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  1. Article ; Online: Candidate Epigenetic Biomarker of Cognitive Trajectory: The Chicken or the Egg?

    Corley, Michael J / Yokoyama, Jennifer S

    Biological psychiatry

    2022  Volume 91, Issue 4, Page(s) 332–334

    MeSH term(s) Biomarkers ; Cognition ; Epigenesis, Genetic ; Epigenomics
    Chemical Substances Biomarkers
    Language English
    Publishing date 2022-01-20
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't ; Comment
    ZDB-ID 209434-4
    ISSN 1873-2402 ; 0006-3223
    ISSN (online) 1873-2402
    ISSN 0006-3223
    DOI 10.1016/j.biopsych.2021.11.014
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Emerging Single-cell Approaches to Understand HIV in the Central Nervous System.

    Corley, Michael J / Farhadian, Shelli F

    Current HIV/AIDS reports

    2021  Volume 19, Issue 1, Page(s) 113–120

    Abstract: Purpose of review: This review highlights emerging single-cell sequencing methods relevant to translational studies of HIV in the central nervous system (CNS), summarizes limited single-cell studies of HIV in the CNS, and discusses opportunities for ... ...

    Abstract Purpose of review: This review highlights emerging single-cell sequencing methods relevant to translational studies of HIV in the central nervous system (CNS), summarizes limited single-cell studies of HIV in the CNS, and discusses opportunities for future HIV translational CNS studies.
    Recent findings: Innovative methods utilizing single-cell technologies have advanced the study of genomes, proteomes, transcriptomes, and epigenomes at an enhanced resolution and depth. Single-cell analyses of central nervous system tissue, including autopsy brain and CSF cells, may shed light on CNS perturbations in people living with HIV. New strategies can distinguish distinct molecular identifies of rare infected cells at single-cell level, suggesting an opportunity to uncloak the molecular identity of hidden HIV in the CNS reservoir. Adoption of multimodal "omics" analyses to translational HIV studies and tissue compartments beyond blood will be critical to advancing our understanding of viral establishment, persistence, and eradication.
    MeSH term(s) Brain ; Central Nervous System ; HIV Infections ; HIV-1/physiology ; Humans
    Language English
    Publishing date 2021-11-25
    Publishing country United States
    Document type Journal Article ; Review ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 2151206-1
    ISSN 1548-3576 ; 1548-3568
    ISSN (online) 1548-3576
    ISSN 1548-3568
    DOI 10.1007/s11904-021-00586-7
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Cell-type specific impact of metformin on monocyte epigenetic age reversal in virally suppressed older people living with HIV.

    Corley, Michael J / Pang, Alina P S / Shikuma, Cecilia M / Ndhlovu, Lishomwa C

    Aging cell

    2023  Volume 23, Issue 1, Page(s) e13926

    Abstract: The anti-diabetic drug metformin may promote healthy aging. However, few clinical trials of metformin assessing biomarkers of aging have been completed. In this communication, we retrospectively examined the effect of metformin on epigenetic age using ... ...

    Abstract The anti-diabetic drug metformin may promote healthy aging. However, few clinical trials of metformin assessing biomarkers of aging have been completed. In this communication, we retrospectively examined the effect of metformin on epigenetic age using principal component (PC)-based epigenetic clocks, mitotic clocks, and pace of aging in peripheral monocytes and CD8
    MeSH term(s) Humans ; Aged ; Monocytes ; Metformin/pharmacology ; Metformin/therapeutic use ; CD8-Positive T-Lymphocytes ; Retrospective Studies ; Biomarkers ; Epigenesis, Genetic ; HIV Infections/drug therapy ; HIV Infections/genetics ; DNA Methylation
    Chemical Substances Metformin (9100L32L2N) ; Biomarkers
    Language English
    Publishing date 2023-09-07
    Publishing country England
    Document type Randomized Controlled Trial ; Journal Article
    ZDB-ID 2113083-8
    ISSN 1474-9726 ; 1474-9718
    ISSN (online) 1474-9726
    ISSN 1474-9718
    DOI 10.1111/acel.13926
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Inappropriate Prescribing of Antibiotics to Pediatric Patients Receiving Medicaid: Comparison of High-Volume and Non-High-Volume Antibiotic Prescribers-Kentucky, 2019.

