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  1. Article ; Online: A case report and literature analysis of spermatic cord aggressive fibromatosis: A rare locally invasive tumor.

    Liu, Hongquan / Li, Peng / Cui, Yuanshan / Liu, Chu

    Asian journal of surgery

    2023  Volume 46, Issue 11, Page(s) 4853–4854

    MeSH term(s) Male ; Humans ; Fibromatosis, Aggressive/pathology ; Spermatic Cord/pathology
    Language English
    Publishing date 2023-06-10
    Publishing country Netherlands
    Document type Case Reports ; Letter
    ZDB-ID 1068461-x
    ISSN 0219-3108 ; 1015-9584
    ISSN (online) 0219-3108
    ISSN 1015-9584
    DOI 10.1016/j.asjsur.2023.05.134
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: A Sensitive Technique Unravels the Kinetics of Activation and Trans-Cleavage of CRISPR-Cas Systems.

    Feng, Wei / Peng, Hanyong / Zhang, Hongquan / Weinfeld, Michael / Le, X Chris

    Angewandte Chemie (International ed. in English)

    2024  , Page(s) e202404069

    Abstract: Activation of the CRISPR-Cas13a system requires the formation of a crRNA-Cas13a ribonucleoprotein (RNP) complex and the binding of an RNA activator to the RNP. These two binding processes play a crucial role in the performance of the CRISPR-Cas13a system. ...

    Abstract Activation of the CRISPR-Cas13a system requires the formation of a crRNA-Cas13a ribonucleoprotein (RNP) complex and the binding of an RNA activator to the RNP. These two binding processes play a crucial role in the performance of the CRISPR-Cas13a system. However, the binding kinetics remain poorly understood, and a main challenge is the lack of a sensitive method for real-time measurements of the dynamically formed active CRISPR-Cas13a enzyme. We describe here a new method to study the binding kinetics and report the rate constants (k
    Language English
    Publishing date 2024-03-25
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 2011836-3
    ISSN 1521-3773 ; 1433-7851
    ISSN (online) 1521-3773
    ISSN 1433-7851
    DOI 10.1002/anie.202404069
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  3. Article: Metabolic profiling identifies the significance of caffeine metabolism in CKD.

    Guo, Xinghua / Peng, Hongquan / Liu, Peijia / Tang, Leile / Fang, Jia / Aoieong, Chiwa / Tou, Tou / Tsai, Tsungyang / Liu, Xun

    Frontiers in bioengineering and biotechnology

    2023  Volume 11, Page(s) 1006246

    Abstract: Background: ...

    Abstract Background:
    Language English
    Publishing date 2023-02-17
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2719493-0
    ISSN 2296-4185
    ISSN 2296-4185
    DOI 10.3389/fbioe.2023.1006246
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: In vitro SELEX and application of an African swine fever virus (ASFV) p30 protein specific aptamer.

    Hu, Changchun / Li, Shuo / Zhou, Jie / Wei, Dan / Liu, Xueying / Chen, Zhu / Peng, Hongquan / Liu, Xun / Deng, Yan

    Scientific reports

    2024  Volume 14, Issue 1, Page(s) 4078

    Abstract: The African swine fever virus (ASFV) has caused severe economic losses in the pig industry. To monitor ASFV spread, the p30 protein has been identified as an ideal infection marker due to its early and long-term expression during the ASFV infection ... ...

