarek / Ibrahim, Wesam Ahmed / Matboli, Marwa / Swilam, Amina Ahmed / El-Nakeep, Sarah

    World journal of hepatology

    2022  Volume 13, Issue 12, Page(s) 2137–2149

    Abstract: Background: Stem cell autophagy disruption is responsible for the development of hepatocellular carcinoma (HCC). Many non-coding RNAs are linked to the activation and inhibition of certain genes. The : Aim: To determine whether serum microRNA, hsa- ... ...

    Abstract Background: Stem cell autophagy disruption is responsible for the development of hepatocellular carcinoma (HCC). Many non-coding RNAs are linked to the activation and inhibition of certain genes. The
    Aim: To determine whether serum microRNA, hsa-miR-519d, is linked to
    Methods: In silico
    Results: Hsa-miR-519d-3p was significantly upregulated in patients with HCC compared with those with chronic liver disease and healthy subjects with an area under the curve (AUC) of 0.939, with cutoff value 8.34, sensitivity of 91.2%, and specificity of 81.8%.
    Conclusion: This study is the first to show a direct relation between
    Language English
    Publishing date 2022-01-13
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2573703-X
    ISSN 1948-5182
    ISSN 1948-5182
    DOI 10.4254/wjh.v13.i12.2137
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article: The effect of different direct antivirals on hepatic steatosis in nondiabetic and naïve hepatitis C-infected Egyptian patients.

    El-Ghandour, Ahmed / Youssif, Tarek / Ibrahim, Wesam / Abdelsattar, Hoda Ahmed / Bawady, Somia Abd Elhamid / Wagih, Mariam / El-Nakeep, Sarah

    The Egyptian journal of internal medicine

    2023  Volume 35, Issue 1, Page(s) 12

    Abstract: ... in the Gastroenterology and Hepatology Department, Ain Shams University, and Kobry El Koba Military Hospital. The patients ...

    Abstract Background: Hepatitis C is associated with metabolic effects and fatty liver disease. The effect of different direct antivirals on the liver steatosis, and the metabolic profile, still needs to be established. The aim of this study is to determine the effect of achieving the sustained virological response after 12 weeks (SVR-12 weeks) with different combinations of direct antiviral drugs, on the hepatic steatosis, and fibrosis presented by laboratory and transient elastography parameters. Our study population is nondiabetic, chronically infected HCV Egyptian patients and naïve to any form of HCV treatment.
    Methods: This cohort study was carried on 100 nondiabetic HCV treatment-naïve patients attending the Hepatology Clinic, in the Gastroenterology and Hepatology Department, Ain Shams University, and Kobry El Koba Military Hospital. The patients were divided into four groups according to their treatment regimens as follows: group A: 25 patients who received sofosbuvir (400 mg) and daclatasvir (60 mg) daily for 12 weeks; group B: 25 patients who received sofosbuvir (400 mg) and ledipasvir (90 mg) daily for 12 weeks; group C: 25 patients who received ombitasvir (12.5 mg), paritaprevir (75 mg), and ritonavir (50 mg) daily for 12 weeks; and group D: 25 patients who received sofosbuvir (400 mg) and simeprevir (150 mg) daily for 12 weeks. All patients were subjected to the following investigations: HCV quantitative PCR before and after 12 weeks of treatment, clinical and laboratory metabolic evaluation including alfa-fetoprotein level, thyroid profile assessment, ferritin level, pelvi-abdominal ultrasound, and FibroScan examination.
    Results: All patients achieved SVR after 12 weeks. FibroScan median decreased (
    Conclusions: DAAs affect the metabolic profile of the treated patients. There is a noticed improvement in the FibroScan, NAFLD score, and lipid profile after achieving the SVR-12 weeks. However, LDL is increased after viral cure, mostly due to viral-host molecular interaction.
    Language English
    Publishing date 2023-02-13
    Publishing country England
    Document type Journal Article
    ISSN 1110-7782
    ISSN 1110-7782
    DOI 10.1186/s43162-023-00197-1
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Stem cell transplantation for induction of remission in medically refractory Crohn's disease.

