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  1. Article ; Online: A correction to the research article titled: "Amplification of the driving oncogene, KRAS or BRAF, underpins acquired resistance to MEK1/2 inhibitors in colorectal cancer cells" by A. S. Little, K. Balmanno, M. J. Sale, S. Newman, J. R. Dry, M. Hampson, P. A. W. Edwards, P. D. Smith, S. J. Cook.

    Little, Annette S / Balmanno, Kathryn / Sale, Matthew J / Newman, Scott / Dry, Jonathan R / Hampson, Mark / Edwards, Paul A W / Smith, Paul D / Cook, Simon J

    Science signaling

    2011  Volume 4, Issue 170, Page(s) er2

    Abstract: The acquisition of resistance to protein kinase inhibitors is a growing problem in cancer treatment. We modeled acquired resistance to the MEK1/2 (mitogen-activated or extracellular signal–regulated protein kinase kinases 1 and 2) inhibitor selumetinib ( ... ...

    Abstract The acquisition of resistance to protein kinase inhibitors is a growing problem in cancer treatment. We modeled acquired resistance to the MEK1/2 (mitogen-activated or extracellular signal–regulated protein kinase kinases 1 and 2) inhibitor selumetinib (AZD6244) in colorectal cancer cell lines harboring mutations in BRAF (COLO205 and HT29 lines) or KRAS (HCT116 and LoVo lines). AZD6244-resistant derivatives were refractory to AZD6244-induced cell cycle arrest and death and exhibited a marked increase in ERK1/2 (extracellular signal–regulated kinases 1 and 2) pathway signaling and cyclin D1 abundance when assessed in the absence of inhibitor. Genomic sequencing revealed no acquired mutations in MEK1 or MEK2, the primary target of AZD6244. Rather, resistant lines showed a marked up-regulation of their respective driving oncogenes, BRAF600E or KRAS13D, due to intrachromosomal amplification. Inhibition of BRAF reversed resistance to AZD6244 in COLO205 cells, which suggested that combined inhibition of MEK1/2 and BRAF may reduce the likelihood of acquired resistance in tumors with BRAF600E. Knockdown of KRAS reversed AZD6244 resistance in HCT116 cells as well as reduced the activation of ERK1/2 and protein kinase B; however, the combined inhibition of ERK1/2 and phosphatidylinositol 3-kinase signaling had little effect on AZD6244 resistance, suggesting that additional KRAS effector pathways contribute to this process. Microarray analysis identified increased expression of an 18-gene signature previously identified as reflecting MEK1/2 pathway output in resistant cells. Thus, amplification of the driving oncogene (BRAF600E or KRAS13D) can drive acquired resistance to MEK1/2 inhibitors by increasing signaling through the ERK1/2 pathway. However, up-regulation of KRAS13D leads to activation of multiple KRAS effector pathways, underlining the therapeutic challenge posed by KRAS mutations. These results may have implications for the use of combination therapies.
    MeSH term(s) Benzimidazoles ; Cell Cycle/drug effects ; Cell Death/drug effects ; Cell Line, Tumor ; Colorectal Neoplasms/drug therapy ; Colorectal Neoplasms/enzymology ; Colorectal Neoplasms/genetics ; Colorectal Neoplasms/pathology ; Drug Resistance, Neoplasm/genetics ; Gene Amplification ; Genes, ras ; Humans ; MAP Kinase Signaling System/drug effects ; MAP Kinase Signaling System/genetics ; Mitogen-Activated Protein Kinase Kinases/antagonists & inhibitors ; Phosphatidylinositol 3-Kinases/antagonists & inhibitors ; Proto-Oncogene Proteins/genetics ; Proto-Oncogene Proteins B-raf/genetics ; Proto-Oncogene Proteins p21(ras) ; Up-Regulation ; ras Proteins/genetics
    Chemical Substances AZD 6244 ; Benzimidazoles ; KRAS protein, human ; Proto-Oncogene Proteins ; Phosphatidylinositol 3-Kinases (EC 2.7.1.-) ; BRAF protein, human (EC 2.7.11.1) ; Proto-Oncogene Proteins B-raf (EC 2.7.11.1) ; Mitogen-Activated Protein Kinase Kinases (EC 2.7.12.2) ; Proto-Oncogene Proteins p21(ras) (EC 3.6.5.2) ; ras Proteins (EC 3.6.5.2)
    Language English
    Publishing date 2011-06-10
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Corrected and Republished Article
    ZDB-ID 2417226-1
    ISSN 1937-9145 ; 1945-0877
    ISSN (online) 1937-9145
    ISSN 1945-0877
    DOI 10.1126/scisignal.4170er2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Professor J. L. Harley: C.B.E., M.A., D.Phil. (Oxon), Hon. Fil. Dr (Uppsala), Hon. D.Sc. (Sheffield) F.L.S., C.Biol., F.I.Biol., F.R.S. (Editor of The New Phytologist, 1961-1983, Advisor to The New Phytologist Trust 1983-1990).

