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  1. Article ; Online: Improving vitrification efficiency of human in vitro matured oocytes by the addition of LEA proteins.

    Li, Lu / Bi, Xingyu / Wu, Xueqing / Chen, Zhongrong / Cao, Yunxia / Zhao, Gang

    Human reproduction (Oxford, England)

    2024  

    Abstract: Study question: Can the addition of late embryogenesis-abundant (LEA) proteins ... potential after fertilization?: Summary answer: LEA proteins improve the developmental potential of human ... subsequent clinical outcomes. Recent studies have shown that LEA proteins possess high hydrophilicity and ...

    Abstract Study question: Can the addition of late embryogenesis-abundant (LEA) proteins as a cryoprotective agent during the vitrification cryopreservation of in vitro matured oocytes enhance their developmental potential after fertilization?
    Summary answer: LEA proteins improve the developmental potential of human in vitro matured oocytes following cryopreservation, mostly by downregulating FOS genes, reducing oxidative stress, and inhibiting the formation of ice crystals.
    What is known already: Various factors in the vitrification process, including cryoprotectant toxicity, osmotic stress, and ice crystal formation during rewarming, can cause fatal damage to oocytes, thereby affecting the oocytes developmental potential and subsequent clinical outcomes. Recent studies have shown that LEA proteins possess high hydrophilicity and inherent stress tolerance, and can reduce low-temperature damage, although the molecular mechanism it exerts protective effects is still unclear.
    Study design, size, duration: Two LEA proteins extracted and purified by us were added to solutions for vitrification-warming of oocytes at concentrations of 10, 100, and 200 µg/mL, to determine the optimal protective concentration for each protein. Individual oocyte samples were collected for transcriptomic analysis, with each group consisting of three sample replicates.
    Participants/materials, setting, methods: Immature oocytes were collected from patients who were undergoing combined in vitro fertilization (IVF) treatment and who had met the designated inclusion and exclusion criteria. These oocytes underwent in vitro maturation (IVM) culture for experimental research. A fluorescence microscope was used to detect the levels of mitochondrial membrane potential (MMP), reactive oxygen species (ROS), and calcium in the mitochondria of vitrified-warmed human oocytes treated with different concentrations of LEA proteins, and the protective effect of the protein on mitochondrial function was assessed. The levels of intracellular ice recrystallization inhibition (IRI) in human oocytes after vitrification-warming were characterized by the cryomicroscope, to determine the LEA proteins inhibitory effect on recrystallization. By analyzing transcriptome sequencing data to investigate the potential mechanism through which LEA proteins exert their cryoprotective effects.
    Main results and the role of chance: The secondary structures of AfrLEA2 and AfrLEA3m proteins were shown to consist of a large number of α-helices and the proteins were shown to be highly hydrophilic, in agreement with previous reports. Confocal microscopy results showed that the immunofluorescence of AfrLEA2-FITC and AfrLEA3m-FITC-labeled proteins appeared to be extracellular and did not penetrate the cell membrane compared with the fluorescein isothiocyanate (FITC) control group, indicating that both AfrLEA2 and AfrLEA3m proteins were extracellular. The group treated with 100 µg/mL AfrLEA2 or AfrLEA3m protein had more uniform cytoplasmic particles and fewer vacuoles compared to the 10 and 200 µg/mL groups and were closest to the fresh group. In the 100 µg/mL groups, MMPs were significantly higher while ROS and calcium levels were significantly lower than those in the control group and were closer to the levels observed in fresh oocytes. Meanwhile, 100 µg/mL of AfrLEA2 or AfrLEA3m protein caused smaller ice crystal formation in the IRI assay compared to the control group treated with dimethylsulphoxide (DMSO) and ethylene glycol (EG); thus, the recrystallization inhibition was superior to that with the conventional cryoprotectants DMSO and EG. Further results revealed that the proteins improved the developmental potential of human oocytes following cryopreservation, likely by downregulating FOS genes and reducing oxidative stress.
    Limitations, reasons for caution: The in vitro-matured metaphase II (IVM-MII) oocytes used in the study, due to ethical constraints, may not accurately reflect the condition of MII oocytes in general. The AfrLEA2 and AfrLEA3m proteins are recombinant proteins and their synthetic stability needs to be further explored.
    Wider implications of the findings: LEA proteins, as a non-toxic and effective cryoprotectant, can reduce the cryoinjury of oocytes during cryopreservation. It provides a new promising method for cryopreservation of various cell types.
    Study funding/competing interest(s): This work was supported by the National Key Research and Development Program of China (2022YFC2703000) and the National Natural Science Foundation of China (52206064). The authors declare no competing interest.
    Trial registration number: N/A.
    Language English
    Publishing date 2024-04-09
    Publishing country England
    Document type Journal Article
    ZDB-ID 632776-x
    ISSN 1460-2350 ; 0268-1161 ; 1477-741X
    ISSN (online) 1460-2350
    ISSN 0268-1161 ; 1477-741X
    DOI 10.1093/humrep/deae065
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: The Group 3 LEA proteins of Artemia franciscana for cryopreservation.

