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  1. Article: Prognostic Value of the Red Blood Cell Distribution Width-to-Albumin Ratio in Critically Ill Older Patients with Acute Kidney Injury: A Retrospective Database Study.

    Guo, Lei / Chen, Dezhun / Cheng, Bihuan / Gong, Yuqiang / Wang, Benji

    Emergency medicine international

    2023  Volume 2023, Page(s) 3591243

    Abstract: Background: There is no evidence suggesting that red blood cell distribution width-to-albumin ratio (RA) predicts outcomes in severely ill older individuals with acute kidney injury (AKI). We hypothesized that RA is associated with all-cause mortality ... ...

    Abstract Background: There is no evidence suggesting that red blood cell distribution width-to-albumin ratio (RA) predicts outcomes in severely ill older individuals with acute kidney injury (AKI). We hypothesized that RA is associated with all-cause mortality in critically ill older patients with AKI.
    Methods: We recorded demographics, laboratory tests, comorbidities, vital signs, and other clinical information from the MIMIC-III V1.4 dataset. The primary endpoint was 90-day all-cause mortality, and the secondary endpoints were 30-day mortality, one-year mortality, renal replacement treatment (RRT), duration of stay in the intensive care unit (ICU), sepsis, and septic shock. We generated Cox proportional hazards and logistic regression models to determine RA's prognostic values and subgroup analyses to determine the subgroups' mortality. We conducted a Pearson correlation analysis on RA and C-reactive protein (CRP) in the cohort of patients from the Second Affiliated Hospital of Wenzhou Medical University.
    Results: A total of 6,361 patients were extracted from MIMIC-III based on the inclusion and exclusion criteria. RA levels directly and linearly correlated with 90-day all-cause mortality. After controlling for ethnicity, gender, age, and other confounding variables in multivariate analysis, higher RA was significantly associated with an increased risk of 30-day, 90-day, and one-year all-cause mortality as opposed to the reduced levels of RA (tertile 3 vs. tertile 1: hazard ratios (HRs), 95% confidence intervals (CIs): 1.70, 1.43-2.01; 1.90, 1.64-2.19; and 1.95, 1.72-2.20, respectively). These results suggested that elevated levels of RA were linked to an elevated risk of 30-day, 90-day, and one-year all-cause death. There was a similar trend between RA and the use of RRT, length of stay in ICUs, sepsis, and septic shock. The subgroup analysis did not reveal any considerable interplay among strata. When areas under the curve were compared, RA was a weaker predictor than the SAPS II score but a stronger predictor than red blood cell distribution width (RDW) or albumin alone (
    Conclusions: RA was an independent prognostic predictor in critically ill older patients with AKI, and greater RA was linked to a higher probability of death. The risk of AKI is complicated when RRT occurs; sepsis and septic shock increase with RA levels.
    Language English
    Publishing date 2023-04-03
    Publishing country Egypt
    Document type Journal Article
    ZDB-ID 2596429-X
    ISSN 2090-2859 ; 2090-2840
    ISSN (online) 2090-2859
    ISSN 2090-2840
    DOI 10.1155/2023/3591243
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Single-cell transcriptome sequencing atlas of cassava tuberous root.

    Song, Jinjia / Fan, Benji / Shao, Xiaodie / Zang, Yuwei / Wang, Dayong / Min, Yi

    Frontiers in plant science

    2023  Volume 13, Page(s) 1053669

    Abstract: Introduction: Single-cell transcriptome sequencing (ScRNA-seq) has emerged as an effective method for examining cell differentiation and development. In non-model plants, it hasn't been employed very much, especially in sink organs that are abundant in ... ...

    Abstract Introduction: Single-cell transcriptome sequencing (ScRNA-seq) has emerged as an effective method for examining cell differentiation and development. In non-model plants, it hasn't been employed very much, especially in sink organs that are abundant in secondary metabolites.
    Results: In this study, we sequenced the single-cell transcriptomes at two developmental phases of cassava tuberous roots using the technology known as 10x Genomics (S1, S2). In total, 14,566 cells were grouped into 15 different cell types, primarily based on the marker genes of model plants known to exist. In the pseudotime study, the cell differentiation trajectory was defined, and the difference in gene expression between the two stages on the pseudotime axis was compared. The differentiation process of the vascular tissue and cerebral tissue was identified by the trajectory. We discovered the rare cell type known as the casparian strip via the use of up-regulated genes and pseudotime analysis, and we explained how it differentiates from endodermis. The successful creation of a protoplast isolation technique for organs rich in starch was also described in our study.
    Discussion: Together, we created the first high-resolution single-cell transcriptome atlas of cassava tuberous roots, which made significant advancements in our understanding of how these roots differentiate and develop.
    Language English
    Publishing date 2023-01-04
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2613694-6
    ISSN 1664-462X
    ISSN 1664-462X
    DOI 10.3389/fpls.2022.1053669
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: The application of PROTAC in HDAC.

