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  1. Article ; Online: Erratum for Sazed et al., "Direct Nasal Swab for Rapid Test and Saliva as an Alternative Biological Sample for RT-PCR in COVID-19 Diagnosis".

    Sazed, Saiful Arefeen / Kibria, Mohammad Golam / Zamil, Md Fahad / Hossain, Mohammad Sharif / Khan, Jeba Zaman / Juthi, Rifat Tasnim / Hossain, Mohammad Enayet / Ahmed, Dilruba / Noor, Zannatun / Haque, Rashidul / Alam, Mohammad Shafiul

    Microbiology spectrum

    2024  Volume 12, Issue 3, Page(s) e0401423

    Language English
    Publishing date 2024-01-22
    Publishing country United States
    Document type Journal Article ; Published Erratum
    ZDB-ID 2807133-5
    ISSN 2165-0497 ; 2165-0497
    ISSN (online) 2165-0497
    ISSN 2165-0497
    DOI 10.1128/spectrum.04014-23
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Biomonitoring potentially toxic elements in atmospheric particulate matter of greater Dhaka region using leaves of higher plants.

    Jashim, Zuairia Binte / Shahrukh, Saif / Hossain, Shahid Akhtar / Jahan-E-Gulshan / Huda, Muhammad Nurul / Islam, Md Mominul / Hossain, Mohammad Enayet

    Environmental monitoring and assessment

    2024  Volume 196, Issue 5, Page(s) 468

    Abstract: In this study, four different plant species, namely Artocarpus heterophyllus, Mangifera indica, Psidium guajava, and Swietenia mahagoni, were selected from seven different locations to assess the feasibility of using them as a cost-effective alternative ... ...

    Abstract In this study, four different plant species, namely Artocarpus heterophyllus, Mangifera indica, Psidium guajava, and Swietenia mahagoni, were selected from seven different locations to assess the feasibility of using them as a cost-effective alternative for biomonitoring air quality. Atmospheric coarse particulate matter (PM
    MeSH term(s) Plant Leaves/chemistry ; Air Pollutants/analysis ; Environmental Monitoring/methods ; Metals, Heavy/analysis ; Particulate Matter/analysis ; Mangifera/chemistry ; Bangladesh ; Psidium/chemistry
    Chemical Substances Air Pollutants ; Metals, Heavy ; Particulate Matter
    Language English
    Publishing date 2024-04-24
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 782621-7
    ISSN 1573-2959 ; 0167-6369
    ISSN (online) 1573-2959
    ISSN 0167-6369
    DOI 10.1007/s10661-024-12612-3
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Evaluation of seasonal changes in physicochemical and bacteriological parameters of Gomti River in Bangladesh

    Farzana Yasmin / Tania Hossain / Saif Shahrukh / Mohammad Enayet Hossain / Gazi Nurun Nahar Sultana

    Environmental and Sustainability Indicators, Vol 17, Iss , Pp 100224- (2023)

    2023  

    Abstract: This study was undertaken to investigate the current pollution status of the Gomti River in Bangladesh by collecting water samples from twenty sites along the 120 km stretch of the Gomti River during the rainy (June 2019) and dry (January 2020) seasons. ... ...

    Abstract This study was undertaken to investigate the current pollution status of the Gomti River in Bangladesh by collecting water samples from twenty sites along the 120 km stretch of the Gomti River during the rainy (June 2019) and dry (January 2020) seasons. The collected samples were examined for their physicochemical parameters (pH, EC, TDS, TOC, and turbidity), heavy metals, namely chromium (Cr), copper (Cu), iron (Fe), nickel (Ni), lead (Pb), and zinc (Zn), and bacteriological parameters (aerobic heterotrophic bacteria and total coliforms). All the physicochemical parameters obtained were within the recommended guidelines set by the World Health Organization (WHO, 2011). Among the metals, Fe, Ni, and Zn were found to be higher than the recommended guideline values in the dry season. A significant (p < 0.05) positive correlation was found between Cu and Zn indicating that water pollution by these two metals may have originated from common anthropogenic sources. The present study revealed, for the first time, that the river Gomti was considerably polluted with bacterial populations. Identified in the water samples include Shigella spp., Salmonella spp., Escherichia coli, Bacillus licheniformis, Alcaligenes sp., Bacillus subtilis, Klebsiella sp., Bacillus megaterium, Enterobacter sp., and Staphylococcus sp. The presence of Shigella spp., Salmonella spp., and Escherichia coli in the bacterial isolates is certainly a major water quality concern. Aerobic heterotrophic bacteria and total coliform counts were found to be 0.45 × 102 to 1.84 × 104 CFU/mL and 0.05 × 102 to 7.32 × 103 CFU/mL, respectively, which were above the permissible limits of WHO (2011) and are deemed unfit for drinking and domestic purposes, and fish culture. From this study, the priority pollutants of concern in the Gomti River water are Fe, Ni, Zn, aerobic heterotrophic bacteria, and total coliforms. Considering the importance of the Gomti River in the national economy of Bangladesh, appropriate water management along with the Best Management ...
    Keywords Water pollution ; Heavy metals ; Total coliform ; Seasonal variation ; Gomti River ; Environmental sciences ; GE1-350
    Subject code 333
    Language English
    Publishing date 2023-02-01T00:00:00Z
    Publisher Elsevier
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  4. Article ; Online: Genome sequence of white spot syndrome virus (WSSV) infecting cultured black tiger shrimp (