    Smith, David / Lewis, David

    The New phytologist

    2013  Volume 119, Issue 1, Page(s) 5–7

    Language English
    Publishing date 2013-08-23
    Publishing country England
    Document type Journal Article
    ZDB-ID 208885-x
    ISSN 1469-8137 ; 0028-646X
    ISSN (online) 1469-8137
    ISSN 0028-646X
    DOI 10.1111/j.1469-8137.1991.tb01003.x
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Commentary on "locally advanced prostate cancer: a population-based study of treatment patterns". W.T. Lowrance, E.B. Elkin, D.S. Yee, A. Feifer, B. Ehdaie, L.M. Jacks, C.L. Atoria, M.J. Zelefsky, H.I. Scher, P.T. Scardino, J.A. Eastham, Department of Surgery, Division of Urology, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA: BJU Int. 2012; 109(9):1309-14. doi: 10.1111/j.1464-410X.2011.10760.x. Epub 2011 Nov 15.

    Smith, Joseph A

    Urologic oncology

    2012  Volume 30, Issue 6, Page(s) 961–962

    Language English
    Publishing date 2012-11
    Publishing country United States
    Document type Comment ; Journal Article
    ZDB-ID 1336505-8
    ISSN 1873-2496 ; 1078-1439
    ISSN (online) 1873-2496
    ISSN 1078-1439
    DOI 10.1016/j.urolonc.2012.08.007
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Commentary on "pretreatment expectations of patients undergoing robotic assisted laparoscopic or open retropubic radical prostatectomy". F.R. Schroeck, T.L. Krupski, S.B. Stewart, L.L. Bones, L. Gerber, D.M. Albala, J.W. Moul, Duke Prostate Center, Division of Urology, Department of Surgery, Duke University Medical Center, Durham, NC 27710, USA: J Urol 2012; 187:894-8. Epub 2012, January 15.

    Smith, Joseph A

    Urologic oncology

    2012  Volume 30, Issue 6, Page(s) 962

    Language English
    Publishing date 2012-11
    Publishing country United States
    Document type Comment ; Journal Article
    ZDB-ID 1336505-8
    ISSN 1873-2496 ; 1078-1439
    ISSN (online) 1873-2496
    ISSN 1078-1439
    DOI 10.1016/j.urolonc.2012.08.008
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Book ; Online: Oceanography and Marine Biology

    Hawkins, S. J / Todd, P. A / Russell, B. D / Lemasson, A. J / Allcock, A. L / Byrne, M / Firth, L. B / Lucas, C. H / Marzinelli, E. M / Mumby, P. J / Sharples, J / Smith, I. P / Swearer, S. E / Lemasson, A. J