    Chen, Shaoting / Zheng, Yuxiang / Liang, Benji / Yin, Yudong / Yao, Jian / Wang, Quande / Liu, Yanghan / Neamati, Nouri

    European journal of medicinal chemistry

    2023  Volume 260, Page(s) 115746

    Abstract: Inducing protein degradation by proteolysis targeting chimera (PROTAC) has provided great opportunities for scientific research and industrial applications. Histone deacetylase (HDAC)-PROTAC has been widely developed since the first report of its ability ...

    Abstract Inducing protein degradation by proteolysis targeting chimera (PROTAC) has provided great opportunities for scientific research and industrial applications. Histone deacetylase (HDAC)-PROTAC has been widely developed since the first report of its ability to induce the degradation of SIRT2 in 2017. To date, ten of the eighteen HDACs (HDACs 1-8, HDAC10, and SIRT2) have been successfully targeted and degraded by HDAC-PROTACs. HDAC-PROTACs surpass traditional HDAC inhibitors in many aspects, such as higher selectivity, more potent antiproliferative activity, and the ability to disrupt the enzyme-independent functions of a multifunctional protein and overcome drug resistance. Rationally designing HDAC-PROTACs is a main challenge in development because slight variations in chemical structure can lead to drastic effects on the efficiency and selectivity of the degradation. In the future, HDAC-PROTACs can potentially be involved in clinical research with the support of the increased amount of in vivo data, pharmacokinetic evaluation, and pharmacological studies.
    MeSH term(s) Sirtuin 2 ; Histone Deacetylase Inhibitors/pharmacology ; Proteolysis ; Proteolysis Targeting Chimera
    Chemical Substances Sirtuin 2 (EC 3.5.1.-) ; Histone Deacetylase Inhibitors ; Proteolysis Targeting Chimera
    Language English
    Publishing date 2023-08-19
    Publishing country France
    Document type Journal Article ; Review
    ZDB-ID 188597-2
    ISSN 1768-3254 ; 0009-4374 ; 0223-5234
    ISSN (online) 1768-3254
    ISSN 0009-4374 ; 0223-5234
    DOI 10.1016/j.ejmech.2023.115746
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Using the meteorological early warning model to improve the prediction accuracy of water damage geological disasters around pipelines in mountainous areas.

    Hong, Bingyuan / Shao, Bowen / Wang, Benji / Zhao, Juncheng / Qian, Jiren / Guo, Jian / Xu, Yupeng / Li, Cuicui / Zhu, Baikang

    The Science of the total environment

    2023  Volume 889, Page(s) 164334

    Abstract: This paper focuses on the threat of water damage geological disasters brought by the complex terrain along the long-distance natural gas pipeline. The role of rainfall factors in the occurrence of such disasters has been fully considered, a ... ...

    Abstract This paper focuses on the threat of water damage geological disasters brought by the complex terrain along the long-distance natural gas pipeline. The role of rainfall factors in the occurrence of such disasters has been fully considered, a meteorological early warning model for water damage geological disasters in mountainous areas based on slope units has been constructed to improve the prediction accuracy of such disasters and timely early warning and forecasting. An actual natural gas pipeline in a typical mountainous area of Zhejiang Province is taken as an example. The hydrology-curvature combined analysis method is chosen to divide the slope units, and the SHALSTAB model is used to fit the slope soil environment to calculate the stability level. Finally, the stability level is coupled with rainfall data to calculate the early warning index for water damage geological disasters in the study area. The results show that compared with the separate SHALSTAB model, the early warning results coupled with rainfall are more effective in predicting water damage geological disasters. The early warning results are compared with the actual disaster points, among the nine actual disaster points, most of the slope units around seven disaster points are in the state of needing early warning, the early warning accuracy rate reaches 77.8 %. The proposed early warning model can carry out targeted deployment in advance according to the divided slope units, and the prediction accuracy of geological disasters induced by heavy rainfall weather is significantly higher and more suitable for the actual location of the disaster point, which can provide a basis for accurate disaster prevention in the research area and areas with similar geological environments.
    MeSH term(s) Natural Gas ; Disasters ; Weather ; Soil ; Geology
    Chemical Substances Natural Gas ; Soil
    Language English
    Publishing date 2023-05-18
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 121506-1
    ISSN 1879-1026 ; 0048-9697
    ISSN (online) 1879-1026
    ISSN 0048-9697
    DOI 10.1016/j.scitotenv.2023.164334
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Carbon Nanotubes-Based Fuel Cell for Cr(VI) Removal and Electricity Generation.

