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  1. Article ; Online: Modeling neurological disease using human stem cell-derived microglia-like cells transplanted into rodent brains.

    Jacob, Fadi / Bennett, Mariko L

    Lab animal

    2020  Volume 49, Issue 2, Page(s) 49–51

    MeSH term(s) Animals ; Disease Models, Animal ; Humans ; Mice ; Microglia/physiology ; Microglia/transplantation ; Stem Cell Transplantation ; Stem Cells/physiology
    Language English
    Publishing date 2020-01-07
    Publishing country United States
    Document type Journal Article ; Comment
    ISSN 1548-4475
    ISSN (online) 1548-4475
    DOI 10.1038/s41684-019-0465-9
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Cases from a busy nuclear cardiology laboratory.

    Girard, Andrew A / Elrod, Jacob / Bhambhvani, Pradeep / Hage, Fadi G

    Journal of nuclear cardiology : official publication of the American Society of Nuclear Cardiology

    2022  Volume 30, Issue 3, Page(s) 1103–1109

    MeSH term(s) Humans ; Cardiovascular System ; Cardiology ; Nuclear Medicine
    Language English
    Publishing date 2022-10-07
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1212505-2
    ISSN 1532-6551 ; 1071-3581
    ISSN (online) 1532-6551
    ISSN 1071-3581
    DOI 10.1007/s12350-022-03114-1
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Extracellular Vesicles of COVID-19 Patients Reflect Inflammation, Thrombogenicity, and Disease Severity.

    Aharon, Anat / Dangot, Ayelet / Kinaani, Fadi / Zavaro, Mor / Bannon, Lian / Bar-Lev, Tali / Keren-Politansky, Anat / Avivi, Irit / Jacob, Giris

    International journal of molecular sciences

    2023  Volume 24, Issue 6

    Abstract: Severe COVID-19 infections present with cytokine storms, hypercoagulation, and acute respiratory distress syndrome, with extracellular vesicles (EVs) being involved in coagulation and inflammation. This study aimed to determine whether coagulation ... ...

    Abstract Severe COVID-19 infections present with cytokine storms, hypercoagulation, and acute respiratory distress syndrome, with extracellular vesicles (EVs) being involved in coagulation and inflammation. This study aimed to determine whether coagulation profiles and EVs reflect COVID-19 disease severity. Thirty-six patients with symptomatic COVID-19 infection with mild/moderate/severe disease (12 in each group) were analyzed. Sixteen healthy individuals served as controls. Coagulation profiles and EV characteristics were tested by nanoparticle tracking analysis (NTA), flow cytometry, and Western blot. While coagulation factors VII, V, VIII, and vWF were comparable, significant differences were found in patients' D-Dimer/fibrinogen/free protein S levels compared to controls. Severe patients' EVs displayed higher percentages of small EVs (<150 nm) with increased expression of exosome marker CD63. Severe patients' EVs displayed high levels of platelet markers (CD41) and coagulation factors (tissue factor activity, endothelial protein C receptor). EVs of patients with moderate/severe disease expressed significantly higher levels of immune cell markers (CD4/CD8/CD14) and contained higher levels of IL-6. We demonstrated that EVs, but not the coagulation profile, may serve as biomarkers for COVID-19 severity. EVs demonstrated elevated levels of immune- and vascular-related markers in patients with moderate/severe disease, and may play a role in disease pathogenesis.
    MeSH term(s) Humans ; COVID-19/metabolism ; Extracellular Vesicles/metabolism ; Exosomes ; Biomarkers/metabolism ; Inflammation/metabolism ; Patient Acuity
    Chemical Substances Biomarkers
    Language English
    Publishing date 2023-03-21
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2019364-6
    ISSN 1422-0067 ; 1422-0067 ; 1661-6596
    ISSN (online) 1422-0067
    ISSN 1422-0067 ; 1661-6596
    DOI 10.3390/ijms24065918
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Extracellular Vesicles of COVID-19 Patients Reflect Inflammation, Thrombogenicity, and Disease Severity

    Anat Aharon / Ayelet Dangot / Fadi Kinaani / Mor Zavaro / Lian Bannon / Tali Bar-lev / Anat Keren-Politansky / Irit Avivi / Giris Jacob

    International Journal of Molecular Sciences, Vol 24, Iss 5918, p

    2023  Volume 5918

    Abstract: Severe COVID-19 infections present with cytokine storms, hypercoagulation, and acute respiratory distress syndrome, with extracellular vesicles (EVs) being involved in coagulation and inflammation. This study aimed to determine whether coagulation ... ...

