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  1. Article: Astrocytic CREB in nucleus accumbens promotes susceptibility to chronic stress.

    Holt, Leanne M / Gyles, Trevonn M / Parise, Eric M / Minier-Toribio, Angelica / Markovic, Tamara / Rivera, Matthew / Yeh, Szu-Ying / Nestler, Eric J

    bioRxiv : the preprint server for biology

    2024  

    Abstract: Background: Increasing evidence implicates astrocytes in stress and depression in both rodent models and human Major Depressive Disorder (MDD). Despite this, little is known about the transcriptional responses to stress of astrocytes within the nucleus ... ...

    Abstract Background: Increasing evidence implicates astrocytes in stress and depression in both rodent models and human Major Depressive Disorder (MDD). Despite this, little is known about the transcriptional responses to stress of astrocytes within the nucleus accumbens (NAc), a key brain reward region, and their influence on behavioral outcomes.
    Methods: We used whole cell sorting, RNA-sequencing, and bioinformatic analyses to investigate the NAc astrocyte transcriptome in male mice in response to chronic social defeat stress (CSDS). Immunohistochemistry was used to determine stress-induced changes in astrocytic CREB within the NAc. Finally, astrocytic regulation of depression-like behavior was investigated using viral-mediated manipulation of CREB in combination with CSDS.
    Results: We found a robust transcriptional response in NAc astrocytes to CSDS in stressed mice, with changes seen in both stress-susceptible and stress-resilient animals. Bioinformatic analysis revealed CREB, a transcription factor widely studied in neurons, as one of the top-predicted upstream regulators of the NAc astrocyte transcriptome, with opposite activation states seen in resilient versus susceptible mice. This bioinformatic result was confirmed at the protein level with immunohistochemistry. Viral overexpression of CREB selectively in NAc astrocytes promoted susceptibility to chronic stress.
    Conclusions: Together, our data demonstrate that the astrocyte transcriptome responds robustly to CSDS and, for the first time, that transcriptional regulation in astrocytes contributes to depressive-like behaviors. A better understanding of transcriptional regulation in astrocytes may reveal unknown molecular mechanisms underlying neuropsychiatric disorders.
    Language English
    Publishing date 2024-01-16
    Publishing country United States
    Document type Preprint
    DOI 10.1101/2024.01.15.575728
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Integrating genetics and transcriptomics to study major depressive disorder: a conceptual framework, bioinformatic approaches, and recent findings.

    Hicks, Emily M / Seah, Carina / Cote, Alanna / Marchese, Shelby / Brennand, Kristen J / Nestler, Eric J / Girgenti, Matthew J / Huckins, Laura M

    Translational psychiatry

    2023  Volume 13, Issue 1, Page(s) 129

    Abstract: Major depressive disorder (MDD) is a complex and heterogeneous psychiatric syndrome with genetic and environmental influences. In addition to neuroanatomical and circuit-level disturbances, dysregulation of the brain transcriptome is a key phenotypic ... ...

    Abstract Major depressive disorder (MDD) is a complex and heterogeneous psychiatric syndrome with genetic and environmental influences. In addition to neuroanatomical and circuit-level disturbances, dysregulation of the brain transcriptome is a key phenotypic signature of MDD. Postmortem brain gene expression data are uniquely valuable resources for identifying this signature and key genomic drivers in human depression; however, the scarcity of brain tissue limits our capacity to observe the dynamic transcriptional landscape of MDD. It is therefore crucial to explore and integrate depression and stress transcriptomic data from numerous, complementary perspectives to construct a richer understanding of the pathophysiology of depression. In this review, we discuss multiple approaches for exploring the brain transcriptome reflecting dynamic stages of MDD: predisposition, onset, and illness. We next highlight bioinformatic approaches for hypothesis-free, genome-wide analyses of genomic and transcriptomic data and their integration. Last, we summarize the findings of recent genetic and transcriptomic studies within this conceptual framework.
    MeSH term(s) Humans ; Depressive Disorder, Major ; Transcriptome ; Genome-Wide Association Study ; Brain/metabolism ; Computational Biology ; Genetic Predisposition to Disease
    Language English
    Publishing date 2023-04-19
    Publishing country United States
    Document type Journal Article ; Review
    ZDB-ID 2609311-X
    ISSN 2158-3188 ; 2158-3188
    ISSN (online) 2158-3188
    ISSN 2158-3188
    DOI 10.1038/s41398-023-02412-7
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Author Correction: Oxycodone withdrawal induces HDAC1/HDAC2-dependent transcriptional maladaptations in the reward pathway in a mouse model of peripheral nerve injury.