    Li, Lu / Zhou, Xuexun / Chen, Zhongrong / Cao, Yunxia / Zhao, Gang

    Cryobiology

    2022  Volume 106, Page(s) 1–12

    Abstract: Late embryogenesis-abundant (LEA) proteins are protective proteins that are enriched in the late ... stage of seed embryo development. LEA proteins play an important role in resisting abiotic stresses ... such as low temperature and drought. Artemia franciscana is the only animal known to express three different groups of LEA ...

    Abstract Late embryogenesis-abundant (LEA) proteins are protective proteins that are enriched in the late stage of seed embryo development. LEA proteins play an important role in resisting abiotic stresses such as low temperature and drought. Artemia franciscana is the only animal known to express three different groups of LEA proteins in its life cycle, and the discovery has some applications for the cryopreservation of human cells. In this review, A. franciscana LEA proteins from Group 3 are systematically introduced, and the structure, location, function and application in cryopreservation are highlighted. As a nontoxic and effective cryoprotectant, A. franciscana LEA proteins are expected to provide a new method for cryopreservation of cells.
    MeSH term(s) Animals ; Artemia/metabolism ; Cryopreservation/methods ; Cryoprotective Agents/metabolism ; Cryoprotective Agents/pharmacology ; Embryonic Development ; Plant Proteins/metabolism ; Proteins/metabolism
    Chemical Substances Cryoprotective Agents ; Plant Proteins ; Proteins
    Language English
    Publishing date 2022-02-04
    Publishing country Netherlands
    Document type Journal Article ; Review ; Research Support, Non-U.S. Gov't
    ZDB-ID 80098-3
    ISSN 1090-2392 ; 0011-2240
    ISSN (online) 1090-2392
    ISSN 0011-2240
    DOI 10.1016/j.cryobiol.2022.01.004
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Late embryogenesis abundant (LEA) gene family in

    Chen, Juan / Li, Na / Wang, Xiaoyu / Meng, Xue / Cui, Xiaomin / Chen, Zhiyong / Ren, Hui / Ma, Jing / Liu, Hao

    Plant signaling & behavior

    2021  Volume 16, Issue 5, Page(s) 1891769

    Abstract: Late embryogenesis abundant (LEA) proteins play important roles in plant defense response ...

    Abstract Late embryogenesis abundant (LEA) proteins play important roles in plant defense response to drought stress. However, genome-wide identification of the
    MeSH term(s) Droughts ; Gene Expression Profiling ; Gene Expression Regulation, Plant ; Multigene Family ; Phylogeny ; Plant Proteins/chemistry ; Plant Proteins/genetics ; Plant Proteins/metabolism ; Promoter Regions, Genetic/genetics ; Protein Domains ; Salvia miltiorrhiza/genetics ; Salvia miltiorrhiza/physiology ; Stress, Physiological/genetics
    Chemical Substances Plant Proteins ; late embryogenesis abundant protein, plant
    Language English
    Publishing date 2021-04-05
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ISSN 1559-2324
    ISSN (online) 1559-2324
    DOI 10.1080/15592324.2021.1891769
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: The Group 3 LEA protein of Artemia franciscana for cryopreservation

    Li, Lu / Zhou, Xuexun / Chen, Zhongrong / Cao, Yunxia / Zhao, Gang

    Cryobiology. 2022 Jan. 25,

    2022  

    Abstract: Late embryogenesis-abundant (LEA) proteins are dehydrating protective proteins that are enriched ... in the late stage of seed embryo development and have osmotic adjustment. LEA proteins play an important role ... to express three different groups of LEA proteins in its anhydrous life stage, and the discovery has ...