    Abstract The African swine fever virus (ASFV) has caused severe economic losses in the pig industry. To monitor ASFV spread, the p30 protein has been identified as an ideal infection marker due to its early and long-term expression during the ASFV infection period. Timely monitoring of ASFV p30 enables the detection of ASFV infection and assessment of disease progression. Aptamers are an outstanding substitute for antibodies to develop an efficient tool for ASFV p30 protein detection. In this study, a series of aptamer candidates were screened by in vitro magnetic bead-based systematic evolution of ligands by exponential enrichment (MB-SELEX). An aptamer (Atc-20) finally showed high specificity and affinity (K
    MeSH term(s) Animals ; African Swine Fever ; African Swine Fever Virus ; Antibodies, Viral ; Biosensing Techniques ; Oligonucleotides ; Swine ; Aptamers, Peptide/chemistry
    Chemical Substances Antibodies, Viral ; Oligonucleotides ; P30 protein, African Swine Fever Virus (148348-19-0) ; Aptamers, Peptide
    Language English
    Publishing date 2024-02-19
    Publishing country England
    Document type Journal Article
    ZDB-ID 2615211-3
    ISSN 2045-2322 ; 2045-2322
    ISSN (online) 2045-2322
    ISSN 2045-2322
    DOI 10.1038/s41598-024-53619-7
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  5. Article: A normative modeling approach to quantify white matter changes and predict functional outcomes in stroke patients.

    Su, Houming / Yan, Su / Zhu, Hongquan / Liu, Yufei / Zhang, Guiling / Peng, Xiaolong / Zhang, Shun / Li, Yuanhao / Zhu, Wenzhen

    Frontiers in neuroscience

    2024  Volume 18, Page(s) 1334508

    Abstract: Objectives: The diverse nature of stroke necessitates individualized assessment, presenting challenges to case-control neuroimaging studies. The normative model, measuring deviations from a normal distribution, provides a solution. We aim to evaluate ... ...

    Abstract Objectives: The diverse nature of stroke necessitates individualized assessment, presenting challenges to case-control neuroimaging studies. The normative model, measuring deviations from a normal distribution, provides a solution. We aim to evaluate stroke-induced white matter microstructural abnormalities at group and individual levels and identify potential prognostic biomarkers.
    Methods: Forty-six basal ganglia stroke patients and 46 healthy controls were recruited. Diffusion-weighted imaging and clinical assessment were performed within 7 days after stroke. We used automated fiber quantification to characterize intergroup alterations of segmental diffusion properties along 20 fiber tracts. Then each patient was compared to normative reference (46 healthy participants) by Mahalanobis distance tractometry for 7 significant fiber tracts. Mahalanobis distance-based deviation loads (MaDDLs) and fused MaDDL
    Results: Disrupted microstructural integrity was observed across the left corticospinal tract, bilateral inferior fronto-occipital fasciculus, left inferior longitudinal fasciculus, bilateral thalamic radiation, and right uncinate fasciculus. The correlation coefficients between MaDDL metrics and initial functional impairment ranged from 0.364 to 0.618 (
    Conclusion: MaDDL
    Language English
    Publishing date 2024-02-05
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2411902-7
    ISSN 1662-453X ; 1662-4548
    ISSN (online) 1662-453X
    ISSN 1662-4548
    DOI 10.3389/fnins.2024.1334508
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  6. Article ; Online: A familial case of basophilic stippling cells in lead poisoning.

    Chen, Xinmin / Jiang, Fangfei / Liang, Hua / Peng, Huan / Chen, Yao / Luo, Hongquan

    International journal of laboratory hematology

    2021  Volume 43, Issue 6, Page(s) e298–e299

    MeSH term(s) Basophils/pathology ; Bone Marrow/pathology ; Child, Preschool ; Erythrocytes/pathology ; Humans ; Lead Poisoning/blood ; Lead Poisoning/pathology ; Male
    Language English
    Publishing date 2021-06-01
    Publishing country England
    Document type Case Reports ; Letter
    ZDB-ID 2268590-X
    ISSN 1751-553X ; 1751-5521 ; 0141-9854
    ISSN (online) 1751-553X
    ISSN 1751-5521 ; 0141-9854
    DOI 10.1111/ijlh.13614
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  7. Article ; Online: Clinical significance of PAX5 in lung adenocarcinoma and its role in cell proliferation and metastasis.