    Pryce, Kerri D / Serafini, Randal A / Ramakrishnan, Aarthi / Nicolais, Andrew / Giosan, Ilinca M / Polizu, Claire / Torres-Berrío, Angélica / Vuppala, Sreeya / Kronman, Hope / Ruiz, Anne / Gaspari, Sevasti / Peña, Catherine J / Sakloth, Farhana / Mitsi, Vasiliki / van Duzer, John / Mazitschek, Ralph / Jarpe, Matthew / Shen, Li / Nestler, Eric J /
    Zachariou, Venetia

    Nature neuroscience

    2024  Volume 27, Issue 2, Page(s) 384

    Language English
    Publishing date 2024-01-22
    Publishing country United States
    Document type Published Erratum
    ZDB-ID 1420596-8
    ISSN 1546-1726 ; 1097-6256
    ISSN (online) 1546-1726
    ISSN 1097-6256
    DOI 10.1038/s41593-024-01579-6
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Sex-Specific Regulation of Stress Susceptibility by the Astrocytic Gene

    Parise, Eric M / Gyles, Trevonn M / Godino, Arthur / Sial, Omar K / Browne, Caleb J / Parise, Lyonna F / Torres-Berrío, Angélica / Salery, Marine / Durand-de Cuttoli, Romain / Rivera, Matthew T / Cardona-Acosta, Astrid M / Holt, Leanne / Markovic, Tamara / van der Zee, Yentl Y / Lorsch, Zachary S / Cathomas, Flurin / Garon, Juliet B / Teague, Collin / Issler, Orna /
    Hamilton, Peter J / Bolaños-Guzmán, Carlos A / Russo, Scott J / Nestler, Eric J

    bioRxiv : the preprint server for biology

    2024  

    Abstract: Major depressive disorder (MDD) is linked to impaired structural and synaptic plasticity in limbic brain regions. Astrocytes, which regulate synapses and are influenced by chronic stress, likely contribute to these changes. We analyzed astrocyte gene ... ...

    Abstract Major depressive disorder (MDD) is linked to impaired structural and synaptic plasticity in limbic brain regions. Astrocytes, which regulate synapses and are influenced by chronic stress, likely contribute to these changes. We analyzed astrocyte gene profiles in the nucleus accumbens (NAc) of humans with MDD and mice exposed to chronic stress.
    Language English
    Publishing date 2024-04-15
    Publishing country United States
    Document type Preprint
    DOI 10.1101/2024.04.12.588724
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Circulating myeloid-derived MMP8 in stress susceptibility and depression.

    Cathomas, Flurin / Lin, Hsiao-Yun / Chan, Kenny L / Li, Long / Parise, Lyonna F / Alvarez, Johana / Durand-de Cuttoli, Romain / Aubry, Antonio V / Muhareb, Samer / Desland, Fiona / Shimo, Yusuke / Ramakrishnan, Aarthi / Estill, Molly / Ferrer-Pérez, Carmen / Parise, Eric M / Wilk, C Matthias / Kaster, Manuella P / Wang, Jun / Sowa, Allison /
    Janssen, William G / Costi, Sara / Rahman, Adeeb / Fernandez, Nicolas / Campbell, Matthew / Swirski, Filip K / Nestler, Eric J / Shen, Li / Merad, Miriam / Murrough, James W / Russo, Scott J

    Nature

    2024  Volume 626, Issue 8001, Page(s) 1108–1115

    Abstract: Psychosocial stress has profound effects on the body, including the immune system and the ... ...