    Abstract Late embryogenesis-abundant (LEA) proteins are dehydrating protective proteins that are enriched in the late stage of seed embryo development and have osmotic adjustment. LEA proteins play an important role in resisting abiotic stresses such as low temperature and drought. Artemia franciscana is the only animal known to express three different groups of LEA proteins in its anhydrous life stage, and the discovery has some inspirations for the cryopreservation of human cells. In this review, A. franciscana LEA proteins are systematically introduced, and the structure, location, function and application in cryopreservation of Group 3 LEA proteins with different functions and their research progress are highlighted. As a nontoxic and effective cryoprotectant, A. franciscana LEA proteins are expected to provide a new method for cryopreservation of cells through systematic review and analysis.
    Keywords Artemia franciscana ; cryobiology ; cryopreservation ; cryoprotectants ; drought ; embryogenesis ; humans ; systematic review ; temperature
    Language English
    Dates of publication 2022-0125
    Publishing place Elsevier Inc.
    Document type Article
    Note Pre-press version
    ZDB-ID 80098-3
    ISSN 1090-2392 ; 0011-2240
    ISSN (online) 1090-2392
    ISSN 0011-2240
    DOI 10.1016/j.cryobiol.2022.01.004
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  5. Article ; Online: Genome-wide identification and characterization of members of the LEA gene family in Panax notoginseng and their transcriptional responses to dehydration of recalcitrant seeds.

    Jia, Jin-Shan / Ge, Na / Wang, Qing-Yan / Zhao, Li-Ting / Chen, Cui / Chen, Jun-Wen

    BMC genomics

    2023  Volume 24, Issue 1, Page(s) 126

    Abstract: Background: Late embryogenesis abundant (LEA) proteins play an important role in dehydration ... about the role of LEA proteins in response to dehydration stress in P. notoginseng seeds. We will perform ... a genome-wide analysis of the LEA gene family and their transcriptional responses to dehydration stress ...

    Abstract Background: Late embryogenesis abundant (LEA) proteins play an important role in dehydration process of seed maturation. The seeds of Panax notoginseng (Burkill) F. H. Chen are typically characterized with the recalcitrance and are highly sensitive to dehydration. However, it is not very well known about the role of LEA proteins in response to dehydration stress in P. notoginseng seeds. We will perform a genome-wide analysis of the LEA gene family and their transcriptional responses to dehydration stress in recalcitrant P. notoginseng seeds.
    Results: In this study, 61 LEA genes were identified from the P. notoginseng genome, and they were renamed as PnoLEA. The PnoLEA genes were classified into seven subfamilies based on the phylogenetic relationships, gene structure and conserved domains. The PnoLEA genes family showed relatively few introns and was highly conserved. Unexpectedly, the LEA_6 subfamily was not found, and the LEA_2 subfamily contained 46 (75.4%) members. Within 19 pairs of fragment duplication events, among them 17 pairs were LEA_2 subfamily. In addition, the expression of the PnoLEA genes was obviously induced under dehydration stress, but the germination rate of P. notoginseng seeds decreased as the dehydration time prolonged.
    Conclusions: We found that the lack of the LEA_6 subfamily, the expansion of the LEA_2 subfamily and low transcriptional levels of most PnoLEA genes might be implicated in the recalcitrant formation of P. notoginseng seeds. LEA proteins are essential in the response to dehydration stress in recalcitrant seeds, but the protective effect of LEA protein is not efficient. These results could improve our understanding of the function of LEA proteins in the response of dehydration stress and their contributions to the formation of seed recalcitrance.
    MeSH term(s) Panax notoginseng/genetics ; Panax notoginseng/metabolism ; Dehydration/genetics ; Plant Proteins/genetics ; Plant Proteins/metabolism ; Phylogeny ; Seeds/metabolism ; Embryonic Development ; Gene Expression Regulation, Plant
    Chemical Substances Plant Proteins
    Language English
    Publishing date 2023-03-17
    Publishing country England
    Document type Journal Article
    ZDB-ID 2041499-7
    ISSN 1471-2164 ; 1471-2164
    ISSN (online) 1471-2164
    ISSN 1471-2164
    DOI 10.1186/s12864-023-09229-0
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Genome-wide study and functional characterization elucidates the potential association of late embryogenesis abundant (LEA) genes with lotus seed development.