    Wang, Xin / Sun, Hongquan / Song, Haiping / Sun, Weihong / Zhao, Peng / Zhang, Tao / Ma, Xuezhen

    Panminerva medica

    2020  

    Language English
    Publishing date 2020-03-30
    Publishing country Italy
    Document type Journal Article
    ZDB-ID 123572-2
    ISSN 1827-1898 ; 0031-0808
    ISSN (online) 1827-1898
    ISSN 0031-0808
    DOI 10.23736/S0031-0808.20.03887-2
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  8. Article ; Online: Engineering a Programmed Death-Ligand 1-Targeting Monobody Via Directed Evolution for SynNotch-Gated Cell Therapy.

    Zhu, Linshan / Man, Chi-Wei / Harrison, Reed E S / Wu, Zhuohang / Limsakul, Praopim / Peng, Qin / Hashimoto, Matthew / Mamaril, Anthony P / Xu, Hongquan / Liu, Longwei / Wang, Yingxiao

    ACS nano

    2024  Volume 18, Issue 11, Page(s) 8531–8545

    Abstract: Programmed death-ligand 1 (PD-L1) is a promising target for cancer immunotherapy due to its ability to inhibit T cell activation; however, its expression on various noncancer cells may cause on-target off-tumor toxicity when designing PD-L1-targeting ... ...

    Abstract Programmed death-ligand 1 (PD-L1) is a promising target for cancer immunotherapy due to its ability to inhibit T cell activation; however, its expression on various noncancer cells may cause on-target off-tumor toxicity when designing PD-L1-targeting Chimeric Antigen Receptor (CAR) T cell therapies. Combining rational design and directed evolution of the human fibronectin-derived monobody scaffold, "PDbody" was engineered to bind to PD-L1 with a preference for a slightly lower pH, which is typical in the tumor microenvironment. PDbody was further utilized as a CAR to target the PD-L1-expressing triple negative MDA-MB-231 breast cancer cell line. To mitigate on-target off-tumor toxicity associated with targeting PD-L1, a Cluster of Differentiation 19 (CD19)-recognizing SynNotch IF THEN gate was integrated into the system. This CD19-SynNotch PDbody-CAR system was then expressed in primary human T cells to target CD19-expressing MDA-MB-231 cancer cells. These CD19-SynNotch PDbody-CAR T cells demonstrated both specificity and efficacy
    MeSH term(s) Humans ; Mice ; Animals ; Receptors, Antigen, T-Cell/metabolism ; B7-H1 Antigen/genetics ; B7-H1 Antigen/metabolism ; Ligands ; Cell Line, Tumor ; T-Lymphocytes ; Immunotherapy, Adoptive
    Chemical Substances Receptors, Antigen, T-Cell ; B7-H1 Antigen ; Ligands
    Language English
    Publishing date 2024-03-08
    Publishing country United States
    Document type Journal Article
    ISSN 1936-086X
    ISSN (online) 1936-086X
    DOI 10.1021/acsnano.4c01597
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  9. Article ; Online: Ultrasensitive Electrochemical Aptasensing of Malathion Based on Hydroxylated Black Phosphorus/Poly-L-Lysine Composite.

    Ma, Tingting / Zhou, Jie / Wei, Dan / Peng, Hongquan / Liu, Xun / Guo, Wenfei / Zhang, Chuanxiang / Liu, Xueying / Li, Song / Deng, Yan

    Biosensors

    2023  Volume 13, Issue 7

    Abstract: A highly sensitive unlabeled electrochemical aptasensor based on hydroxylated black phosphorus/poly-L-lysine (hBP/PLL) composite is introduced herein for the detection of malathion. Poly-L-lysine (PLL) with adhesion and coating properties adhere to the ... ...