    An annual review. Volume 61

    2023  

    Keywords Applied ecology ; The Earth: natural history general ; Oceanography (seas) ; Environmental science, engineering & technology ; Climate change ; Marine biology ; oceanography ; marine biology ; marine science ; environmental science ; fisheries ; fish biology ; crustaceans ; climate change
    Language English
    Size 1 electronic resource (376 pages)
    Publisher Taylor and Francis
    Publishing place Boca Raton, Abingdon
    Document type Book ; Online
    Note English
    HBZ-ID HT030612922
    ISBN 9781003363873 ; 1003363873
    Database ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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  6. Article ; Online: The Spongistatins: Architecturally Complex Natural Products-Part Two: Synthesis of the C(29-51) Subunit, Fragment Assembly, and Final Elaboration to (+)-Spongistatin 2 Financial support was provided by the National Institutes of Health (National Cancer Institute) through Grant CA-70329, a NIH Postdoctoral Fellowship to C.S.B., a Japan Society for Promotion of Science Fellowship to N.M., and a Royal Society Fulbright Fellowship to V.A.D. We also thank the Daiichi Pharmaceutical Co., Ltd, and the Tanabe Seiyaku Co., Ltd for financial support. Finally we thank Dr George T. Furst, Dr. Patrick J. Carroll, and Dr. Rakesh Kohli of the University of Pennsylvania Spectroscopic Service Center for assistance in securing and interpreting high-field NMR spectra, X-ray crystal structures, and mass spectra, respectively.

    Smith III, Amos B. / Lin, Qiyan / Doughty, Victoria A. / Zhuang, Linghang / McBriar, Mark D. / Kerns, Jeffrey K. / Brook, Christopher S. / Murase, Noriaki / Nakayama, Kiyoshi

    Angewandte Chemie (International ed. in English)

    2001  Volume 40, Issue 1, Page(s) 196–199

    Language English
    Publishing date 2001-01-05
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 2011836-3
    ISSN 1521-3773 ; 1433-7851
    ISSN (online) 1521-3773
    ISSN 1433-7851
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Book ; Online: Oceanography and Marine Biology : An Annual Review, Volume 59

    Hawkins, S.J. / Lemasson, A. J. / Allcock, A.L. / Bates, A. E. / Byrne, M. / Evans, A J. / Firth, L.B. / Marzinelli, E.M. / Russell, B.D. / Smith, I.P. / Swearer, S.E. / Todd, P.A. / Lemasson, A. J.

    2021  

    Keywords Lifestyle, sport & leisure ; Earth sciences, geography, environment, planning ; Technology, engineering, agriculture ; Mathematics & science ; oceanography, climate change, reefs, marine science, marine conservation, marine research
    Size 1 Online-Ressource
    Publisher Taylor and Francis
    Document type Book ; Online
    Note English ; Open Access
    HBZ-ID HT021290418
    ISBN 9781003138846 ; 1003138845
    Database ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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  8. Book ; Conference proceedings ; Online: Magnetic petrology of ODP Leg 121 holes, supplementary data to: Smith, Guy M; Gee, Jeff S; Klootwijk, Christian T (1991): Magnetic petrology of basalts from Ninetyeast Ridge. In: Weissel, J; Peirce, J; Taylor, E; et al. (eds.), Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 121, 525-545

    Smith, Guy M / Gee, Jeff S / Klootwijk, Christian T

    1991  

    Abstract: Given the importance of the inversion of seamount magnetic anomalies, particularly to the motion of the Pacific plate, it is important to gain a better understanding of the nature of the magnetic source of these features. Although different in detail, ... ...

