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  1. Article: A Turner syndrome case associated with dic(Y;22).

    Kawamura, Rie / Inagaki, Hidehito / Yamada, Midori / Suzuki, Fumihiko / Naru, Yuki / Kurahashi, Hiroki

    Molecular cytogenetics

    2021  Volume 14, Issue 1, Page(s) 34

    Abstract: ... Y;22)(p11.3;p11.2)[28]/45,X[2].ish dic(Y;22)(SRY+,DYZ1+). A possible mechanism underlying ... this mosaicism was a loss of dic(Y;22) followed by a monosomy rescue of chromosome 22. However, SNP ... suggest that the separation of the dicentric chromosome at the junction resulted in a loss of chromosome Y ...

    Abstract Background: Constitutional telomeric associations are very rare events and the mechanism underlying their development is not well understood.
    Case presentation: We here describe a female case of Turner syndrome with a 45,X,add(22)(p11.2)[25]/45,X[5]. We reconfirmed this karyotype by FISH analysis as 45,X,dic(Y;22)(p11.3;p11.2)[28]/45,X[2].ish dic(Y;22)(SRY+,DYZ1+). A possible mechanism underlying this mosaicism was a loss of dic(Y;22) followed by a monosomy rescue of chromosome 22. However, SNP microarray analysis revealed no loss of heterozygosity (LOH) in chromosome 22, although a mosaic pattern of LOH was clearly detectable at the pseudoautosomal regions of the sex chromosomes.
    Conclusions: Our results suggest that the separation of the dicentric chromosome at the junction resulted in a loss of chromosome Y without a loss of chromosome 22, leading to this patient's unique mosaicism. Although telomere signals were not detected by FISH at the junction, it is likely that the original dic(Y;22) chromosome was generated by unstable telomeric associations. We propose a novel "pulled apart" mechanism as the process underlying this mosaicism.
    Language English
    Publishing date 2021-07-08
    Publishing country England
    Document type Journal Article
    ZDB-ID 2420849-8
    ISSN 1755-8166
    ISSN 1755-8166
    DOI 10.1186/s13039-021-00556-z
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: First-principles investigation on the segregation of Pd at LaFe1-xPdxO3-y surfaces.

    Tian, Zhi-Xue / Uozumi, Akifumi / Hamada, Ikutaro / Yanagisawa, Susumu / Kizaki, Hidetoshi / Inagaki, Kouji / Morikawa, Yoshitada

    Nanoscale research letters

    2013  Volume 8, Issue 1, Page(s) 203

    Abstract: ... to segregate by taking the aggregation of Pd at LaFe1-xPdxO3-y surfaces into consideration, resulting in a pair ... surfaces would be stable at high temperatures by comparing the stability of LaFe1-xPdxO3-y surfaces ...

    Abstract First-principles calculations were performed to investigate the effect of Pd concentration and oxygen vacancies on the stability of Pd at LaFeO3 surfaces. We found a much stronger tendency of Pd to segregate by taking the aggregation of Pd at LaFe1-xPdxO3-y surfaces into consideration, resulting in a pair of Pd-Pd around a vacancy. Moreover, we predicted that one oxygen-vacancy-containing FeO2-terminated surfaces would be stable at high temperatures by comparing the stability of LaFe1-xPdxO3-y surfaces, which further supports our previous conclusion that a Pd-containing perovskite catalyst should be calcined at 1,073 K or higher temperatures in air to enhance the segregation of Pd in the vicinity of surfaces to rapidly transform the Pd catalyst from oxidized to reduced states on the perovskite support.
    Language English
    Publishing date 2013-05-01
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2253244-4
    ISSN 1556-276X ; 1931-7573
    ISSN (online) 1556-276X
    ISSN 1931-7573
    DOI 10.1186/1556-276X-8-203
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Factors Other Than Low-Dose Computed Tomography Screening Related to Stage Shift and Improved Survival of Lung Cancer.