    Wang, Dongfang / Wu, Chuanxuan / Zong, Zhiqiang / Ye, Jinghong / Wu, Qingchuan / Li, Ruohan / Zhou, Benji / Xu, He / Cai, Dongqing

    Langmuir : the ACS journal of surfaces and colloids

    2022  Volume 38, Issue 29, Page(s) 9021–9029

    Abstract: A fuel cell, an energy transducer, can convert chemical energy into electrical energy. In this work, graphite felt (GF) loaded with polypyrrole (PPy) and carboxylic carbon nanotubes (CNTs-COOH) was used as a cathode (GF/PPy/CNTs-COOH) in a double-chamber ...

    Abstract A fuel cell, an energy transducer, can convert chemical energy into electrical energy. In this work, graphite felt (GF) loaded with polypyrrole (PPy) and carboxylic carbon nanotubes (CNTs-COOH) was used as a cathode (GF/PPy/CNTs-COOH) in a double-chamber nonbiofuel cell (D-nBFC) to remove Cr(VI) efficiently. Therein, Na
    Language English
    Publishing date 2022-07-14
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2005937-1
    ISSN 1520-5827 ; 0743-7463
    ISSN (online) 1520-5827
    ISSN 0743-7463
    DOI 10.1021/acs.langmuir.2c01472
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Using the meteorological early warning model to improve the prediction accuracy of water damage geological disasters around pipelines in mountainous areas

    Hong, Bingyuan / Shao, Bowen / Wang, Benji / Zhao, Juncheng / Qian, Jiren / Guo, Jian / Xu, Yupeng / Li, Cuicui / Zhu, Baikang

    Science of the Total Environment. 2023 Sept., v. 889 p.164334-

    2023  

    Abstract: This paper focuses on the threat of water damage geological disasters brought by the complex terrain along the long-distance natural gas pipeline. The role of rainfall factors in the occurrence of such disasters has been fully considered, a ... ...

    Abstract This paper focuses on the threat of water damage geological disasters brought by the complex terrain along the long-distance natural gas pipeline. The role of rainfall factors in the occurrence of such disasters has been fully considered, a meteorological early warning model for water damage geological disasters in mountainous areas based on slope units has been constructed to improve the prediction accuracy of such disasters and timely early warning and forecasting. An actual natural gas pipeline in a typical mountainous area of Zhejiang Province is taken as an example. The hydrology-curvature combined analysis method is chosen to divide the slope units, and the SHALSTAB model is used to fit the slope soil environment to calculate the stability level. Finally, the stability level is coupled with rainfall data to calculate the early warning index for water damage geological disasters in the study area. The results show that compared with the separate SHALSTAB model, the early warning results coupled with rainfall are more effective in predicting water damage geological disasters. The early warning results are compared with the actual disaster points, among the nine actual disaster points, most of the slope units around seven disaster points are in the state of needing early warning, the early warning accuracy rate reaches 77.8 %. The proposed early warning model can carry out targeted deployment in advance according to the divided slope units, and the prediction accuracy of geological disasters induced by heavy rainfall weather is significantly higher and more suitable for the actual location of the disaster point, which can provide a basis for accurate disaster prevention in the research area and areas with similar geological environments.
    Keywords disaster preparedness ; edaphic factors ; landscapes ; meteorological data ; models ; mountains ; natural gas ; prediction ; rain ; China ; Slope unit ; Shallow landslide ; Geological disaster ; SHALSTAB model ; Rainfall meteorology
    Language English
    Dates of publication 2023-09
    Publishing place Elsevier B.V.
    Document type Article ; Online
    ZDB-ID 121506-1
    ISSN 1879-1026 ; 0048-9697
    ISSN (online) 1879-1026
    ISSN 0048-9697
    DOI 10.1016/j.scitotenv.2023.164334
    Database NAL-Catalogue (AGRICOLA)