    Islam, S M Rafiqul / Ahmed, Robel / Sharmen, Farjana / Hossain, Md Mobarok / Chakma, Kallyan / Tanni, Afroza Akter / Akash, Md Ashikur Alim / Hossain, Mohammad Enayet / Chowdhury, M Shah Nawaz / Siddiki, Amam Zonaed / Hossain, Anwar / Mandal, Shankar C / Crandall, Keith A / Rahnavard, Ali / Sharifuzzaman, S M / Mannan, Adnan

    Microbiology resource announcements

    2024  Volume 13, Issue 4, Page(s) e0121123

    Abstract: The white spot syndrome virus (WSSV) is a causative agent of white spot disease (WSD) in crustaceans, especially in cultivated black tiger shrimp ( ...

    Abstract The white spot syndrome virus (WSSV) is a causative agent of white spot disease (WSD) in crustaceans, especially in cultivated black tiger shrimp (
    Language English
    Publishing date 2024-03-19
    Publishing country United States
    Document type Journal Article
    ISSN 2576-098X
    ISSN (online) 2576-098X
    DOI 10.1128/mra.01211-23
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: SARS-CoV-2 Omicron variants in Bangladesh: Pandemic to endemic.

    Jubair, Mohammad / Begum, Mst Noorjahan / Rahman, Sezanur / Haider, Sourav Mohammad Arefeen / Moon, Shovan B / Hossain, Mohammad Enayet / Rahman, Mohammed Ziaur / Khan, Manjur H / Alam, Ahmed N / Shirin, Tahmina / Afrad, Mokibul H / Qadri, Firdausi / Rahman, Mustafizur

    Health science reports

    2023  Volume 6, Issue 3, Page(s) e1134

    Language English
    Publishing date 2023-03-02
    Publishing country United States
    Document type Journal Article
    ISSN 2398-8835
    ISSN (online) 2398-8835
    DOI 10.1002/hsr2.1134
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Prevalence of blindness and its determinants in Bangladeshi adult population

    Mustafizur Rahman / Mohammad Moniruzzaman / M Mostafa Zaman / A H M Enayet Hossain / Shawkat Ara Shakoor / Mahfuzur Rahman Bhuiyan / Ferdous Hakim

    BMJ Open, Vol 12, Iss

    results from a national cross-sectional survey

    2022  Volume 4

    Keywords Medicine ; R
    Language English
    Publishing date 2022-04-01T00:00:00Z
    Publisher BMJ Publishing Group
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  7. Article ; Online: Monitoring SARS-CoV-2 variants in wastewater of Dhaka City, Bangladesh: approach to complement public health surveillance systems.

    Haque, Rehnuma / Hossain, Mohammad Enayet / Miah, Mojnu / Rahman, Mahbubur / Amin, Nuhu / Rahman, Ziaur / Islam, Md Shariful / Rahman, Mohammed Ziaur

    Human genomics

    2023  Volume 17, Issue 1, Page(s) 58

    Abstract: Background: Wastewater-based epidemiological surveillance has been considered a powerful tool for early detection and monitoring of the dynamics of SARS-CoV-2 and its lineages circulating in a community. This study is aimed to investigate the complexity ...

    Abstract Background: Wastewater-based epidemiological surveillance has been considered a powerful tool for early detection and monitoring of the dynamics of SARS-CoV-2 and its lineages circulating in a community. This study is aimed to investigate the complexity of SARS-CoV-2 infection dynamics in Dhaka city by examining its genetic variants in wastewater. Also, the study seeks to determine a connection between the SARS-CoV-2 variations detected in clinical testing and those found in wastewater samples.
    Results: Out of 504 samples tested in RT-qPCR, 185 (36.7%) tested positive for SARS-CoV-2 viral RNA. The median log
    Conclusion: Environmental surveillance is useful for monitoring temporal and spatial trends of existing and emerging infectious diseases and supports evidence-based public health measures. The findings of this study supported the use of wastewater-based epidemiology and provided the baseline data for the dynamics of SARS-CoV-2 variants in the wastewater environment in Dhaka, Bangladesh.
    MeSH term(s) Humans ; SARS-CoV-2/genetics ; Bangladesh/epidemiology ; COVID-19/epidemiology ; Public Health Surveillance ; Wastewater ; Complement System Proteins ; RNA
    Chemical Substances Wastewater ; Complement System Proteins (9007-36-7) ; RNA (63231-63-0)
    Language English
    Publishing date 2023-07-07
    Publishing country England
    Document type Journal Article
    ZDB-ID 2147618-4
    ISSN 1479-7364 ; 1479-7364
    ISSN (online) 1479-7364
    ISSN 1479-7364
    DOI 10.1186/s40246-023-00505-4
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Identification of Novel Mutations in the N Gene of SARS-CoV-2 That Adversely Affect the Detection of the Virus by Reverse Transcription-Quantitative PCR.