    Inagaki, Yuji

    Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer

    2023  Volume 18, Issue 5, Page(s) e48–e49

    MeSH term(s) Humans ; Lung Neoplasms ; Early Detection of Cancer ; Tomography, X-Ray Computed/methods ; Mass Screening/methods
    Language English
    Publishing date 2023-04-21
    Publishing country United States
    Document type Letter
    ZDB-ID 2432037-7
    ISSN 1556-1380 ; 1556-0864
    ISSN (online) 1556-1380
    ISSN 1556-0864
    DOI 10.1016/j.jtho.2023.01.082
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  4. Article ; Online: Photochromic organometallics with a dithienylethene (DTE) Bridge, [Y-C[triple bond]C-DTE-C[triple bond]C-Y] (Y={MCp*(dppe)}): photoswitchable molecular wire (M=Fe) versus dual photo- and electrochromism (M=Ru).

    Tanaka, Yuya / Ishisaka, Takuya / Inagaki, Akiko / Koike, Takashi / Lapinte, Claude / Akita, Munetaka

    Chemistry (Weinheim an der Bergstrasse, Germany)

    2010  Volume 16, Issue 16, Page(s) 4762–4776

    Abstract: Dinuclear acetylide-type complexes bridged by a photochromic dithienylethene unit (DTE), [Y-C ... triple bond]C-DTE-C[triple bond]C-Y] 1 (Y={MCp*(dppe)}; Cp*=pentamethylcyclopentadienyl, M=Fe (1(Fe)), Ru ...

    Abstract Dinuclear acetylide-type complexes bridged by a photochromic dithienylethene unit (DTE), [Y-C[triple bond]C-DTE-C[triple bond]C-Y] 1 (Y={MCp*(dppe)}; Cp*=pentamethylcyclopentadienyl, M=Fe (1(Fe)), Ru (1(Ru))), have been prepared, and their wirelike and switching behavior, as well as their oxidation chemistry has been investigated. The DTE complexes 1 exhibit photochromic behavior in a manner similar to organic DTE derivatives; UV irradiation causes ring closure of the open isomer 1O to form the closed isomer 1C and visible-light irradiation of the resultant 1C causes reverse ring opening to regenerate 1O. But the performance is dependent on the metals. With respect to the interconversion rates and the 1C content at the photostationary state under UV irradiation, the ruthenium complex 1(Ru) is superior to the iron analogue 1(Fe). The wirelike performance is associated with the photochromic processes, and the efficient switching performance has been verified for 1(Fe) as characterized by the V(ab) values [V(ab) is the electronic coupling derived from intervalence charge-transfer (IVCT) bands: V(ab)(1(Fe)C; ON)=0.047 eV versus V(ab)(1(Fe)O; OFF)=0 eV], and are also supported by the large switching factor (SF=K(C)(C; ON)/K(C)(O; OFF)=39; K(C)=comproportionation constant). SF for 1(Ru) is determined to be 4.2. The remarkable switching behavior arises from the different pi-conjugated systems in the two isomeric forms, that is, cross-conjugated (1O) and fully conjugated pi-systems (1C). It was also found that, in contrast to the reversible redox behavior of the iron complex 1(Fe), the ruthenium complex 1(Ru)O undergoes oxidative ring closure to form the dicationic species of the closed isomer 1(Ru)C(2+) and, thus, the ruthenium system 1(Ru) shows dual photo- and electrochromism. The distinct oxidation behavior of 1(Fe) and 1(Ru) can be ascribed to the spin distribution on the diradical intermediates 1(Fe)O(2+) and 1(Ru)O(2+), as supported by DFT calculations.
    Language English
    Publishing date 2010-04-26
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 1478547-x
    ISSN 1521-3765 ; 0947-6539
    ISSN (online) 1521-3765
    ISSN 0947-6539
    DOI 10.1002/chem.200903583
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: Typing of Y chromosome single nucleotide polymorphisms in a Japanese population by a multiplexed single nucleotide primer extension reaction.

    Inagaki, Sachiyo / Yamamoto, Yuji / Doi, Yusuke / Takata, Tomoyo / Ishikawa, Takaki / Yoshitome, Kei / Miyaishi, Satoru / Ishizu, Hideo

    Legal medicine (Tokyo, Japan)

    2003  Volume 4, Issue 3, Page(s) 202–206

    Abstract: We have developed a new method for typing single nucleotide polymorphisms (SNPs) on the human Y ... that several SNPs are typed rapidly and simultaneously. We examined 15 different SNP loci on Y chromosome, M9, M105 ...