    Abstract Severe COVID-19 infections present with cytokine storms, hypercoagulation, and acute respiratory distress syndrome, with extracellular vesicles (EVs) being involved in coagulation and inflammation. This study aimed to determine whether coagulation profiles and EVs reflect COVID-19 disease severity. Thirty-six patients with symptomatic COVID-19 infection with mild/moderate/severe disease (12 in each group) were analyzed. Sixteen healthy individuals served as controls. Coagulation profiles and EV characteristics were tested by nanoparticle tracking analysis (NTA), flow cytometry, and Western blot. While coagulation factors VII, V, VIII, and vWF were comparable, significant differences were found in patients’ D-Dimer/fibrinogen/free protein S levels compared to controls. Severe patients’ EVs displayed higher percentages of small EVs (<150 nm) with increased expression of exosome marker CD63. Severe patients’ EVs displayed high levels of platelet markers (CD41) and coagulation factors (tissue factor activity, endothelial protein C receptor). EVs of patients with moderate/severe disease expressed significantly higher levels of immune cell markers (CD4/CD8/CD14) and contained higher levels of IL-6. We demonstrated that EVs, but not the coagulation profile, may serve as biomarkers for COVID-19 severity. EVs demonstrated elevated levels of immune- and vascular-related markers in patients with moderate/severe disease, and may play a role in disease pathogenesis.
    Keywords COVID-19 ; extracellular vesicles (EVs) ; thrombogenicity ; inflammation ; Biology (General) ; QH301-705.5 ; Chemistry ; QD1-999
    Subject code 610
    Language English
    Publishing date 2023-03-01T00:00:00Z
    Publisher MDPI AG
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  5. Article ; Online: Generation and biobanking of patient-derived glioblastoma organoids and their application in CAR T cell testing.

    Jacob, Fadi / Ming, Guo-Li / Song, Hongjun

    Nature protocols

    2020  Volume 15, Issue 12, Page(s) 4000–4033

    Abstract: Glioblastoma tumors exhibit extensive inter- and intratumoral heterogeneity, which has contributed to the poor outcomes of numerous clinical trials and continues to complicate the development of effective therapeutic strategies. Most in vitro models do ... ...

    Abstract Glioblastoma tumors exhibit extensive inter- and intratumoral heterogeneity, which has contributed to the poor outcomes of numerous clinical trials and continues to complicate the development of effective therapeutic strategies. Most in vitro models do not preserve the cellular and mutational diversity of parent tumors and often require a lengthy generation time with variable efficiency. Here, we describe detailed procedures for generating glioblastoma organoids (GBOs) from surgically resected patient tumor tissue using a chemically defined medium without cell dissociation. By preserving cell-cell interactions and minimizing clonal selection, GBOs maintain the cellular heterogeneity of parent tumors. We include details of how to passage and cryopreserve GBOs for continued use, biobanking and long-term recovery. In addition, we describe procedures for investigating patient-specific responses to immunotherapies by co-culturing GBOs with chimeric antigen receptor (CAR) T cells. It takes ~2-4 weeks to generate GBOs and 5-7 d to perform CAR T cell co-culture using this protocol. Competence with human cell culture, tissue processing, immunohistology and microscopy is required for optimal results.
    MeSH term(s) Biological Specimen Banks ; Coculture Techniques ; Cryopreservation ; Glioblastoma/pathology ; Humans ; Organoids/immunology ; Organoids/pathology ; Receptors, Chimeric Antigen/metabolism ; T-Lymphocytes/cytology ; T-Lymphocytes/metabolism
    Chemical Substances Receptors, Chimeric Antigen
    Language English
    Publishing date 2020-11-09
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S.
    ZDB-ID 2244966-8
    ISSN 1750-2799 ; 1754-2189
    ISSN (online) 1750-2799
    ISSN 1754-2189
    DOI 10.1038/s41596-020-0402-9
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Building the brain from scratch: Engineering region-specific brain organoids from human stem cells to study neural development and disease.