    Hasan, Rashedul / Hossain, Mohammad Enayet / Miah, Mojnu / Hasan, Md Mahmudul / Rahman, Mustafizur / Rahman, Mohammed Ziaur

    Microbiology spectrum

    2021  Volume 9, Issue 1, Page(s) e0054521

    MeSH term(s) COVID-19/diagnosis ; COVID-19/virology ; COVID-19 Testing/methods ; Coronavirus Nucleocapsid Proteins/genetics ; Humans ; Mutation ; Phosphoproteins/genetics ; Polymerase Chain Reaction/methods ; RNA, Viral/analysis ; SARS-CoV-2/genetics ; SARS-CoV-2/isolation & purification
    Chemical Substances Coronavirus Nucleocapsid Proteins ; Phosphoproteins ; RNA, Viral ; nucleocapsid phosphoprotein, SARS-CoV-2
    Language English
    Publishing date 2021-08-25
    Publishing country United States
    Document type Letter ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S.
    ZDB-ID 2807133-5
    ISSN 2165-0497 ; 2165-0497
    ISSN (online) 2165-0497
    ISSN 2165-0497
    DOI 10.1128/Spectrum.00545-21
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Monitoring SARS-CoV-2 variants in wastewater of Dhaka City, Bangladesh

    Rehnuma Haque / Mohammad Enayet Hossain / Mojnu Miah / Mahbubur Rahman / Nuhu Amin / Ziaur Rahman / Md. Shariful Islam / Mohammed Ziaur Rahman

    Human Genomics, Vol 17, Iss 1, Pp 1-

    approach to complement public health surveillance systems

    2023  Volume 12

    Abstract: Abstract Background Wastewater-based epidemiological surveillance has been considered a powerful tool for early detection and monitoring of the dynamics of SARS-CoV-2 and its lineages circulating in a community. This study is aimed to investigate the ... ...

    Abstract Abstract Background Wastewater-based epidemiological surveillance has been considered a powerful tool for early detection and monitoring of the dynamics of SARS-CoV-2 and its lineages circulating in a community. This study is aimed to investigate the complexity of SARS-CoV-2 infection dynamics in Dhaka city by examining its genetic variants in wastewater. Also, the study seeks to determine a connection between the SARS-CoV-2 variations detected in clinical testing and those found in wastewater samples. Results Out of 504 samples tested in RT-qPCR, 185 (36.7%) tested positive for SARS-CoV-2 viral RNA. The median log10 concentration of SARS-CoV-2 N gene copies/Liter of wastewater (gc/L) was 5.2, and the median log10 concentration of ORF1ab was 4.9. To further reveal the genetic diversity of SARS-CoV-2, ten samples with ORF1ab real-time RT-PCR cycle threshold (Ct) values ranging from 28.78 to 32.13 were subjected to whole genome sequencing using nanopore technology. According to clade classification, sequences from wastewater samples were grouped into 4 clades: 20A, 20B, 21A, 21J, and the Pango lineage, B.1, B.1.1, B.1.1.25, and B.1.617.2, with coverage ranging from 94.2 to 99.8%. Of them, 70% belonged to clade 20B, followed by 10% to clade 20A, 21A, and 21J. Lineage B.1.1.25 was predominant in Bangladesh and phylogenetically related to the sequences from India, the USA, Canada, the UK, and Italy. The Delta variant (B.1.617.2) was first identified in clinical samples at the beginning of May 2021. In contrast, we found that it was circulating in the community and was detected in wastewater in September 2020. Conclusion Environmental surveillance is useful for monitoring temporal and spatial trends of existing and emerging infectious diseases and supports evidence-based public health measures. The findings of this study supported the use of wastewater-based epidemiology and provided the baseline data for the dynamics of SARS-CoV-2 variants in the wastewater environment in Dhaka, Bangladesh.
    Keywords COVID-19 ; Variants ; Wastewater ; Lineages ; Sequencing ; Low-middle-income countries ; Medicine ; R ; Genetics ; QH426-470
    Subject code 572
    Language English
    Publishing date 2023-07-01T00:00:00Z
    Publisher BMC
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  10. Article ; Online: SARS‐CoV‐2 Omicron variants in Bangladesh

    Mohammad Jubair / Mst. Noorjahan Begum / Sezanur Rahman / Sourav Mohammad Arefeen Haider / Shovan B. Moon / Mohammad Enayet Hossain / Mohammed Ziaur Rahman / Manjur H. Khan / Ahmed N. Alam / Tahmina Shirin / Mokibul H. Afrad / Firdausi Qadri / Mustafizur Rahman

    Health Science Reports, Vol 6, Iss 3, Pp n/a-n/a (2023)

    Pandemic to endemic

    2023  

    Keywords COVID‐19 ; Omicron ; protection ; reinfection ; SARS‐CoV‐2 ; XBB ; Medicine ; R
    Language English
    Publishing date 2023-03-01T00:00:00Z
    Publisher Wiley
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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