    El-Nakeep, Sarah / Shawky, Ahmed / Abbas, Sara F / Abdel Latif, Osama

    The Cochrane database of systematic reviews

    2022  Volume 5, Page(s) CD013070

    Abstract: Background: Crohn's disease (CD) is an inflammatory bowel disease that causes inflammation and stricture, of any part of the mucosa and the gut wall. It forms skip lesions, sparing the areas in between the affected parts of the gastrointestinal tract. ... ...

    Abstract Background: Crohn's disease (CD) is an inflammatory bowel disease that causes inflammation and stricture, of any part of the mucosa and the gut wall. It forms skip lesions, sparing the areas in between the affected parts of the gastrointestinal tract. Crohn's disease could have one of three complications; fistula, intestinal obstruction due to stricture, or gastrointestinal inflammation presenting as severe diarrhoea. Stem cell therapy (SCT) is an innovative treatment that has been recently used in CD. The exact role of SCT in CD is still unclear. Stem cells modify the immunity of the patients or act as a "reset tool" for the immune system as in the case of systemically-injected stem cells, or regenerate the affected area of necrotic and inflammatory tissue as in the case of local injection into the lesion. Stem cells are a wide variety of cells including pluripotent stem cells or differentiated stem cells. The hazards range from rejection to symptomatic manifestations as fever or increase infection.  OBJECTIVES: The objective of this Cochrane systematic review is to assess the effects of stem cell transplantation compared to standard of care alone or with placebo on efficacy and safety outcomes in patients with refractory CD.
    Search methods: We searched MEDLINE, Embase, Cochrane Central Register of Controlled Trials (CENTRAL), and clinical trial registries (Clinicaltrials.gov, World Health Organization-International Clinical Trials Registry Platform WHO ICTRP) from inception to 19 March 2021, without any language, publication year, or publication status restrictions. In addition, we searched references of included studies and review articles for further references. An update of the published studies was done during the writing of the review.
    Selection criteria: We included only randomised controlled trials (RCTs) that assessed the effectiveness and safety of SCT in refractory CD versus standard care alone (control) or with placebo.
    Data collection and analysis: Two review authors (SEN and SFA) independently screened the studies retrieved from the search results for inclusion, extracted data and assessed the risk of bias. Any disagreement was resolved through a consensus between the authors. We used standard methodological procedures expected by Cochrane.
    Main results: We conducted our search on 19 March 2021 and identified 639 records. We added two records by a manual search of the published reviews on the topic to a total of 641 records. The Covidence program removed 125 duplicates making a total of 516 reports. Two review authors (SEN and SFA) screened titles and abstracts and excluded 451 records with the remaining 65 for full-text records screened independently by the two authors; only 18 studies were considered for inclusion.  We included seven RCTs with a total of 442 participants for the meta-analysis. The intervention group included 234 patients, and the control group included 208 patients. Nine trials are ongoing and, two abstracts are awaiting classification. All patients in the control and intervention groups received the standard therapy for CD. Only three studies used blinding methods for the control group in the form of a placebo, with one study of the three stated that the blinding method was inefficient. The patients and personnel were aware of the intervention in the rest of the four studies as they were open-label trials. However, the effect of unblinding was balanced by the low risk of detection bias in five of the included studies. The evidence is uncertain about the effect of SCT on achieving clinical remission as compared to control/placebo (risk ratio (RR) 1.88, 95% Confidence Interval (CI) 0.80 to 4.41; 3 studies; low-certainty evidence). The evidence is very uncertain about the effect of SCT on achieving Crohn's Disease Activity Index (CDAI) <150 at 24 weeks compared to control (RR1.02 95% CI 0.67 to 1.56; 4 studies; very-low certainty evidence). SCT is likely to achieve fistula closure as compared to the control/placebo both in the short term (RR 1.48, 95% CI 1.12 to 1.96); low-certainty evidence) and in the long term (RR 1.42, 95% CI 1.09 to 1.87; 4 studies; low-certainty evidence) follow-up. The evidence is very uncertain about the effect of SCT to cause no difference in the number of total adverse events as compared to the control/placebo (RR 0.99, 95% CI [0.88 to  1.13); 4 studies; very-low-certainty evidence). However, SCT is likely to increase the number of serious adverse events as compared to the control/placebo (RR 1.22, 95% CI 0.88 to 1.67; 7 studies; low-certainty evidence). The evidence is very uncertain about the effect of SCT to decrease the withdrawal due to adverse events as compared to the control/placebo (RR 0.78, 95% CI 0.32 to 1.89; 3 studies; very-low certainty evidence). Funding by pharmaceutical companies was found in three studies, with one including more than 50% of our studied population.
    Authors' conclusions: SCT shows an uncertain effect on clinical remission with low certainty of evidence. SCT shows an uncertain effect on CDAI score to reach <150 after 24 weeks of treatment, with very low certainty evidence. SCT shows beneficial effects on fistula-closure during short and long-term follow-up with low-certainty evidence in both outcomes. There was no change in the total number of adverse events with SCT as compared to control, with very low certainty evidence. While there was a moderate effect on increasing the number of serious adverse events in the SCT group, as compared to the control with low-certainty evidence. Withdrawal due to adverse events was slightly higher in the control group with very low certainty evidence. All the participants were refractory to standard medical treatment, but the number of participants was small, this may limit the generalizability of the results. Further research is needed for validation. More objective outcomes are needed in the assessment of stem cell effectiveness in the treatment of Crohn's disease, especially the intestinal CD subtype; with standardization of the dose, methods of stem cell preparation, route of administration, and inclusion criteria to the studies to achieve clear results.
    MeSH term(s) Constriction, Pathologic ; Crohn Disease/drug therapy ; Hematopoietic Stem Cell Transplantation ; Humans ; Inflammation ; Remission Induction
    Language English
    Publishing date 2022-05-13
    Publishing country England
    Document type Journal Article ; Meta-Analysis ; Review ; Research Support, Non-U.S. Gov't ; Systematic Review
    ISSN 1469-493X
    ISSN (online) 1469-493X
    DOI 10.1002/14651858.CD013070.pub2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Cyanidin 3-glucoside modulated cell cycle progression in liver precancerous lesion,