    Wattles, Bethany A / Smith, Michael J / Feygin, Yana / Jawad, Kahir / Flinchum, Andrea / Corley, Brittany / Spicer, Kevin B

    Healthcare (Basel, Switzerland)

    2023  Volume 11, Issue 16

    Abstract: Inappropriate antibiotic prescribing to pediatric Medicaid patients was compared among high-volume and non-high-volume prescribers. High-volume prescribers had a higher percentage of inappropriate prescriptions than non-high-volume prescribers (17.2% ... ...

    Abstract Inappropriate antibiotic prescribing to pediatric Medicaid patients was compared among high-volume and non-high-volume prescribers. High-volume prescribers had a higher percentage of inappropriate prescriptions than non-high-volume prescribers (17.2% versus 15.8%,
    Language English
    Publishing date 2023-08-16
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2721009-1
    ISSN 2227-9032
    ISSN 2227-9032
    DOI 10.3390/healthcare11162307
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: In Reply to the Letter to the Editor Regarding "The Resident's Role in Global Neurosurgery".

    Lepard, Jacob R / Barthélemy, Ernest J / Corley, Jacquelyn / Nalwanga, Juliet / Dewan, Michael

    World neurosurgery

    2021  Volume 146, Page(s) 433

    MeSH term(s) Humans ; Neurosurgery ; Neurosurgical Procedures
    Language English
    Publishing date 2021-02-10
    Publishing country United States
    Document type Letter ; Comment
    ZDB-ID 2534351-8
    ISSN 1878-8769 ; 1878-8750
    ISSN (online) 1878-8769
    ISSN 1878-8750
    DOI 10.1016/j.wneu.2020.11.053
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Executive functions as a mediator of childhood maltreatment on adult psychopathology: A longitudinal mediation analysis comparing maltreatment factor models.

    Kent, Kyle R / Hopfer, Christian J / Corley, Robin P / Stallings, Michael C

    Child abuse & neglect

    2021  Volume 123, Page(s) 105369

    Abstract: Background: Childhood maltreatment (CM), executive functions (EFs), and psychiatric disorders all correlate highly. Changes in EFs during adolescence related to CM present a possible mediating mechanism for the development of psychiatric disorders, yet ... ...

    Abstract Background: Childhood maltreatment (CM), executive functions (EFs), and psychiatric disorders all correlate highly. Changes in EFs during adolescence related to CM present a possible mediating mechanism for the development of psychiatric disorders, yet no study has analyzed this longitudinally while comparing predictive capacity of different CM factor structures. We hypothesized that changes in EFs from adolescence to adulthood would mediate, in part, associations between CM, internalizing disorders (INT), and anti-social personality disorder (ASPD) while different subtypes of CM would differentially predict INT and ASPD.
    Objective: This study longitudinally examined the mediating effects of EFs on associations between CM, INT, and ASPD while comparing prediction of two CM factor structures.
    Participants: High-risk subjects selected for drug use in adolescence (N = 658) from mean ages 16 to 23.
    Methods: A Bayesian structural equation model was deployed to analyze change in EFs as a mediator of the relationship between CM and adult INT and ASPD. CM was measured using two factor structures: a single overall factor and four correlated factors representing CM subtypes.
    Results: CM significantly predicted INT and ASPD but there was no evidence that the relationship was substantially mediated through EFs. High correlations among subtypes of CM limited the unique predictions of each subtype on INT and ASPD.
    Conclusion: In this high-risk sample, the collinearity of CM subtypes obscured their predictions of outcome measures supporting the use of one CM factor. EFs did not significantly mediate associations between CM and psychiatric disorders, but further research on these relationships is warranted.
    MeSH term(s) Adolescent ; Adult ; Bayes Theorem ; Child ; Child Abuse/psychology ; Executive Function ; Humans ; Mediation Analysis ; Mental Disorders/etiology ; Young Adult
    Language English
    Publishing date 2021-12-06
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 799143-5
    ISSN 1873-7757 ; 0145-2134
    ISSN (online) 1873-7757
    ISSN 0145-2134
    DOI 10.1016/j.chiabu.2021.105369
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: A machine learning approach utilizing DNA methylation as an accurate classifier of COVID-19 disease severity.