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  7. Article ; Online: Relation between Red Cell Distribution Width and Mortality in Critically Ill Patients with Acute Respiratory Distress Syndrome

    Benji Wang / Yuqiang Gong / Binyu Ying / Bihuan Cheng

    BioMed Research International, Vol

    2019  Volume 2019

    Abstract: Background. Currently, evidence regarding the predictive significance of red blood cell distribution width (RDW) among patients with acute respiratory distress syndrome (ARDS) remains scarce. The aim of this study was to determine the prognostic value of ...

    Abstract Background. Currently, evidence regarding the predictive significance of red blood cell distribution width (RDW) among patients with acute respiratory distress syndrome (ARDS) remains scarce. The aim of this study was to determine the prognostic value of RDW for critically ill patients with ARDS. Methods. We studied all patients with ARDS from the Multiparameter Intelligent Monitoring in Intensive Care Database III (MIMIC-III) for whom RDW was available. The clinical outcomes were 30-day and 90-day mortality. Analyses included logistic multivariate regression model, Receiver Operating Characteristic (ROC) analysis, and subgroup analysis. Results. A total of 404 eligible ARDS patients were included. After adjustment for several clinical characteristics related to 30-day mortality, the adjusted OR (95% CIs) for RDW levels ≥14.5% was 1.91 (1.08, 3.39). A similar trend was observed for 90-day mortality. The RDW levels ≥14.5% were also an independent predictor of 90-day mortality (OR, 2.56; 95% CI, 1.50 to 4.37; P = 0.0006) compared with the low RDW levels (<14.5%). In subgroup analyses, RDW showed no significant interactions with other relevant risk factors for 30-day mortality. Conclusions. RDW appeared to be a novel, independent predictor of mortality in critically ill patients with ARDS.
    Keywords Medicine ; R
    Language English
    Publishing date 2019-01-01T00:00:00Z
    Publisher Hindawi Limited
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  8. Article ; Online: The Neutrophil Percentage-to-Albumin Ratio Is Associated with All-Cause Mortality in Critically Ill Patients with Acute Kidney Injury

    Benji Wang / Diwen Li / Bihuan Cheng / Binyu Ying / Yuqiang Gong

    BioMed Research International, Vol

    2020  Volume 2020

    Abstract: Background. There is no evidence to suggest the predictive power of neutrophil percentage-to-albumin ratio (NPAR) in patients with acute kidney injury (AKI). We hypothesized that NPAR would correlate with all-cause mortality in critically ill patients ... ...

    Abstract Background. There is no evidence to suggest the predictive power of neutrophil percentage-to-albumin ratio (NPAR) in patients with acute kidney injury (AKI). We hypothesized that NPAR would correlate with all-cause mortality in critically ill patients with AKI. Methods. From the MIMIC-III V1.4 database, we extracted demographics, vital signs, comorbidities, laboratory tests, and other clinical data. The clinical endpoints were 30-, 90- and 365-day all-cause mortality in critically ill patients with AKI. Cox proportional hazards models were used to evaluate the prognostic values of NPAR, and subgroup analyses were performed to measure mortality across various subgroups. Results. A total of 7,481 eligible subjects were enrolled. In multivariate analysis, after adjustments for age, ethnicity, gender, and other confounding factors, higher NPARs were associated with an increased risk of 30-, 90- and 365-day all-cause mortality in critically ill patients with AKI (tertile 3 versus tertile 1: adjusted HR, 95% CI: 1.48, 1.30–1.69; 1.47, 1.31–1.66; 1.46, 1.32–1.62, respectively; P trend <0.01). A similar trend was observed in the NPAR group division by quintiles. Subgroup analysis revealed no significant interactions in most strata. Conclusions. Increased NPAR correlates with increased risk of all-cause mortality in critically ill patients with AKI.
    Keywords Medicine ; R
    Language English
    Publishing date 2020-01-01T00:00:00Z
    Publisher Hindawi Limited
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  9. Article ; Online: Serum Anion Gap Predicts All-Cause Mortality in Critically Ill Patients with Acute Kidney Injury

    Bihuan Cheng / Diwen Li / Yuqiang Gong / Binyu Ying / Benji Wang

    Disease Markers, Vol

    Analysis of the MIMIC-III Database

    2020  Volume 2020

    Abstract: Background. No epidemiological study has investigated the effect of anion gap (AG) on the prognosis of critically ill patients with acute kidney injury (AKI). Therefore, we aimed to determine the association between serum AG and all-cause mortality in ... ...