    Abstract Psychosocial stress has profound effects on the body, including the immune system and the brain
    MeSH term(s) Animals ; Humans ; Mice ; Depressive Disorder, Major/blood ; Depressive Disorder, Major/enzymology ; Depressive Disorder, Major/genetics ; Depressive Disorder, Major/metabolism ; Extracellular Space/metabolism ; Matrix Metalloproteinase 8/blood ; Matrix Metalloproteinase 8/deficiency ; Matrix Metalloproteinase 8/genetics ; Matrix Metalloproteinase 8/metabolism ; Mice, Inbred C57BL ; Monocytes/chemistry ; Monocytes/immunology ; Monocytes/metabolism ; Nucleus Accumbens/metabolism ; Nucleus Accumbens/pathology ; Parenchymal Tissue/metabolism ; Single-Cell Gene Expression Analysis ; Social Behavior ; Social Isolation ; Stress, Psychological/blood ; Stress, Psychological/genetics ; Stress, Psychological/immunology ; Stress, Psychological/metabolism
    Chemical Substances Matrix Metalloproteinase 8 (EC 3.4.24.34) ; MMP8 protein, human (EC 3.4.24.34) ; MMP8 protein, mouse (EC 3.4.24.34)
    Language English
    Publishing date 2024-02-07
    Publishing country England
    Document type Journal Article
    ZDB-ID 120714-3
    ISSN 1476-4687 ; 0028-0836
    ISSN (online) 1476-4687
    ISSN 0028-0836
    DOI 10.1038/s41586-023-07015-2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Oxycodone withdrawal induces HDAC1/HDAC2-dependent transcriptional maladaptations in the reward pathway in a mouse model of peripheral nerve injury.

    Pryce, Kerri D / Serafini, Randal A / Ramakrishnan, Aarthi / Nicolais, Andrew / Giosan, Ilinca M / Polizu, Claire / Torres-Berrío, Angélica / Vuppala, Sreeya / Kronman, Hope / Ruiz, Anne / Gaspari, Sevasti / Peña, Catherine J / Sakloth, Farhana / Mitsi, Vasiliki / van Duzer, John / Mazitschek, Ralph / Jarpe, Matthew / Shen, Li / Nestler, Eric J /
    Zachariou, Venetia

    Nature neuroscience

    2023  Volume 26, Issue 7, Page(s) 1229–1244

    Abstract: The development of physical dependence and addiction disorders due to misuse of opioid analgesics is a major concern with pain therapeutics. We developed a mouse model of oxycodone exposure and subsequent withdrawal in the presence or absence of chronic ... ...

    Abstract The development of physical dependence and addiction disorders due to misuse of opioid analgesics is a major concern with pain therapeutics. We developed a mouse model of oxycodone exposure and subsequent withdrawal in the presence or absence of chronic neuropathic pain. Oxycodone withdrawal alone triggered robust gene expression adaptations in the nucleus accumbens, medial prefrontal cortex and ventral tegmental area, with numerous genes and pathways selectively affected by oxycodone withdrawal in mice with peripheral nerve injury. Pathway analysis predicted that histone deacetylase (HDAC) 1 is a top upstream regulator in opioid withdrawal in nucleus accumbens and medial prefrontal cortex. The novel HDAC1/HDAC2 inhibitor, Regenacy Brain Class I HDAC Inhibitor (RBC1HI), attenuated behavioral manifestations of oxycodone withdrawal, especially in mice with neuropathic pain. These findings suggest that inhibition of HDAC1/HDAC2 may provide an avenue for patients with chronic pain who are dependent on opioids to transition to non-opioid analgesics.
    MeSH term(s) Mice ; Animals ; Oxycodone/pharmacology ; Peripheral Nerve Injuries ; Narcotics ; Histone Deacetylase 1/metabolism ; Neuralgia ; Reward ; Analgesics, Opioid/pharmacology ; Histone Deacetylase 2/metabolism
    Chemical Substances Oxycodone (CD35PMG570) ; Narcotics ; Histone Deacetylase 1 (EC 3.5.1.98) ; Analgesics, Opioid ; Histone Deacetylase 2 (EC 3.5.1.98)
    Language English
    Publishing date 2023-06-08
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 1420596-8
    ISSN 1546-1726 ; 1097-6256
    ISSN (online) 1546-1726
    ISSN 1097-6256
    DOI 10.1038/s41593-023-01350-3
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Impact of COVID-19 on pneumonia-focused antibiotic use at an academic medical center.

    Nestler, Matthew J / Godbout, Emily / Lee, Kimberly / Kim, Jihye / Noda, Andrew J / Taylor, Perry / Pryor, Rachel / Markley, J Daniel / Doll, Michelle / Bearman, Gonzalo / Stevens, Michael P

    Infection control and hospital epidemiology

    2020  Volume 42, Issue 7, Page(s) 915–916

    MeSH term(s) Academic Medical Centers ; Anti-Bacterial Agents/therapeutic use ; COVID-19 ; Humans ; Pneumonia/drug therapy ; SARS-CoV-2
    Chemical Substances Anti-Bacterial Agents
    Keywords covid19
    Language English
    Publishing date 2020-07-23
    Publishing country United States
    Document type Letter ; Comment
    ZDB-ID 639378-0
    ISSN 1559-6834 ; 0195-9417 ; 0899-823X
    ISSN (online) 1559-6834
    ISSN 0195-9417 ; 0899-823X
    DOI 10.1017/ice.2020.362
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Fungal superinfection in patients with COVID-19: Role of antifungal stewardship?

