Article ; Online: In Situ Proximity Ligation Assay to Visualize Protein-Protein Interactions in Tumor Specimens.
Methods in molecular biology (Clifton, N.J.)
2023 Volume 2660, Page(s) 123–135
Abstract: Protein-protein interactions (PPI) are the basis of various biological phenomena, such as intracellular signal transduction, gene transcription, and metabolism. PPI are also considered to be involved in the pathogenesis and development of various ... ...
Abstract | Protein-protein interactions (PPI) are the basis of various biological phenomena, such as intracellular signal transduction, gene transcription, and metabolism. PPI are also considered to be involved in the pathogenesis and development of various diseases, including cancer. PPI phenomenon and their functions have been elucidated by gene transfection and molecular detection technologies. On the other hand, in histopathological analysis, although immunohistochemical analyses provide information pertaining to protein expression and their localization in pathophysiological tissues, it has been difficult to visualize the PPI of these proteins. An in situ proximity ligation assay (PLA) was developed as a microscopic visualization technique for PPI in formalin-fixed, paraffin-embedded (FFPE) tissues as well as in cultured cells and frozen tissues. PLA using histopathological specimens enables cohort studies of PPI, which can clarify the significance of PPI in pathology. We have previously shown the dimerization pattern of estrogen receptors and significance of HER2-binding proteins using breast cancer FFPE tissues. In this chapter, we describe a methodology for the visualization of PPI using PLA in pathological specimens. |
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MeSH term(s) | Female ; Humans ; Breast Neoplasms/metabolism ; Cohort Studies ; Formaldehyde/metabolism ; Paraffin Embedding ; Protein Interaction Mapping/methods ; Protein Interaction Maps ; Receptors, Estrogen/metabolism ; Signal Transduction ; Tissue Fixation/methods ; Fluorescent Dyes ; Antibodies ; Cell Nucleus |
Chemical Substances | ERBB2 protein, human (EC 2.7.10.1) ; Formaldehyde (1HG84L3525) ; Receptors, Estrogen ; Fluorescent Dyes ; Antibodies |
Language | English |
Publishing date | 2023-05-16 |
Publishing country | United States |
Document type | Journal Article |
ISSN | 1940-6029 |
ISSN (online) | 1940-6029 |
DOI | 10.1007/978-1-0716-3163-8_9 |
Database | MEDical Literature Analysis and Retrieval System OnLINE |
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