    Abstract Background. No epidemiological study has investigated the effect of anion gap (AG) on the prognosis of critically ill patients with acute kidney injury (AKI). Therefore, we aimed to determine the association between serum AG and all-cause mortality in these patients. Methods. From MIMIC III, we extracted demographics, vital signs, laboratory tests, comorbidities, and scoring systems from the first 24 h after patient ICU admission. A generalized additive model was used to identify a nonlinear association between anion gap and 30-day all-cause mortality. We also used the Cox proportional hazards models to measure the association between AG levels and 30-day, 90-day, and 365-day mortality in patients with AKI. Results. A total of 11,573 eligible subjects were extracted from the MIMIC-III. The relationship between AG levels and 30-day all-cause mortality in patients with AKI was nonlinear, with a U-shaped curve. In multivariate analysis, after adjusting for potential confounders, higher AG was a significant predictor of 30-day, 90-day, and 365-day all-cause mortality compared with lower AG (HR, 95% CI: 1.54, 1.33–1.75; 1.55, 1.38–1.73; 1.46, 1.31–1.60). Conclusions. The relationship between AG levels and 30-day all-cause mortality described a U-shaped curve. High-AG levels were associated with increased risk 30-day, 90-day, and 365-day all-cause mortality in critically ill patients with AKI.
    Keywords Medicine (General) ; R5-920
    Subject code 610
    Language English
    Publishing date 2020-01-01T00:00:00Z
    Publisher Hindawi Limited
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  10. Article: Carbon Nanotubes-Based Fuel Cell for Cr(VI) Removal and Electricity Generation

    Wang, Dongfang / Wu, Chuanxuan / Zong, Zhiqiang / Ye, Jinghong / Wu, Qingchuan / Li, Ruohan / Zhou, Benji / Xu, He / Cai, Dongqing

    Langmuir. 2022 July 14, v. 38, no. 29

    2022  

    Abstract: A fuel cell, an energy transducer, can convert chemical energy into electrical energy. In this work, graphite felt (GF) loaded with polypyrrole (PPy) and carboxylic carbon nanotubes (CNTs–COOH) was used as a cathode (GF/PPy/CNTs–COOH) in a double-chamber ...

    Abstract A fuel cell, an energy transducer, can convert chemical energy into electrical energy. In this work, graphite felt (GF) loaded with polypyrrole (PPy) and carboxylic carbon nanotubes (CNTs–COOH) was used as a cathode (GF/PPy/CNTs–COOH) in a double-chamber nonbiofuel cell (D-nBFC) to remove Cr(VI) efficiently. Therein, Na₂S₂O₃ in an alkaline solution and Cr(VI) in a strongly acidic solution were employed as anode and cathode solutions, respectively. An agar salt bridge, consisting of saturated KCl solution, was used to transport ions between the anode and cathode. This system suggested that the removal efficiency of Cr(VI) could reach 99.6%. The maximum current, power, and power density could achieve 136.8 μA, 18.7 μW, and 20.8 mW/m² at 90 min, respectively. Additionally, GF/PPy/CNTs–COOH also had good electrocatalytic stability and reusability after four cycles, which played an important role in the development of the D-nBFC system. Therefore, this study provides an environmentally friendly and efficient method to remove Cr(VI) and generate electricity simultaneously.
    Keywords agar ; anodes ; carbon nanotubes ; cathodes ; electric power ; electricity ; electricity generation ; fuel cells ; graphene ; pyrroles
    Language English
    Dates of publication 2022-0714
    Size p. 9021-9029.
    Publishing place American Chemical Society
    Document type Article
    ZDB-ID 2005937-1
    ISSN 1520-5827 ; 0743-7463
    ISSN (online) 1520-5827
    ISSN 0743-7463
    DOI 10.1021/acs.langmuir.2c01472
    Database NAL-Catalogue (AGRICOLA)

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