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Article: First report and phylogenetic analysis of porcine deltacoronavirus in Mexico

Pérez‐Rivera, Claudia / Ramírez‐Mendoza, Humberto / Mendoza‐Elvira, Susana / Segura‐Velázquez, Rene / Sánchez‐Betancourt, José Ivan

Transboundary and emerging diseases. 2019 July, v. 66, no. 4

2019

Abstract: Porcine deltacoronavirus has caused great economic losses in the swine industry worldwide. In this study, we carried out the first detection, sequencing and characterization of this virus in Mexico. We analysed 885 rectal samples by multiplex RT‐PCR to ... ...

Abstract	Porcine deltacoronavirus has caused great economic losses in the swine industry worldwide. In this study, we carried out the first detection, sequencing and characterization of this virus in Mexico. We analysed 885 rectal samples by multiplex RT‐PCR to determine coinfections. In addition, the Spike gene was amplified, sequenced and analysed phylogenetically. We found 85 positive samples for porcine deltacoronavirus, representing 9.6% of the total samples, and we determined that the most frequent coinfection was with porcine epidemic diarrhoea virus (54.1%). Four sequences of Mexican isolates were most closely related to those of the United States. The antigenic regions and the glycosylation site of the strains obtained coincide with those previously reported. This relationship is probably related to the commercial exchange of pigs between the US and Mexico and the geographical proximity of these two countries.
Keywords	Deltacoronavirus ; Porcine epidemic diarrhea virus ; emerging diseases ; genes ; glycosylation ; mixed infection ; phylogeny ; reverse transcriptase polymerase chain reaction ; swine ; viruses ; Mexico ; United States ; covid19
Language	English
Dates of publication	2019-07
Size	p. 1436-1441.
Publishing place	John Wiley & Sons, Ltd
Document type	Article
Note	JOURNAL ARTICLE
ZDB-ID	2414822-2
ISSN	1865-1682 ; 1865-1674
ISSN (online)	1865-1682
ISSN	1865-1674
DOI	10.1111/tbed.13193
Database	NAL-Catalogue (AGRICOLA)

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Article ; Online: First report and phylogenetic analysis of porcine deltacoronavirus in Mexico.

Pérez-Rivera, Claudia / Ramírez-Mendoza, Humberto / Mendoza-Elvira, Susana / Segura-Velázquez, Rene / Sánchez-Betancourt, José Ivan

Transboundary and emerging diseases

2019 Volume 66, Issue 4, Page(s) 1436–1441

Abstract	Porcine deltacoronavirus has caused great economic losses in the swine industry worldwide. In this study, we carried out the first detection, sequencing and characterization of this virus in Mexico. We analysed 885 rectal samples by multiplex RT-PCR to determine coinfections. In addition, the Spike gene was amplified, sequenced and analysed phylogenetically. We found 85 positive samples for porcine deltacoronavirus, representing 9.6% of the total samples, and we determined that the most frequent coinfection was with porcine epidemic diarrhoea virus (54.1%). Four sequences of Mexican isolates were most closely related to those of the United States. The antigenic regions and the glycosylation site of the strains obtained coincide with those previously reported. This relationship is probably related to the commercial exchange of pigs between the US and Mexico and the geographical proximity of these two countries.
MeSH term(s)	Animals ; Coronavirus Infections/epidemiology ; Coronavirus Infections/veterinary ; Coronavirus Infections/virology ; Mexico/epidemiology ; Porcine epidemic diarrhea virus/genetics ; Porcine epidemic diarrhea virus/isolation & purification ; Prevalence ; Spike Glycoprotein, Coronavirus/analysis ; Swine ; Swine Diseases/epidemiology ; Swine Diseases/virology
Chemical Substances	Spike Glycoprotein, Coronavirus
Keywords	covid19
Language	English
Publishing date	2019-04-16
Publishing country	Germany
Document type	Journal Article
ZDB-ID	2414822-2
ISSN	1865-1682 ; 1865-1674
ISSN (online)	1865-1682
ISSN	1865-1674
DOI	10.1111/tbed.13193
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Article ; Online: The Road to Malignant Cell Transformation after Particulate Matter Exposure: From Oxidative Stress to Genotoxicity.

Santibáñez-Andrade, Miguel / Quezada-Maldonado, Ericka Marel / Rivera-Pineda, Andrea / Chirino, Yolanda I / García-Cuellar, Claudia M / Sánchez-Pérez, Yesennia

International journal of molecular sciences

2023 Volume 24, Issue 2

Abstract: In cells, oxidative stress is an imbalance between the production/accumulation of oxidants and the ability of the antioxidant system to detoxify these reactive products. Reactive oxygen species (ROS), cause multiple cellular damages through their ... ...