    Bowler, Scott / Papoutsoglou, Georgios / Karanikas, Aristides / Tsamardinos, Ioannis / Corley, Michael J / Ndhlovu, Lishomwa C

    Scientific reports

    2022  Volume 12, Issue 1, Page(s) 17480

    Abstract: Since the onset of the COVID-19 pandemic, increasing cases with variable outcomes continue globally because of variants and despite vaccines and therapies. There is a need to identify at-risk individuals early that would benefit from timely medical ... ...

    Abstract Since the onset of the COVID-19 pandemic, increasing cases with variable outcomes continue globally because of variants and despite vaccines and therapies. There is a need to identify at-risk individuals early that would benefit from timely medical interventions. DNA methylation provides an opportunity to identify an epigenetic signature of individuals at increased risk. We utilized machine learning to identify DNA methylation signatures of COVID-19 disease from data available through NCBI Gene Expression Omnibus. A training cohort of 460 individuals (164 COVID-19-infected and 296 non-infected) and an external validation dataset of 128 individuals (102 COVID-19-infected and 26 non-COVID-associated pneumonia) were reanalyzed. Data was processed using ChAMP and beta values were logit transformed. The JADBio AutoML platform was leveraged to identify a methylation signature associated with severe COVID-19 disease. We identified a random forest classification model from 4 unique methylation sites with the power to discern individuals with severe COVID-19 disease. The average area under the curve of receiver operator characteristic (AUC-ROC) of the model was 0.933 and the average area under the precision-recall curve (AUC-PRC) was 0.965. When applied to our external validation, this model produced an AUC-ROC of 0.898 and an AUC-PRC of 0.864. These results further our understanding of the utility of DNA methylation in COVID-19 disease pathology and serve as a platform to inform future COVID-19 related studies.
    MeSH term(s) Humans ; COVID-19/diagnosis ; COVID-19/genetics ; DNA Methylation ; Pandemics ; Machine Learning ; Severity of Illness Index
    Language English
    Publishing date 2022-10-19
    Publishing country England
    Document type Journal Article
    ZDB-ID 2615211-3
    ISSN 2045-2322 ; 2045-2322
    ISSN (online) 2045-2322
    ISSN 2045-2322
    DOI 10.1038/s41598-022-22201-4
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Tumor nano-lysate activates dendritic cells to evoke a preventative immune response.

    Dombroski, Jenna A / Fabiano, Abigail R / Knoblauch, Samantha V / Rowland, Schyler J / Gibson-Corley, Katherine N / King, Michael R

    Journal of immunological methods

    2023  Volume 524, Page(s) 113601

    Abstract: A tumor nano-lysate "TNL" vaccine comprised of sonicated 4T1 cells was developed, characterized and implemented for the prevention of triple-negative breast cancer. This study aimed to gain a better understanding of the immune response behind the success ...