    Nestler, Matthew / Godbout, Emily / Lee, Kimberly / Kim, Jihye / Noda, Andrew J / Taylor, Perry / Pryor, Rachel / Markley, John Daniel / Doll, Michelle / Bearman, Gonzalo / Stevens, Michael P

    American journal of infection control

    2020  Volume 49, Issue 2, Page(s) 279–280

    MeSH term(s) Antifungal Agents/therapeutic use ; Antimicrobial Stewardship/trends ; COVID-19/drug therapy ; COVID-19/microbiology ; Humans ; Mycoses/drug therapy ; Mycoses/microbiology ; SARS-CoV-2 ; Superinfection/drug therapy ; Superinfection/microbiology
    Chemical Substances Antifungal Agents
    Keywords covid19
    Language English
    Publishing date 2020-11-19
    Publishing country United States
    Document type Journal Article
    ZDB-ID 392362-9
    ISSN 1527-3296 ; 0196-6553
    ISSN (online) 1527-3296
    ISSN 0196-6553
    DOI 10.1016/j.ajic.2020.11.015
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Analysis of the Five Unimolecular Reaction Pathways of CD

    Brown, Timothy M / Gillespie, Blanton R / Smith, Caleb A / Nestler, Matthew J / Heard, George L / Setser, D W / Holmes, Bert E

    The journal of physical chemistry. A

    2018  Volume 122, Issue 43, Page(s) 8446–8457

    Abstract: The five unimolecular HX and DX (X = F, Cl) elimination pathways of ... ...

    Abstract The five unimolecular HX and DX (X = F, Cl) elimination pathways of CD
    Language English
    Publishing date 2018-10-18
    Publishing country United States
    Document type Journal Article
    ISSN 1520-5215
    ISSN (online) 1520-5215
    DOI 10.1021/acs.jpca.8b06680
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: The long noncoding RNA FEDORA is a cell type- and sex-specific regulator of depression.

    Issler, Orna / van der Zee, Yentl Y / Ramakrishnan, Aarthi / Xia, Sunhui / Zinsmaier, Alexander K / Tan, Chunfeng / Li, Wei / Browne, Caleb J / Walker, Deena M / Salery, Marine / Torres-Berrío, Angélica / Futamura, Rita / Duffy, Julia E / Labonte, Benoit / Girgenti, Matthew J / Tamminga, Carol A / Dupree, Jeffrey L / Dong, Yan / Murrough, James W /
    Shen, Li / Nestler, Eric J

    Science advances

    2022  Volume 8, Issue 48, Page(s) eabn9494

    Abstract: Women suffer from depression at twice the rate of men, but the underlying molecular mechanisms are poorly understood. Here, we identify marked baseline sex differences in the expression of long noncoding RNAs (lncRNAs), a class of regulatory transcripts, ...

    Abstract Women suffer from depression at twice the rate of men, but the underlying molecular mechanisms are poorly understood. Here, we identify marked baseline sex differences in the expression of long noncoding RNAs (lncRNAs), a class of regulatory transcripts, in human postmortem brain tissue that are profoundly lost in depression. One such human lncRNA, RP11-298D21.1 (which we termed FEDORA), is enriched in oligodendrocytes and neurons and up-regulated in the prefrontal cortex (PFC) of depressed females only. We found that virally expressing FEDORA selectively either in neurons or in oligodendrocytes of PFC promoted depression-like behavioral abnormalities in female mice only, changes associated with cell type-specific regulation of synaptic properties, myelin thickness, and gene expression. We also found that blood FEDORA levels have diagnostic implications for depressed women and are associated with clinical response to ketamine. These findings demonstrate the important role played by lncRNAs, and FEDORA in particular, in shaping the sex-specific landscape of the brain and contributing to sex differences in depression.
    Language English
    Publishing date 2022-11-30
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2810933-8
    ISSN 2375-2548 ; 2375-2548
    ISSN (online) 2375-2548
    ISSN 2375-2548
    DOI 10.1126/sciadv.abn9494
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