Abstract	In cells, oxidative stress is an imbalance between the production/accumulation of oxidants and the ability of the antioxidant system to detoxify these reactive products. Reactive oxygen species (ROS), cause multiple cellular damages through their interaction with biomolecules such as lipids, proteins, and DNA. Genotoxic damage caused by oxidative stress has become relevant since it can lead to mutation and play a central role in malignant transformation. The evidence describes chronic oxidative stress as an important factor implicated in all stages of the multistep carcinogenic process: initiation, promotion, and progression. In recent years, ambient air pollution by particulate matter (PM) has been cataloged as a cancer risk factor, increasing the incidence of different types of tumors. Epidemiological and toxicological evidence shows how PM-induced oxidative stress could mediate multiple events oriented to carcinogenesis, such as proliferative signaling, evasion of growth suppressors, resistance to cell death, induction of angiogenesis, and activation of invasion/metastasis pathways. In this review, we summarize the findings regarding the involvement of oxidative and genotoxic mechanisms generated by PM in malignant cell transformation. We also discuss the importance of new approaches oriented to studying the development of tumors associated with PM with more accuracy, pursuing the goal of weighing the impact of oxidative stress and genotoxicity as one of the main mechanisms associated with its carcinogenic potential.
MeSH term(s)	Humans ; Particulate Matter/toxicity ; Oxidative Stress ; Reactive Oxygen Species/metabolism ; Neoplasms/chemically induced ; Carcinogens ; DNA Damage ; Air Pollutants/toxicity
Chemical Substances	Particulate Matter ; Reactive Oxygen Species ; Carcinogens ; Air Pollutants
Language	English
Publishing date	2023-01-16
Publishing country	Switzerland
Document type	Journal Article ; Review
ZDB-ID	2019364-6
ISSN	1422-0067 ; 1422-0067 ; 1661-6596
ISSN (online)	1422-0067
ISSN	1422-0067 ; 1661-6596
DOI	10.3390/ijms24021782
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Article ; Online: [No title information]

Rivera-Rivera, Leonor / Palacios-Hernández, Bruma / Austria-Corrales, Fernando / Séris-Martínez, Marina / Pérez-Amezcua, Berenice / Jiménez-Tapia, Alberto / Reynales-Shigematsu, Luz Myriam / Toledano-Toledano, Filiberto / Gómez-García, José Alberto / Astudillo-García, Claudia I

Salud publica de Mexico

2023 Volume 65, Issue 4, jul-ago, Page(s) 344–352

Abstract: Objetivo: Analizar la estructura factorial, la validez convergente y divergente de la Escala Columbia de Severidad Suicida (CSSRS) y el Cuestionario de Eventos de Vida Estresantes (EVE) y medir la asociación entre EVE y conducta suicida (CS) en mujeres ... ...

Title translation	Eventos de vida estresantes y su efecto en la conducta suicida en mujeres durante la pandemia por Covid-19 en México.
Abstract	Objetivo: Analizar la estructura factorial, la validez convergente y divergente de la Escala Columbia de Severidad Suicida (CSSRS) y el Cuestionario de Eventos de Vida Estresantes (EVE) y medir la asociación entre EVE y conducta suicida (CS) en mujeres mexicanas durante la pandemia por Covid-19. Material y métodos. Se usaron datos de 2 398 mujeres que participaron en un estudio multicéntrico, realizado en México entre mayo y octubre de 2021. La información se recolectó mediante un cuestionario en línea que incluyó la CSSRS y el EVE. Se hizo un análisis factorial confirmatorio para valorar el ajuste de los modelos. Resultados: El modelo final mostró asociación entre los EVE y la CS, y tuvo a la violencia como variable central. Dicho modelo presentó un ajuste adecuado (CFI = 0.950, IFI = 0.950, MFI = 0.975, RMSEA = 0.031, CI RMSEA = 0.026-0.036). Conclusiones: La pandemia por Covid-19 evidenció la necesidad de crear e implementar estrategias que promuevan el cuidado de la salud mental, reduzcan la exposición a la violencia y faciliten los procesos de duelo para prevenir la CS en mujeres mexicanas.
Language	Spanish
Publishing date	2023-07-15
Publishing country	Mexico
Document type	English Abstract ; Journal Article
ZDB-ID	954220-6
ISSN	1606-7916 ; 0036-3634
ISSN (online)	1606-7916
ISSN	0036-3634
DOI	10.21149/14552
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Article ; Online: Presence of methanogenic archaea in necrotic root canals of patients with or without type 2 diabetes mellitus.