    Jacob, Fadi / Schnoll, Jordan G / Song, Hongjun / Ming, Guo-Li

    Current topics in developmental biology

    2021  Volume 142, Page(s) 477–530

    Abstract: Human brain development is an intricate process that involves precisely timed coordination of cell proliferation, fate specification, neuronal differentiation, migration, and integration of diverse cell types. Understanding of these fundamental processes, ...

    Abstract Human brain development is an intricate process that involves precisely timed coordination of cell proliferation, fate specification, neuronal differentiation, migration, and integration of diverse cell types. Understanding of these fundamental processes, however, has been largely constrained by limited access to fetal brain tissue and the inability to prospectively study neurodevelopment in humans at the molecular, cellular and system levels. Although non-human model organisms have provided important insights into mechanisms underlying brain development, these systems do not fully recapitulate many human-specific features that often relate to disease. To address these challenges, human brain organoids, self-assembled three-dimensional neural aggregates, have been engineered from human pluripotent stem cells to model the architecture and cellular diversity of the developing human brain. Recent advancements in neural induction and regional patterning using small molecules and growth factors have yielded protocols for generating brain organoids that recapitulate the structure and neuronal composition of distinct brain regions. Here, we first provide an overview of early mammalian brain development with an emphasis on molecular cues that guide region specification. We then focus on recent efforts in generating human brain organoids that model the development of specific brain regions and highlight endeavors to enhance the cellular complexity to better mimic the in vivo developing human brain. We also provide examples of how organoid models have enhanced our understanding of human neurological diseases and conclude by discussing limitations of brain organoids with our perspectives on future advancements to maximize their potential.
    MeSH term(s) Brain ; Humans ; Organoids ; Stem Cells
    Language English
    Publishing date 2021-02-18
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ISSN 1557-8933 ; 0070-2153
    ISSN (online) 1557-8933
    ISSN 0070-2153
    DOI 10.1016/bs.ctdb.2020.12.011
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Superior orbital fissure narrowing and tumor-associated pain in spheno-orbital meningiomas.

    Zohdy, Youssef M / Jahangiri, Arman / Alawieh, Ali / Agam, Matthew / Cosgrove, Megan / Jacob, Fadi / Porto, Edoardo / Argaw, Samson A / Rodas, Alejandra / Maldonado, Justin / Chandler, Katherine E / Barbero, J Manuel Revuelta / De Andrade, Erion / Patel, Biren / Tariciotti, Leonardo / Vergara, Silivia / Pradilla, Gustavo / Garzon-Muvdi, Tomas

    Acta neurochirurgica

    2024  Volume 166, Issue 1, Page(s) 113

    Abstract: Introduction: Spheno-orbital meningiomas (SOMs) represent a distinct subtype of meningioma characterized by their unique multi-compartmental invasion pattern. Previous studies have investigated correlations between SOMs and visual manifestations. ... ...

    Abstract Introduction: Spheno-orbital meningiomas (SOMs) represent a distinct subtype of meningioma characterized by their unique multi-compartmental invasion pattern. Previous studies have investigated correlations between SOMs and visual manifestations. However, our comprehension of pain associated with SOMs remains limited. This study aims to provide insight into the pathophysiology underlying SOM-related pain through measurements of tumor volume and superior orbital fissure (SOF) narrowing.
    Methods: This retrospective study included patients who underwent surgical resection of a SOM between 2000 and 2022. Preoperative CT and/or MRI scans were analyzed, and the tumor volume of each segment was measured. Bony 3D reconstructions were used to measure the area of the SOF, and SOF narrowing was calculated.
    Results: The study cohort included 66 patients diagnosed with SOMs, among which 25.8% (n = 17) presented with pain. Postoperatively, 14/17 (82.4%) of patients reported pain improvement. There was no significant correlation between the total volume or the volume of tumor within each compartment and the presence of pain on presentation (p > 0.05). The median SOF narrowing was significantly different between patients presenting with and without tumor-associated pain with median of 11 mm
    Conclusion: While the exact cause of tumor-associated pain remains unclear, SOF narrowing seems to play a role in pain among SOM patients. Based on the radiological characteristics, SOF neurovascular decompression is recommended in SOM patients.
    MeSH term(s) Humans ; Cancer Pain ; Meningioma/complications ; Meningioma/diagnostic imaging ; Meningioma/surgery ; Retrospective Studies ; Pain ; Meningeal Neoplasms/complications ; Meningeal Neoplasms/diagnostic imaging ; Meningeal Neoplasms/surgery
    Language English
    Publishing date 2024-02-28
    Publishing country Austria
    Document type Journal Article
    ZDB-ID 80010-7
    ISSN 0942-0940 ; 0001-6268
    ISSN (online) 0942-0940
    ISSN 0001-6268
    DOI 10.1007/s00701-024-05979-2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Conference proceedings: Superior Orbital Fissure Narrowing and Tumor-Associated Pain in Spheno-orbital Meningiomas