    Abstract We have developed a new method for typing single nucleotide polymorphisms (SNPs) on the human Y chromosome based on a multiplexed single nucleotide primer extension. This method has the advantage that several SNPs are typed rapidly and simultaneously. We examined 15 different SNP loci on Y chromosome, M9, M105, M122, M125, M128, M130, SRY465, IMS-JST006241, IMS-JST006841, IMS-JST002611, IMS-JST003305, IMS-JST008425, IMS-JST021354, IMS-JST021355 and IMS-JST055457, in 159 Japanese males. From the typing results of these 15 loci, we found 13 haplotypes. Gene diversity for each locus ranged from 0.025 to 0.486 and the haplotype diversity was estimated to be 0.838. This method could be readily applied for personal identification and paternity testing.
    Language English
    Publishing date 2003-07-01
    Publishing country Ireland
    Document type Journal Article
    ZDB-ID 2019555-2
    ISSN 1344-6223
    ISSN 1344-6223
    DOI 10.1016/s1344-6223(02)00032-9
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Rapid daily expansion of highly mobile intracardiac calcified tissue: a case report.

    Sudo, Yuta / Inagaki, Hiroshi

    European heart journal. Case reports

    2023  Volume 7, Issue 6, Page(s) ytad265

    Abstract: Background: A calcified amorphous tumour (CAT) is a non-neoplastic mass lesion arising within the cardiac chamber. CATs are rare but are a common cause of organ embolism. In the present study, we experienced a case of an intracardiac mass with ... ...

    Abstract Background: A calcified amorphous tumour (CAT) is a non-neoplastic mass lesion arising within the cardiac chamber. CATs are rare but are a common cause of organ embolism. In the present study, we experienced a case of an intracardiac mass with calcification that, in contrast to a typical CAT, suddenly appeared and rapidly expanded without an inflammatory response based on pathological findings.
    Case summary: A 58-year-old Japanese man undergoing peritoneal haemodialysis had a high-echoic mobile mass (15 × 6 mm), which was not visible on the transthoracic echocardiography (TTE) approximately a month earlier, in the left ventricular outflow tract noted on TTE performed during a close examination for fever. Although multiple blood cultures were negative, ampicillin/sulbactam and ceftriaxone were initially administered because of suspected blood culture-negative endocarditis. The mass rapidly enlarged (22 × 5 mm) over the following days. A CAT was suspected and resected based on imaging findings with calcification; however, the pathological findings did not indicate inflammation and fibrin that are typically found in CATs. Echocardiography performed 12 months after the resection showed no recurrence.
    Discussion: This intracardiac calcified tissue had several similar features to a CAT. However, the initial presentation, enlargement rate, and pathological features of the tissue differed from that of a typical CAT. Although it is unknown whether this mass is a subtype of CAT, when an intracardiac calcified tissue is detected using an imaging test, careful follow-up or early surgical resection should be considered given the possibility of rapid tissue enlargement and embolism caused by the mass.
    Language English
    Publishing date 2023-05-31
    Publishing country England
    Document type Case Reports
    ISSN 2514-2119
    ISSN (online) 2514-2119
    DOI 10.1093/ehjcr/ytad265
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Gleaning Euglenozoa-specific DNA polymerases in public single-cell transcriptome data.

    Harada, Ryo / Inagaki, Yuji

    Protist

    2023  Volume 174, Issue 6, Page(s) 125997

    Abstract: Multiple genes encoding family A DNA polymerases (famA DNAPs), which are evolutionary relatives of DNA polymerase I (PolI) in bacteria and phages, have been found in eukaryotic genomes, and many of these proteins are used mainly in organelles. Among ... ...