    Abstract Given the importance of the inversion of seamount magnetic anomalies, particularly to the motion of the Pacific plate, it is important to gain a better understanding of the nature of the magnetic source of these features. Although different in detail, Ninetyeast Ridge is composed of submarine and subaerial igneous rocks that are similar to those found at many seamounts, making it a suitable proxy. We report here on the magnetic petrology of a collection of samples from Ninetyeast Ridge in the Indian Ocean. Our purpose is to determine the relationship between primary petrology, subsequent alteration, and magnetic properties of the recovered rocks. Such information will eventually lead to a more complete understanding of the magnetization of seamounts and presumably improvements in the accuracy of anomaly inversions. Three basement sites were drilled on Ninetyeast Ridge, with recovery of subaerial basalt flows at the first two (Sites 756 and 757) and submarine massive and pillow flows at the final one (Site 758). The three sites were distinctly different. Site 756 was dominated by ilmenite. What titanomagnetite was present had undergone deuteric alteration and secondary hematite was present in many samples. The magnetization was moderate and stable although it yielded a paleolatitude somewhat lower than expected. Site 757 was highly oxidized, presumably while above sea level. It was dominated by primary titanomagnetite, which was deuterically altered. Secondary hematite was common. Magnetization was relatively weak but quite stable. The paleolatitude for all but the lowermost flows was approximately 40? lower than expected. Site 758 was also dominated by primary titanomagnetite. There was relatively little oxidation with most primary titanomagnetite showing no evidence of high-temperature alteration. No secondary hematite was in evidence. This site had the highest magnetization of the three (although somewhat low relative to other seamounts) but was relatively unstable with significant viscous remanence in many samples. Paleolatitude was close to the expected value. It is not possible, at present, to confidently associate these rocks with specific locations in a seamount structure. A possible and highly speculative model would place rocks similar to Site 757 near the top of the edifice, Site 756 lower down but still erupted above sea level, and Site 758 underlying these units, erupted while the seamount was still below sea level.
    Language English
    Dates of publication 1991-9999
    Size Online-Ressource
    Publisher PANGAEA - Data Publisher for Earth & Environmental Science
    Publishing place Bremen/Bremerhaven
    Document type Book ; Conference proceedings ; Online
    Note This dataset is supplement to doi:10.2973/odp.proc.sr.121.154.1991
    DOI 10.1594/PANGAEA.761144
    Database Library catalogue of the German National Library of Science and Technology (TIB), Hannover

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  9. Book ; Conference proceedings ; Online: Magnetostratigraphy of Paleogene and upper Cretaceous sediments from Broken Ridge, supplementary data to: Gee, Jeff S; Klootwijk, Christian T; Smith, Guy M (1991): Magnetostratigraphy of Paleogene and upper Cretaceous sediments from Broken Ridge, eastern Indian Ocean. In: Weissel, J; Peirce, J; Taylor, E; et al. (eds.), Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 121, 359-376

    Gee, Jeff S / Klootwijk, Christian T / Smith, Guy M

    1991  

    Abstract: ... The approximately 1400-m section of prerift sediments on Broken Ridge preserves a polarity sequence that spans ... the middle Eocene to Upper Cretaceous (Chrons C18/C20 to C34), including a 500-m continuous sequence ...

    Abstract Broken Ridge represents a fragment of the oceanic Kerguelen-Heard platform, constructed at high southern latitudes in the middle Cretaceous and rifted apart during the middle Eocene (43-45 Ma). The approximately 1400-m section of prerift sediments on Broken Ridge preserves a polarity sequence that spans the middle Eocene to Upper Cretaceous (Chrons C18/C20 to C34), including a 500-m continuous sequence from the lower Eocene (C23R) to the Maestrichtian/Campanian boundary (C32R). The polarity record, together with biostratigraphic data, provides a well-constrained time framework for interpreting the history of Broken Ridge. Inclinations in the lower portion of the section are generally 5?-10? shallower than the expected geocentric axial dipole inclination. Comparison of inclination and porosity changes with stratigraphic depth suggests the importance of compaction in generating these shallow inclinations. Changes in the magnetic fabric, reflected in the anisotropy of anhysteretic remanence, provide additional support for this interpretation.
    Language English
    Dates of publication 1991-9999
    Size Online-Ressource
    Publisher PANGAEA - Data Publisher for Earth & Environmental Science
    Publishing place Bremen/Bremerhaven
    Document type Book ; Conference proceedings ; Online
    Note This dataset is supplement to doi:10.2973/odp.proc.sr.121.151.1991
    DOI 10.1594/PANGAEA.761119
    Database Library catalogue of the German National Library of Science and Technology (TIB), Hannover

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  10. Book ; Conference proceedings ; Online: Mean inclination results of ODP Leg 121 samples (Table 3), supplementary data to: Klootwijk, Christian T; Gee, Jeff S; Peirce, John W; Smith, Guy M (1991): Constraints on the India-Asia convergence: paleomagnetic results from Ninetyeast Ridge. In: Weissel, J; Peirce, J; Taylor, E; et al. (eds.), Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 121, 777-882

    Klootwijk, Christian T / Gee, Jeff S / Peirce, John W / Smith, Guy M

    1991  

    Abstract: ... 757 indicate paleolatitudes at about 50?S. These support a Kerguelen hot spot origin for Ninetyeast ... 756 indicates a lower paleolatitude (about 43?S), as do parts of the basalt sequence of Site 758 ...