    Zohdy, Youssef M. / Alawieh, Ali / Agam, Matthew / Jacob, Fadi / Rodas, Alejandra / Barbero, J. Manuel Revuelta / Argaw, Samson / Maldonado, Justin / Jahangiri, Arman / Chandler, Katherine / Barrow, Emily / Cosgrove, Megan / Porto, Edoardo / Pradilla, Gustavo / Garzon-Muvdi, Tomas

    Journal of Neurological Surgery Part B: Skull Base

    2024  Volume 85, Issue S 01

    Event/congress 33rd Annual Meeting North American Skull Base Society, Atlanta Marriott Marquis Atlanta, Georgia, United States, 2024-02-16
    Language English
    Publishing date 2024-02-01
    Publisher Georg Thieme Verlag KG
    Publishing place Stuttgart ; New York
    Document type Article ; Conference proceedings
    ZDB-ID 2654269-9
    ISSN 2193-634X ; 2193-6331
    ISSN (online) 2193-634X
    ISSN 2193-6331
    DOI 10.1055/s-0044-1779886
    Database Thieme publisher's database

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  9. Article ; Conference proceedings: Spheno-orbital Meningiomas: A Comprehensive Study on Prognostic Factors and a Novel Classification Approach

    Zohdy, Youssef M. / Jacob, Fadi / Agam, Matthew / Alawieh, Ali / Bray, David / Barbero, J. Manuel Revuelta / Argaw, Samson / Maldonado, Justin / Rodas, Alejandra / Sudhakar, Vivek / Porto, Edoardo / Jahangiri, Arman / Olson, Jeffery / Barrow, Emily / Pradilla, Gustavo / Garzon-Muvdi, Tomas

    Journal of Neurological Surgery Part B: Skull Base

    2024  Volume 85, Issue S 01

    Event/congress 33rd Annual Meeting North American Skull Base Society, Atlanta Marriott Marquis Atlanta, Georgia, United States, 2024-02-16
    Language English
    Publishing date 2024-02-01
    Publisher Georg Thieme Verlag KG
    Publishing place Stuttgart ; New York
    Document type Article ; Conference proceedings
    ZDB-ID 2654269-9
    ISSN 2193-634X ; 2193-6331
    ISSN (online) 2193-634X
    ISSN 2193-6331
    DOI 10.1055/s-0044-1779890
    Database Thieme publisher's database

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  10. Article ; Online: Robustness of Longitudinal Safety and Efficacy After Paclitaxel-Based Endovascular Therapy for Treatment of Femoro-Popliteal Artery Occlusive Disease: An Updated Systematic Review and Meta-Analysis of Randomized Controlled Trials.

    D'Oria, Mario / Mastrorilli, Davide / Secemsky, Eric / Behrendt, Christian-Alexander / Veraldi, Gianfranco / DeMartino, Randall / Mani, Kevin / Budtz-Lilly, Jacob / Scali, Salvatore / Saab, Fadi / Calvagna, Cristiano / Mezzetto, Luca / Ruaro, Barbara / Lepidi, Sandro

    Annals of vascular surgery

    2023  Volume 101, Page(s) 164–178

    Abstract: Background: The aims of this study were: i) to assess fragility indices (FIs) of individual randomized controlled trials (RCTs) that compared paclitaxel-based drug-coated balloons (DCBs) or drug-eluting stents (DESs) versus standard endovascular devices, ...