    Matboli, Marwa / Hasanin, Amany H / Hussein, Reham / El-Nakeep, Sarah / Habib, Eman K / Ellackany, Rawan / Saleh, Lobna A

    World journal of gastroenterology

    2021  Volume 27, Issue 14, Page(s) 1435–1450

    Abstract: Background: Cyanidin-3-O-glucoside (cyan) exhibits antioxidant and anticancer properties. The cell cycle proteins and antimitotic drugs might be promising therapeutic targets in hepatocellular carcinoma.: Aim: To investigate the effect of cyan ... ...

    Abstract Background: Cyanidin-3-O-glucoside (cyan) exhibits antioxidant and anticancer properties. The cell cycle proteins and antimitotic drugs might be promising therapeutic targets in hepatocellular carcinoma.
    Aim: To investigate the effect of cyan administration on cell cycle in hepatic precancerous lesion (PCL) induced by diethylnitrosamine/2-acetylaminofluorene (DEN/2-AAF) in Wistar rats.
    Methods: In vivo
    Results: Cyan administration mitigated the effect of DEN/2-AFF induced PCL, decreased AFP levels, and improved liver function. Remarkably, treatment with cyan dose dependently decreased the long non-coding RNA MALAT1 and tubulin gamma 1 mRNA expressions and increased the levels of miR-125b, all of which are involved in cell cycle and mitotic spindle assembly. Of note, cyan decreased GSTP foci percent area and PCNA positively stained nuclei.
    Conclusion: Our results indicated that cyan could be used as a potential therapeutic agent to inhibit liver carcinogenesis in rat model
    MeSH term(s) Animals ; Anthocyanins ; Diethylnitrosamine/toxicity ; Female ; Glucosides/pharmacology ; Glutathione Transferase ; Liver ; Liver Neoplasms ; Liver Neoplasms, Experimental/chemically induced ; Liver Neoplasms, Experimental/drug therapy ; Precancerous Conditions/chemically induced ; Precancerous Conditions/drug therapy ; Pregnancy ; Rats ; Rats, Wistar
    Chemical Substances Anthocyanins ; Glucosides ; Diethylnitrosamine (3IQ78TTX1A) ; cyanidin (7732ZHU564) ; Glutathione Transferase (EC 2.5.1.18)
    Language English
    Publishing date 2021-04-29
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2185929-2
    ISSN 2219-2840 ; 1007-9327
    ISSN (online) 2219-2840
    ISSN 1007-9327
    DOI 10.3748/wjg.v27.i14.1435
    Database MEDical Literature Analysis and Retrieval System OnLINE

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