    Abstract A highly sensitive unlabeled electrochemical aptasensor based on hydroxylated black phosphorus/poly-L-lysine (hBP/PLL) composite is introduced herein for the detection of malathion. Poly-L-lysine (PLL) with adhesion and coating properties adhere to the surface of the nanosheets by noncovalent interactions with underlying hydroxylated black phosphorus nanosheets (hBP) to produce the hBP/PLL composite. The as-synthesized hBP/PLL composite bonded to Au nanoparticles (Au NPs) firmly by assembling and using them as a substrate for the aptamer with high specificity as a probe to fabricate the sensor. Under optimal conditions, the linear range of the electrochemical aptasensor was 0.1 pM~1 μM, and the detection limit was 2.805 fM. The electrochemical aptasensor has great selectivity, a low detection limit, and anti-interference, which has potential application prospects in the field of rapid trace detection of pesticide residues.
    MeSH term(s) Metal Nanoparticles/chemistry ; Malathion ; Polylysine ; Electrochemical Techniques ; Gold/chemistry ; Phosphorus ; Aptamers, Nucleotide/chemistry ; Limit of Detection ; Biosensing Techniques
    Chemical Substances Malathion (U5N7SU872W) ; Polylysine (25104-18-1) ; Gold (7440-57-5) ; Phosphorus (27YLU75U4W) ; Aptamers, Nucleotide
    Language English
    Publishing date 2023-07-16
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2662125-3
    ISSN 2079-6374 ; 2079-6374
    ISSN (online) 2079-6374
    ISSN 2079-6374
    DOI 10.3390/bios13070735
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  10. Article ; Online: Metabolic implications of amino acid metabolites in chronic kidney disease progression: a metabolomics analysis using OPLS-DA and MBRole2.0 database.

    Kang, Jianhao / Guo, Xinghua / Peng, Hongquan / Deng, Ying / Lai, Jiahui / Tang, Leile / Aoieong, Chiwa / Tou, Tou / Tsai, Tsungyang / Liu, Xun

    International urology and nephrology

    2023  Volume 56, Issue 3, Page(s) 1173–1184

    Abstract: Background: As chronic kidney disease (CKD) progresses, metabolites undergo diverse transformations. Nevertheless, the impact of these metabolic changes on the etiology, progression, and prognosis of CKD remains uncertain. Our objective is to conduct a ... ...

    Abstract Background: As chronic kidney disease (CKD) progresses, metabolites undergo diverse transformations. Nevertheless, the impact of these metabolic changes on the etiology, progression, and prognosis of CKD remains uncertain. Our objective is to conduct a metabolomics analysis to scrutinize metabolites and identify significant metabolic pathways implicated in CKD progression, thereby pinpointing potential therapeutic targets for CKD management.
    Methods: We recruited 145 patients with CKD and determined their mGFR by measuring the plasma iohexol clearance, whereupon we partitioned them into four groups based on their mGFR values. Non-targeted metabolomics analysis was conducted using UPLC-MS/MS assays. Differential metabolites were identified via one-way ANOVA, PCA, PLS-DA, and OPLS-DA analyses employing the MetaboAnalyst 5.0 platform. Ultimately, we performed differential metabolite pathway enrichment analysis, using both the MetaboAnalyst 5.0 platform and the MBRole2.0 database.
    Results: According to the findings of the MBRole2.0 and MetaboAnalyst 5.0 enrichment analysis, six amino acid metabolism pathways were discovered to have significant roles in the progression of CKD, with the glycine, serine, and threonine metabolism pathway being the most prominent. The latter enriched 14 differential metabolites, of which six decreased while two increased concomitantly with renal function deterioration.
    Conclusions: The metabolic analysis unveiled that glycine, serine, and threonine metabolism plays a pivotal role in the progression of CKD. Specifically, glycine was found to increase while serine decreased with the deterioration of CKD.
    MeSH term(s) Humans ; Chromatography, Liquid ; Amino Acids ; Tandem Mass Spectrometry ; Metabolomics ; Renal Insufficiency, Chronic ; Glycine ; Serine ; Threonine ; Biomarkers
    Chemical Substances Amino Acids ; Glycine (TE7660XO1C) ; Serine (452VLY9402) ; Threonine (2ZD004190S) ; Biomarkers
    Language English
    Publishing date 2023-09-20
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 204048-7
    ISSN 1573-2584 ; 0301-1623 ; 0042-1162
    ISSN (online) 1573-2584
    ISSN 0301-1623 ; 0042-1162
    DOI 10.1007/s11255-023-03779-8
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