Soza-Bolaños, Ana I / Domínguez-Pérez, Rubén A / Ayala-Herrera, José L / Pérez-Serrano, Rosa M / Soto-Barreras, Uriel / Espinosa-Cristóbal, León F / Rivera-Albarrán, Claudia A / Zaldívar-Lelo de Larrea, Guadalupe

Australian endodontic journal : the journal of the Australian Society of Endodontology Inc

2023 Volume 49, Issue 3, Page(s) 641–647

Abstract: Theoretically, a necrotic root canal fulfils all requirements as a niche for methanogens to inhabit. However, their presence in it and its implication in apical periodontitis (AP) is controversial. Therefore, to contribute to ending the controversy, this ...

Abstract	Theoretically, a necrotic root canal fulfils all requirements as a niche for methanogens to inhabit. However, their presence in it and its implication in apical periodontitis (AP) is controversial. Therefore, to contribute to ending the controversy, this study aimed to detect and compare methanogens' presence in two distinct niches with supposedly different microenvironments; both were necrotic root canals associated with AP but one from patients with type 2 diabetes mellitus (T2DM) while the other from non-diabetic patients. A clinical examination was performed on 65 T2DM patients and 73 non-diabetic controls. Samples from necrotic root canals were obtained, and methanogens were identified. The presence of methanogens was three times higher (27.6%) in the T2DM group than in non-diabetic patients (8.2%). In addition, methanogens' presence was associated with a higher prevalence of periapical symptoms.
MeSH term(s)	Humans ; Diabetes Mellitus, Type 2/complications ; Dental Pulp Cavity ; Archaea ; Root Canal Therapy ; Periapical Periodontitis/diagnostic imaging ; Periapical Periodontitis/therapy ; Necrosis ; Euryarchaeota
Language	English
Publishing date	2023-09-15
Publishing country	Australia
Document type	Journal Article
ZDB-ID	2146484-4
ISSN	1747-4477 ; 1329-1947
ISSN (online)	1747-4477
ISSN	1329-1947
DOI	10.1111/aej.12797
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Article ; Online: Perceptions of dengue risk and acceptability of a dengue vaccine in residents of Puerto Rico.

Rosado-Santiago, Coral / Pérez-Guerra, Carmen L / Vélez-Agosto, Nicole M / Colón-Burgos, Claudia / Marrero-Santos, Karla M / Partridge, Susanna K / Lockwood, Amy E / Young, Cathy / Waterman, Steve H / Paz-Bailey, Gabriela / Cardona-Gerena, Iris / Rivera, Angel / Adams, Laura E / Wong, Joshua M

Human vaccines & immunotherapeutics

2024 Volume 20, Issue 1, Page(s) 2323264

Abstract: Dengvaxia is the first dengue vaccine recommended in the United States (U.S.). It is recommended for children aged 9-16 y with laboratory-confirmed previous dengue infection and living in areas where dengue is endemic. We conducted focus groups with ... ...

Abstract	Dengvaxia is the first dengue vaccine recommended in the United States (U.S.). It is recommended for children aged 9-16 y with laboratory-confirmed previous dengue infection and living in areas where dengue is endemic. We conducted focus groups with parents and in-depth interviews with key informants (i.e. practicing pediatricians, physicians from immunization clinics, university researchers, and school officials) in Puerto Rico (P.R.) to examine acceptability, barriers, and motivators to vaccinate with Dengvaxia. We also carried out informal meetings and semi-structured interviews to evaluate key messages and educational materials with pediatricians and parents. Barriers to vaccination included lack of information, distrust toward new vaccines, vaccine side effects and risks, and high cost of/lack of insurance coverage for laboratory tests and vaccines. Motivators included clear information about the vaccine, a desire to prevent future dengue infections, the experience of a previous dengue infection or awareness of dengue fatality, vaccine and laboratory tests covered by health insurance, availability of rapid test results and vaccine appointments. School officials and parents agreed parents would pay a deductible of $5-20 for Dengvaxia. For vaccine information dissemination, parents preferred an educational campaign through traditional media and social media, and one-on-one counseling of parents by healthcare providers. Education about this vaccine to healthcare providers will help them answer parents' questions. Dengvaxia acceptability in P.R. will increase by addressing motivators and barriers to vaccination and by disseminating vaccine information in plain language through spokespersons from health institutions in P.R.
MeSH term(s)	Child ; Humans ; Dengue/prevention & control ; Dengue Vaccines/adverse effects ; Parents ; Puerto Rico/epidemiology ; United States ; Vaccination/methods ; Vaccines ; Adolescent
Chemical Substances	Dengue Vaccines ; Vaccines
Language	English
Publishing date	2024-04-10
Publishing country	United States
Document type	Journal Article
ZDB-ID	2664176-8
ISSN	2164-554X ; 2164-5515
ISSN (online)	2164-554X
ISSN	2164-5515
DOI	10.1080/21645515.2024.2323264
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Article ; Online: Chronotropic Response and Heart Rate Variability before and after a 160 m Walking Test in Young, Middle-Aged, Frail, and Non-Frail Older Adults.