    Abstract This study details the Late Cretaceous and Tertiary northward movement of the Indian plate. Breaks in India's northward movement rate are identified, dated, and correlated with the evolution of the India-Asia convergence. Paleolatitudinal constraints on the origin of Ninetyeast Ridge are discussed, and limited magnetostratigraphic detail is provided.
    Nearly 1500 sediment and basement samples from Sites 756, 757, and 758 on Ninetyeast Ridge were studied through detailed alternating field and thermal demagnetization. Primary and various secondary magnetization components were identified. Breakpoint intervals in the primary paleolatitude pattern for common-Site 758 were identified at 2.7, 6.7,18.5, about 53, 63.5-67, and 68-74.5 Ma. Only the breakpoint interval at about 53 Ma reliably reflects a reduction in India's northward movement rate. The onset of this probably gradual slowdown was dated at 55 Ma (minimal age) based on the intersection of weighted linear regression lines. At the location of common-Site 758, northward movement slowed from 18-19.5 cm/yr (from at least 65 to 55 Ma) to 4.5 cm/yr (from 55 to at least 20 Ma). Reanalysis of earlier DSDP/ODP paleolatitude data from the Indian plate gives a comparable date (53 Ma) for this reduction in northward velocity.
    Comparison of our Ninetyeast Ridge data and Himalayan paleomagnetic data indicates that the initial contact of Greater India and Asia may have already been established by Cretaceous/Tertiary boundary time. The geological record of the convergence zone and the Indian plate supports the notion that the Deccan Traps extrusion may have resulted from the ensuing deformation of the Indian plate. We interpret the breakpoint at 55+ Ma to reflect completion of the eastward progressive India-Asia suturing process.
    Neogene phases in the evolution of the convergence zone were correlated with significant changes in the susceptibility, NRM intensity, and lithostratigraphic profile of Site 758. These changes are interpreted to reflect and postdate tectonic phases in the evolution of the wider Himalayan and southern Tibetan region. The changes were dated and interpreted as follows: 17.5 Ma, initial uplift of the Higher Himalaya following initiation of intercontinental underthrusting; 10-10.4 Ma, increased uplift and onset of Middle Siwaliks sedimentation; 8.8 Ma, probable reduction in influx corresponding with the Nagri Formation to Dhok Pathan Formation changeover; 6.5 Ma, major tectonic phase evident throughout the wider Himalayan region and northern Indian Ocean; 5.1-5.4 Ma, onset of oroclinal bending of the Himalayan Arc, of extensional tectonism in southern Tibet, and of Upper Siwalik sedimentation; 2.5-2.7 and 1.9 Ma, major phases of uplift of the Himalayan and Tibetan region culminating in the present-day high relief.
    The basal ash sequence and upper flow sequence of Site 758 and the basal ash sequence of Site 757 indicate paleolatitudes at about 50?S. These support a Kerguelen hot spot origin for Ninetyeast Ridge. Consistently aberrant inclinations in the basalt sequence of Site 757 may be related to a southward ridge jump at about the time (58 Ma) that these basalts were erupted. The basalt sequence of Site 756 indicates a lower paleolatitude (about 43?S), as do parts of the basalt sequence of Site 758 which also have reversed polarity overprints. The low paleolatitudes for Site 756 may be explained by late-stage volcanism north of the Kerguelen hot spot or the influence of the Amsterdam-St. Paul hot spot.
    Language English
    Dates of publication 1991-9999
    Size Online-Ressource
    Publisher PANGAEA - Data Publisher for Earth & Environmental Science
    Publishing place Bremen/Bremerhaven
    Document type Book ; Conference proceedings ; Online
    Note This dataset is supplement to doi:10.2973/odp.proc.sr.121.121.1991
    DOI 10.1594/PANGAEA.760665
    Database Library catalogue of the German National Library of Science and Technology (TIB), Hannover

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