    Abstract A tumor nano-lysate "TNL" vaccine comprised of sonicated 4T1 cells was developed, characterized and implemented for the prevention of triple-negative breast cancer. This study aimed to gain a better understanding of the immune response behind the success of the vaccine in vivo, through use of ex vivo and in vivo assays. Here, we analyze the activation of various immune cells isolated from healthy mouse spleens and find that antigen-presenting cells (APCs) such as dendritic cells (DCs) are being activated following 24 h incubation with 1:10 mg TNL/mg splenocytes. These cells were further explored to determine the pathway by which activation is occurring, and it was observed that TNL are phagocytosed by DCs to activate NF-kB and c-Fos pathways, resulting in enhanced cytokine release after 24 h. An in vivo temporal analysis was performed in mice to understand the immune response at 1, 3, 7 and 10 days after one 100 μL dose of TNL consisting of 10
    MeSH term(s) Animals ; Mice ; Leukocytes, Mononuclear ; Dendritic Cells ; Neoplasms/metabolism ; Immunity ; Vaccines ; Cancer Vaccines
    Chemical Substances Vaccines ; Cancer Vaccines
    Language English
    Publishing date 2023-12-12
    Publishing country Netherlands
    Document type Journal Article ; Research Support, U.S. Gov't, Non-P.H.S. ; Research Support, N.I.H., Extramural
    ZDB-ID 120142-6
    ISSN 1872-7905 ; 0022-1759
    ISSN (online) 1872-7905
    ISSN 0022-1759
    DOI 10.1016/j.jim.2023.113601
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  9. Article ; Online: Subjective effects as predictors of substance use disorders in a clinical sample: A longitudinal study.

    Gresko, Shelley A / Rieselbach, Maya / Corley, Robin P / Hopfer, Christian J / Stallings, Michael C / Hewitt, John K / Rhee, Soo Hyun

    Drug and alcohol dependence

    2023  Volume 249, Page(s) 110822

    Abstract: Background: The literature on the association between subjective effects (SEs; i.e., how an individual perceives their physiological and psychological reactions to a drug) and substance use disorders (SUDs) is largely limited to community samples. The ... ...

    Abstract Background: The literature on the association between subjective effects (SEs; i.e., how an individual perceives their physiological and psychological reactions to a drug) and substance use disorders (SUDs) is largely limited to community samples. The present study addressed the following aims in a clinical sample: whether SEs predict general versus substance-specific SUD in adolescence and adulthood after controlling for conduct disorder symptoms (CDsymp); whether SEs predict SUDs across drug classes; whether SEs predict change in SUD from adolescence to adulthood; and whether there are racial/ethnic differences in associations.
    Methods: Longitudinal analyses were conducted using data from a sample of 744 clinical probands recruited from residential and outpatient SUD treatment facilities in CO during adolescence (M
    Results: SEs assessed in adolescence robustly predicted general SUD for legal and illegal substances in adolescence and adulthood, whereas CDsymp predicted SUD primarily in adolescence. Higher positive and negative SEs in adolescence were associated with greater SUD severity after controlling for CDsymp, with similar magnitudes. Results indicated cross-substance effects of SEs on SUD. We found no evidence for racial/ethnic differences in associations.
    Conclusions: We investigated the progression of SUD in a high-risk sample with greater odds of sustained SUD. In contrast to CDsymp, both positive and negative SEs consistently predicted general SUD across substances in adolescence and adulthood.
    MeSH term(s) Adolescent ; Humans ; Longitudinal Studies ; Substance-Related Disorders/epidemiology ; Substance-Related Disorders/diagnosis ; Conduct Disorder
    Language English
    Publishing date 2023-06-09
    Publishing country Ireland
    Document type Journal Article
    ZDB-ID 519918-9
    ISSN 1879-0046 ; 0376-8716
    ISSN (online) 1879-0046
    ISSN 0376-8716
    DOI 10.1016/j.drugalcdep.2023.110822
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  10. Article ; Online: Moving Toward Diversity, Equity, and Inclusion: Barriers, Consequences, and Solutions.

    Orr, Colin J / Raphael, Jean L / Klein, Melissa / Corley, Alexandra M S / Tatem, Andria / Li, Su-Ting T / Pitt, Michael B / Gustafson, Sarah / Lopez, Michelle A

    Academic pediatrics

    2023  Volume 23, Issue 8, Page(s) 1524–1525

    Language English
    Publishing date 2023-08-03
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2483385-X
    ISSN 1876-2867 ; 1876-2859
    ISSN (online) 1876-2867
    ISSN 1876-2859
    DOI 10.1016/j.acap.2023.07.019
    Database MEDical Literature Analysis and Retrieval System OnLINE

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