Álvarez-Millán, Lesli / Lerma, Claudia / Castillo-Castillo, Daniel / Quispe-Siccha, Rosa M / Pérez-Pacheco, Argelia / Rivera-Sánchez, Jesús / Fossion, Ruben

International journal of environmental research and public health

2022 Volume 19, Issue 14

Abstract: The frailty syndrome is characterized by a decreased capacity to adequately respond to stressors. One of the most impaired physiological systems is the autonomous nervous system, which can be assessed through heart rate (HR) variability (HRV) analysis. ... ...

Abstract	The frailty syndrome is characterized by a decreased capacity to adequately respond to stressors. One of the most impaired physiological systems is the autonomous nervous system, which can be assessed through heart rate (HR) variability (HRV) analysis. In this article, we studied the chronotropic response (HR and HRV) to a walking test. We also analyzed HRV indices in rest as potential biomarkers of frailty. For this, a 160 m-walking test and two standing rest tests (before and after the walking) were performed by young (19−29 years old, n = 21, 57% women), middle-aged (30−59 years old, n = 16, 62% women), and frail older adults (>60 years old, n = 28, 40% women) and non-frail older adults (>60 years old, n = 15, 71% women), classified with the FRAIL scale and the Clinical Frailty Scale (CFS). Frequency domain parameters better allowed to distinguish between frail and non-frail older adults (low-frequency power LF, high-frequency power HF (nu), LF/HF ratio, and ECG-derived respiration rate EDR). Frail older adults showed an increased HF (nu) and EDR and a reduced LF (nu) and LF/HF compared to non-frail older adults. The increase in HF (nu) could be due to a higher breathing effort. Our results showed that a walk of 160 m is a sufficient cardiovascular stressor to exhibit an attenuated autonomic response in frail older adults. Several HRV indices showed to be potential biomarkers of frailty, being LF (nu) and the time required to reach the maximum HR the best candidates.
MeSH term(s)	Adult ; Aged ; Autonomic Nervous System/physiology ; Female ; Frail Elderly ; Frailty ; Heart Rate/physiology ; Humans ; Male ; Middle Aged ; Walking ; Young Adult
Language	English
Publishing date	2022-07-09
Publishing country	Switzerland
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2175195-X
ISSN	1660-4601 ; 1661-7827
ISSN (online)	1660-4601
ISSN	1661-7827
DOI	10.3390/ijerph19148413
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Article ; Online: The Columbia-suicide severity rating scale: validity and psychometric properties of an online Spanish-language version in a Mexican population sample.

Austria-Corrales, Fernando / Jiménez-Tapia, Alberto / Astudillo-García, Claudia Iveth / Arenas-Landgrave, Paulina / Xochihua-Tlecuitl, Tonatiuh / Cruz-Cruz, Copytzy / Rivera-Rivera, Leonor / Gómez-García, José Alberto / Palacios-Hernández, Bruma / Pérez-Amezcua, Berenice / Toledano-Toledano, Filiberto / Richards, Jenelle / Galynker, Igor

Frontiers in public health

2023 Volume 11, Page(s) 1157581

Abstract: The aim of this study was to evaluate the validity and psychometric properties in a Mexican sample of a Spanish-language online version of the Columbia-Suicide Severity Rating Scale (C-SSRS). Data were collected between May and October 2021 from 3,645 ... ...