    Chen, Lin / Xin, Jia / Song, Heyun / Xu, Fei / Yang, Hui / Sun, Heng / Yang, Mei

    International journal of biological macromolecules

    2022  Volume 226, Page(s) 1–13

    Abstract: Late embryogenesis abundant (LEA) proteins are extremely hydrophilic proteins imperatively ... However, the genome-wide characterization of LEA gene family remains limited, especially in aquatic species ... such as lotus (Nelumbo spp.). Here, 57 putative LEA genes, including 28 NnLEAs and 29 NlLEAs were identified ...

    Abstract Late embryogenesis abundant (LEA) proteins are extremely hydrophilic proteins imperatively associated with plant growth and development, as well as cell protection from abiotic stress. However, the genome-wide characterization of LEA gene family remains limited, especially in aquatic species such as lotus (Nelumbo spp.). Here, 57 putative LEA genes, including 28 NnLEAs and 29 NlLEAs were identified in the N.nucifera and N.lutea genomes, respectively. A total of 27 homologous LEA gene pairs were identified, indicating high degree of sequence homologies between the two Nelumbo species. Secondary structure prediction indicated high prevalence of alpha (α) helix structure among LEA proteins in the LEA_1, LEA_4, and SMP groups. Screening of putative promoter cis-elements revealed that NnLEA genes were involved in diverse biological processes. Most NnLEA genes were predominantly expressed in the late cotyledons and plumules development stages, suggesting their potential vital roles in lotus seed maturation. In addition, genes co-expressed with NnLEAs were involved in ABA signaling, seed maturation, and development processes. Overall, this study provides new insights for the in-depth understanding of the functions of NnLEA proteins in lotus seed development, and could act as a useful reference for the molecular breeding of seeds with prolonged lifespan.
    Language English
    Publishing date 2022-12-06
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 282732-3
    ISSN 1879-0003 ; 0141-8130
    ISSN (online) 1879-0003
    ISSN 0141-8130
    DOI 10.1016/j.ijbiomac.2022.11.301
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  7. Article ; Online: Identification of LEA, a podocalyxin-like glycoprotein, as a predictor for the progression of colorectal cancer.

    Yuan, Dezheng / Chen, Hang / Wang, Shuo / Liu, Furong / Cheng, Yajie / Fang, Jin

    Cancer medicine

    2018  Volume 7, Issue 10, Page(s) 5155–5166

    Abstract: Large external antigen (LEA) is considered as a colorectal cancer (CRC)-associated antigen ... To facilitate the clinical application of LEA, we identified LEA as a podocalyxin-like protein 1 (PODXL ... mass spectrometry in combination, and verified that ND-1-recognized epitope is on the terminal sialic acid of LEA ...