    Abstract Multiple genes encoding family A DNA polymerases (famA DNAPs), which are evolutionary relatives of DNA polymerase I (PolI) in bacteria and phages, have been found in eukaryotic genomes, and many of these proteins are used mainly in organelles. Among members of the phylum Euglenozoa, distinct types of famA DNAP, PolIA, PolIBCD+, POP, and eugPolA, have been found. It is intriguing how the suite of famA DNAPs had been established during the evolution of Euglenozoa, but the DNAP data have not been sampled from the taxa that sufficiently represent the diversity of this phylum. In particular, little sequence data were available for basal branching species in Euglenozoa until recently. Thanks to the single-cell transcriptome data from symbiontids and phagotrophic euglenids, we have an opportunity to cover the "hole" in the repertory of famA DNAPs in the deep branches in Euglenozoa. The current study identified 16 new famA DNAP sequences in the transcriptome data from 33 phagotrophic euglenids and two symbiontids, respectively. Based on the new famA DNAP sequences, the updated diversity and evolution of famA DNAPs in Euglenozoa are discussed.
    MeSH term(s) Euglenozoa ; Transcriptome ; DNA-Directed DNA Polymerase/genetics ; DNA-Directed DNA Polymerase/metabolism ; Euglenida
    Chemical Substances dinitroaminophenol (J04VBD97F1) ; DNA-Directed DNA Polymerase (EC 2.7.7.7)
    Language English
    Publishing date 2023-11-25
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 2036014-9
    ISSN 1618-0941 ; 1434-4610
    ISSN (online) 1618-0941
    ISSN 1434-4610
    DOI 10.1016/j.protis.2023.125997
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  8. Article ; Online: Template Synthesis of Disilacycloalkanes Utilizing the Reactivity of a Siloxane Bond.

    Tu, Yuyang / Inagaki, Yusuke / Setaka, Wataru

    The Journal of organic chemistry

    2024  Volume 89, Issue 9, Page(s) 6222–6229

    Abstract: The investigation of large and flexible macrocyclic compounds has garnered significant attention due to their functions as host molecules and linkers. Although the synthetic yields of such compounds, achieved by linking two molecular fragments, are often ...

    Abstract The investigation of large and flexible macrocyclic compounds has garnered significant attention due to their functions as host molecules and linkers. Although the synthetic yields of such compounds, achieved by linking two molecular fragments, are often hindered by the flexibility of the molecular skeleton, one of the effective solutions is template synthesis for the macrocycles. In this study, a novel template synthesis for disilacycloalkanes by leveraging the reactivity of a siloxane bond was investigated. The yields obtained through the template methods surpassed those of the nontemplate approach, and the introduction of substituents to the silicon atoms was also accomplished with success. All of the resulting disilacycloalkanes crystallized exceptionally well, enabling their structural determination through X-ray crystallography. Notably, the stability of these structures was elucidated by analyzing dispersion forces between alkyl chains, using density functional theory (DFT) calculations. This template synthesis method demonstrates its efficacy in synthesizing molecular systems that encompass two functional moieties linked with macroalkanes.
    Language English
    Publishing date 2024-04-15
    Publishing country United States
    Document type Journal Article
    ZDB-ID 123490-0
    ISSN 1520-6904 ; 0022-3263
    ISSN (online) 1520-6904
    ISSN 0022-3263
    DOI 10.1021/acs.joc.4c00226
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  9. Article: [Liver fibrosis:underlying mechanisms and clinical implication].

    Inagaki, Yutaka

    Nihon Shokakibyo Gakkai zasshi The Japanese journal of gastro-enterology

    2019  Volume 117, Issue 1, Page(s) 9–19

    MeSH term(s) Humans ; Liver Cirrhosis
    Language Japanese
    Publishing date 2019-12-23
    Publishing country Japan
    Document type Journal Article
    ZDB-ID 708695-7
    ISSN 1349-7693 ; 0446-6586
    ISSN (online) 1349-7693
    ISSN 0446-6586
    DOI 10.11405/nisshoshi.117.9
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Palladium-Catalyzed Addition of Trifluoroacetylsilanes to Alkenes and Allenes via the Cleavage of C-Si Bonds.

    Inagaki, Tetsuya / Akita, Yuki / Tobisu, Mamoru

    Organic letters

    2024  Volume 26, Issue 10, Page(s) 2141–2145

    Abstract: The palladium-catalyzed addition of trifluoroacetylsilanes to alkenes and allenes via the cleavage of the C-Si bonds is reported. When alkenes are used, cyclopropanation occurs to afford cyclopropane derivatives bearing ... ...

    Abstract The palladium-catalyzed addition of trifluoroacetylsilanes to alkenes and allenes via the cleavage of the C-Si bonds is reported. When alkenes are used, cyclopropanation occurs to afford cyclopropane derivatives bearing CF
    Language English
    Publishing date 2024-03-05
    Publishing country United States
    Document type Journal Article
    ISSN 1523-7052
    ISSN (online) 1523-7052
    DOI 10.1021/acs.orglett.4c00595
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