Abstract	The aim of this study was to evaluate the validity and psychometric properties in a Mexican sample of a Spanish-language online version of the Columbia-Suicide Severity Rating Scale (C-SSRS). Data were collected between May and October 2021 from 3,645 participants aged 18 years and over, who agreed to complete the questionnaire. Reliability analysis, confirmatory factor analysis (CFA), and psychometric properties were calculated using a two-parameter model. The results showed a reasonable level of reliability with a Cronbach's alpha of 0.814, and evidence of unidimensionality, and construct validity for suicide risk at three risk levels: low, medium, and high. Analysis of the items suggests that they are consistent with the proposed theoretical model. Our results also demonstrate that the parameters are stable and able to efficiently discriminate individuals at high risk of suicide. We propose the use of this version of the C-SSRS in the Spanish-speaking population, since it is a multifactorial assessment of suicide risk and the inclusion of other clinical and risk factor assessments for a more comprehensive evaluation.
MeSH term(s)	Humans ; Adolescent ; Adult ; Psychometrics ; Reproducibility of Results ; Factor Analysis, Statistical ; Suicide ; Language
Language	English
Publishing date	2023-09-05
Publishing country	Switzerland
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2711781-9
ISSN	2296-2565 ; 2296-2565
ISSN (online)	2296-2565
ISSN	2296-2565
DOI	10.3389/fpubh.2023.1157581
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Article ; Online: Insights into Systems for Iron-Sulfur Cluster Biosynthesis in Acidophilic Microorganisms.

Myriam, Pérez / Braulio, Paillavil / Javiera, Rivera-Araya / Claudia, Muñoz-Villagrán / Omar, Orellana / Renato, Chávez / Gloria, Levicán

Journal of microbiology and biotechnology

2022 Volume 32, Issue 9, Page(s) 1110–1119

Abstract: Fe-S clusters are versatile and essential cofactors that participate in multiple and fundamental biological processes. ... ...

Abstract	Fe-S clusters are versatile and essential cofactors that participate in multiple and fundamental biological processes. In
MeSH term(s)	Cell Extracts ; Escherichia coli/genetics ; Escherichia coli/metabolism ; Escherichia coli Proteins/genetics ; Escherichia coli Proteins/metabolism ; Iron/metabolism ; Iron-Sulfur Proteins/genetics ; Iron-Sulfur Proteins/metabolism ; Operon ; Sulfur/metabolism
Chemical Substances	Cell Extracts ; Escherichia coli Proteins ; Iron-Sulfur Proteins ; Sulfur (70FD1KFU70) ; Iron (E1UOL152H7)
Language	English
Publishing date	2022-08-19
Publishing country	Korea (South)
Document type	Journal Article
ZDB-ID	2412195-2
ISSN	1738-8872 ; 1738-8872
ISSN (online)	1738-8872
ISSN	1738-8872
DOI	10.4014/jmb.2206.06045
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Article ; Online: Effect of 3D-MOT training on the execution of manual dexterity skills in a population of older adults with mild cognitive impairment and mild dementia.

Burgos-Morelos, Laura P / Rivera-Sánchez, José de Jesús / Santana-Vargas, Ángel Daniel / Arreola-Mora, Claudia / Chávez-Negrete, Adolfo / Lugo, J Eduardo / Faubert, Jocelyn / Pérez-Pacheco, Argelia

Applied neuropsychology. Adult

2023 , Page(s) 1–10

Abstract: Computerized cognitive training tools are an alternative to preventive treatments related to cognitive impairment and aging. In this study, the transfer of 3D multiple object tracking (3D-MOT) training on manual dexterity concerning fine and gross motor ... ...

Abstract	Computerized cognitive training tools are an alternative to preventive treatments related to cognitive impairment and aging. In this study, the transfer of 3D multiple object tracking (3D-MOT) training on manual dexterity concerning fine and gross motor skills in 38 elderly participants, half of them with mild cognitive impairment (MCI) and the other half with mild dementia (MD) was explored. A total of 36 sessions of the 3D-MOT training program were administered to the subjects. The Montreal Cognitive Assessment (MoCA) test was used to assess the baseline cognitive status of the participants. Two batteries of manual motor skills (GPT and MMDT) were applied before and after the 3D-MOT training program. The results showed an interaction effect of training and improvement in manual dexterity tests, from the first training session until the fifteenth session, and after this range of sessions, the interaction effect was lost. However, the training effect continued to the end of the thirty-six-session program. The experimental results show the effect of cognitive training on the improvement of motor skills in older adults. This type of intervention could have a broad impact on the aging population in terms of their attention, executive functions, and therefore, their quality of life.
Language	English
Publishing date	2023-01-25
Publishing country	United States
Document type	Journal Article
ZDB-ID	2673736-X
ISSN	2327-9109 ; 2327-9095
ISSN (online)	2327-9109
ISSN	2327-9095
DOI	10.1080/23279095.2023.2169884
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