    Abstract Large external antigen (LEA) is considered as a colorectal cancer (CRC)-associated antigen, which was found via mAb ND-1 generated using hybridoma technology, but its molecular features remain unknown. To facilitate the clinical application of LEA, we identified LEA as a podocalyxin-like protein 1 (PODXL) with molecular weight of approximately 230 kDa, a hyperglycosylated protein, using immunoprecipitation and mass spectrometry in combination, and verified that ND-1-recognized epitope is on the terminal sialic acid of LEA. Correlation analysis between LEA and PODXL in molecular weight, immunological cross-reactivity, and gene expression dependence supported the PODXL identity of the LEA. Moreover, we assessed the clinical significance of the LEA in 89 pairs of primary CRC tissues and adjacent nontumor colorectal tissues using ND-1 by quantum dot-based immunohistochemistry (QD-IHC). High LEA expression was correlated significantly with T stage (P = 0.010). Patients with high LEA expression showed significantly poorer prognosis than those with LEA low expression (P = 0.007). Multivariate analysis indicated LEA expression as an independent predictor. Furthermore, the comparative analysis showed that mAb ND-1-based IHC analysis toward sugar residue of PODXL has higher sensitivity and specificity to evaluate the LEA/PODXL expression than mAb 3D3-based method toward core protein of PODXL in CRC cell lines and clinical samples. In addition, we first found that LEA/PODXL can be secreted in exosomes from cancer cells and CRC patient peripheral blood. Our results demonstrate that LEA is an independent predictor for CRC progression and has the potential to be applied for clinical setting with high sensitivity, high specificity, and noninvasive access.
    MeSH term(s) Biomarkers, Tumor/genetics ; Biomarkers, Tumor/metabolism ; Cell Line, Tumor ; Colorectal Neoplasms/genetics ; Colorectal Neoplasms/metabolism ; Colorectal Neoplasms/pathology ; Disease Progression ; Exosomes/metabolism ; Female ; Gene Expression Regulation, Neoplastic ; HT29 Cells ; Humans ; Male ; Molecular Weight ; Neoplasm Staging ; Prognosis ; Sialoglycoproteins/genetics ; Sialoglycoproteins/metabolism ; Up-Regulation
    Chemical Substances Biomarkers, Tumor ; Sialoglycoproteins ; podocalyxin
    Language English
    Publishing date 2018-09-12
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ISSN 2045-7634
    ISSN (online) 2045-7634
    DOI 10.1002/cam4.1765
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  8. Article ; Online: Genome-wide identification and expression analyses of late embryogenesis abundant (LEA) gene family in tobacco (Nicotiana tabacum L.) reveal their function in abiotic stress responses.

    Geng, Weibo / Wang, Yanan / Zhang, Jing / Liu, Zhonghui / Chen, Xingyun / Qin, Liting / Yang, Long / Tang, Heng

    Gene

    2022  Volume 836, Page(s) 146665

    Abstract: Late embryogenesis abundant (LEA) proteins play an important role in plant growth and response ... to abiotic stresses. However the late embryogenesis abundant (LEA) gene family in Nicotiana tabacum has not been ... including LEA_1, LEA_2, LEA_3, LEA_4, LEA_5, LEA_6, DHN (dehydratin) and SMP (Seed Maturation Protein ...

    Abstract Late embryogenesis abundant (LEA) proteins play an important role in plant growth and response to abiotic stresses. However the late embryogenesis abundant (LEA) gene family in Nicotiana tabacum has not been systematically studied. In this study, 123 NtLEA genes were identified in Nicotiana tabacum, and divided into 8 groups, including LEA_1, LEA_2, LEA_3, LEA_4, LEA_5, LEA_6, DHN (dehydratin) and SMP (Seed Maturation Protein). The LEA_2 group is the most abundant of the NtLEA family. The gene structure, conserved motifs, subcellular localization and physicochemical properties of the NtLEA genes were analyzed. RNA-seq and qPCR analyses showed that the NtLEA genes were significantly induced under two different abiotic stresses and showed different expression patterns. The expression patterns of 35 NtLEA genes responding to ABA and 3 NtLEA genes responding to NaCl abiotic stress, respectively, were characterized. The protein-protein interaction network revealed that most NtLEA proteins (>78%) had the potential function to enhance tobacco resistance to abiotic stress. The transcriptional regulatory network showed that 21 transcription factor families were involved in regulating the expression of the NtLEA genes. These results are beneficial for future studies of the function of the NtLEA genes.
    MeSH term(s) Embryonic Development ; Gene Expression Regulation, Plant ; Phylogeny ; Plant Proteins/metabolism ; Stress, Physiological/genetics ; Nicotiana/genetics ; Nicotiana/metabolism
    Chemical Substances Plant Proteins
    Language English
    Publishing date 2022-06-09
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 391792-7
    ISSN 1879-0038 ; 0378-1119
    ISSN (online) 1879-0038
    ISSN 0378-1119
    DOI 10.1016/j.gene.2022.146665
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  9. Article: The Role of the Late Embryogenesis-Abundant (LEA) Protein Family in Development and the Abiotic Stress Response: A Comprehensive Expression Analysis of Potato (