    Abstract Background: The aims of this study were: i) to assess fragility indices (FIs) of individual randomized controlled trials (RCTs) that compared paclitaxel-based drug-coated balloons (DCBs) or drug-eluting stents (DESs) versus standard endovascular devices, and ii) to meta-analyze mid-term and long-term safety and efficacy outcomes from available RCT data while also estimating the FI of pooled results.
    Methods: This systematic review has been registered in the PROSPERO public database (CRD42022304326 http://www.crd.york.ac.uk/PROSPERO). A query of PubMed (Medline), EMBASE (Excerpta Medical Database), Scopus, and CENTRAL (Cochrane Central Register of Controlled Trials) databases was performed to identify eligible RCTs. Rates of primary patency (PP) and target lesion revascularization (TLR) were assessed as efficacy outcomes, while lower limb amputation (LLA) consisting of major amputation that is. below or above the knee and all-cause mortality were estimated as safety outcomes. All outcomes were pooled with a random effects model to account for any clinical and study design heterogeneity. The analyses were performed by dividing the RCTs according to their maximal follow-up length (mid-term was defined as results up to 2-3 years, while long-term was defined as results up to 4-5 years). For each individual outcome, the FI and reverse fragility index (RFI) were calculated according to whether the outcome results were statistically significant or not, respectively. The fragility quotient (FQ) and reverse fragility quotient (RFQ), which are the FI or RFI divided by the sample size, were also calculated.
    Results: A total of 2,337 patients were included in the systematic review and meta-analysis. There were 2 RCTs examining DES devices and 14 RCTs evaluating different DCBs. For efficacy outcomes, there was evidence that paclitaxel-based endovascular therapy increased the PP rate and reduced the TLR rate at mid-term, with a calculated pooled risk ratio (RR) of 1.66 for patency (95% CI, 1.55-1.86; P < 0.001), with a corresponding number needed-to-treat (NNT) of 3 patients (95% CI, 2.9-3.8) and RR of 0.44 for TLR (95% CI, 0.35-0.54; P = 0.027), respectively. Similarly, there was evidence that paclitaxel-based endovascular therapy both increased PP and decreased TLR rates at long-term, with calculated pooled RR values of 1.73 (95% CI, 1.12-2.61; P = 0.004) and 0.53 (95% CI, 0.45-0.62; P = 0.82), respectively. For safety outcomes, there was evidence that paclitaxel-based endovascular therapy increased all-cause mortality at mid-term, with a calculated pooled RR of 2.05 (95% CI, 1.21-3.24). However, there was no difference between treatment arms in LLA at mid-term (95% CI, 0.1-2.7; P = 0.68). Similarly, neither all-cause mortality nor LLA at long-term differed between treatment arms, with a calculated pooled RR of 0.66, 1.02 (95% CI, 0.31-3.42) and 1.02 (95% CI, 0.30-5.21; P = 0.22), respectively. The pooled estimates of PP at mid-term were robust (FI = 28 and FQ = 1.9%) as were pooled rates of TLR (FI = 18 and FQ = 0.9%). However, when safety outcomes were analyzed, the robustness of the meta-analysis decreased significantly. In fact, the relationship between the use of paclitaxel-coated devices and all-cause mortality at mid-term showed very low robustness (FI = 4 and FQ = 0.2%). At 5 years, only the benefit of paclitaxel-based devices to reduce TLR remained robust, with an FI of 32 and an FQ of 3.1%.
    Conclusions: The data supporting clinical efficacy endpoints of RCTs that examined paclitaxel-based devices in the treatment of femoral-popliteal arterial occlusive disease were robust; however, the pooled safety endpoints were highly fragile and prone to bias due to loss of patient follow-up in the original studies. These findings should be considered in the ongoing debate concerning the safety of paclitaxel-based devices.
    MeSH term(s) Humans ; Popliteal Artery/diagnostic imaging ; Paclitaxel/adverse effects ; Treatment Outcome ; Peripheral Arterial Disease/diagnostic imaging ; Peripheral Arterial Disease/therapy ; Angioplasty, Balloon ; Randomized Controlled Trials as Topic ; Arterial Occlusive Diseases
    Chemical Substances Paclitaxel (P88XT4IS4D)
    Language English
    Publishing date 2023-12-26
    Publishing country Netherlands
    Document type Meta-Analysis ; Systematic Review ; Journal Article
    ZDB-ID 1027366-9
    ISSN 1615-5947 ; 0890-5096
    ISSN (online) 1615-5947
    ISSN 0890-5096
    DOI 10.1016/j.avsg.2023.11.024
    Database MEDical Literature Analysis and Retrieval System OnLINE

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