    Chen, Yongkun / Li, Canhui / Zhang, Bo / Yi, Jing / Yang, Yu / Kong, Chunyan / Lei, Chunxia / Gong, Ming

    Genes

    2019  Volume 10, Issue 2

    Abstract: Late embryogenesis-abundant (LEA) proteins are a large and highly diverse family believed ...

    Abstract Late embryogenesis-abundant (LEA) proteins are a large and highly diverse family believed to function in normal plant growth and development, and in protecting cells from abiotic stress. This study presents a characterisation of 74
    MeSH term(s) Chromosome Mapping ; Droughts ; Gene Expression Regulation, Plant/genetics ; Multigene Family/genetics ; Phylogeny ; Plant Proteins/classification ; Plant Proteins/genetics ; Seeds/genetics ; Seeds/growth & development ; Solanum tuberosum/genetics ; Solanum tuberosum/growth & development ; Stress, Physiological/genetics
    Chemical Substances Plant Proteins
    Language English
    Publishing date 2019-02-15
    Publishing country Switzerland
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2527218-4
    ISSN 2073-4425
    ISSN 2073-4425
    DOI 10.3390/genes10020148
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article: Genome-wide identification and expression analyses of late embryogenesis abundant (LEA) gene family in tobacco (Nicotiana tabacum L.) reveal their function in abiotic stress responses

    Geng, Weibo / Wang, Yanan / Zhang, Jing / Liu, Zhonghui / Chen, Xingyun / Qin, Liting / Yang, Long / Tang, Heng

    Gene. 2022 Aug. 20, v. 836

    2022  

    Abstract: Late embryogenesis abundant (LEA) proteins play an important role in plant growth and response ... to abiotic stresses. However the late embryogenesis abundant (LEA) gene family in Nicotiana tabacum has not been ... including LEA_1, LEA_2, LEA_3, LEA_4, LEA_5, LEA_6, DHN (dehydratin) and SMP (Seed Maturation Protein ...

    Abstract Late embryogenesis abundant (LEA) proteins play an important role in plant growth and response to abiotic stresses. However the late embryogenesis abundant (LEA) gene family in Nicotiana tabacum has not been systematically studied. In this study, 123 NtLEA genes were identified in Nicotiana tabacum, and divided into 8 groups, including LEA_1, LEA_2, LEA_3, LEA_4, LEA_5, LEA_6, DHN (dehydratin) and SMP (Seed Maturation Protein). The LEA_2 group is the most abundant of the NtLEA family. The gene structure, conserved motifs, subcellular localization and physicochemical properties of the NtLEA genes were analyzed. RNA-seq and qPCR analyses showed that the NtLEA genes were significantly induced under two different abiotic stresses and showed different expression patterns. The expression patterns of 35 NtLEA genes responding to ABA and 3 NtLEA genes responding to NaCl abiotic stress, respectively, were characterized. The protein–protein interaction network revealed that most NtLEA proteins (>78%) had the potential function to enhance tobacco resistance to abiotic stress. The transcriptional regulatory network showed that 21 transcription factor families were involved in regulating the expression of the NtLEA genes. These results are beneficial for future studies of the function of the NtLEA genes.
    Keywords Nicotiana tabacum ; abiotic stress ; embryogenesis ; genes ; plant growth ; protein-protein interactions ; seed maturation ; sequence analysis ; tobacco ; transcription (genetics) ; transcription factors
    Language English
    Dates of publication 2022-0820
    Publishing place Elsevier B.V.
    Document type Article
    ZDB-ID 391792-7
    ISSN 1879-0038 ; 0378-1119
    ISSN (online) 1879-0038
    ISSN 0378-1119
    DOI 10.1016/j.gene.2022.146665
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