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  1. Article ; Online: Quantifying Environmental Mitigation of Aerosol Viral Load in a Controlled Chamber With Participants Diagnosed With Coronavirus Disease 2019.

    Parhizkar, Hooman / Dietz, Leslie / Olsen-Martinez, Andreas / Horve, Patrick F / Barnatan, Liliana / Northcutt, Dale / Van Den Wymelenberg, Kevin G

    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

    2022  Volume 75, Issue 1, Page(s) e174–e184

    Abstract: Background: Several studies indicate that coronavirus disease 2019 (COVID-19) is primarily transmitted within indoor spaces. Therefore, environmental characterization of severe acute respiratory syndrome coronavirus 2 viral load with respect to human ... ...

    Abstract Background: Several studies indicate that coronavirus disease 2019 (COVID-19) is primarily transmitted within indoor spaces. Therefore, environmental characterization of severe acute respiratory syndrome coronavirus 2 viral load with respect to human activity, building parameters, and environmental mitigation strategies is critical to combat disease transmission.
    Methods: We recruited 11 participants diagnosed with COVID-19 to individually occupy a controlled chamber and conduct specified physical activities under a range of environmental conditions; we collected human and environmental samples over a period of 3 days for each participant.
    Results: Here we show that increased viral load, measured by lower RNA cycle threshold (CT) values, in nasal samples is associated with higher viral loads in environmental aerosols and on surfaces captured in both the near field (1.2 m) and far field (3.5 m). We also found that aerosol viral load in far field is correlated with the number of particles within the range of 1-2.5 µm. Furthermore, we found that increased ventilation and filtration significantly reduced aerosol and surface viral loads, while higher relative humidity resulted in lower aerosol and higher surface viral load, consistent with an increased rate of particle deposition at higher relative humidity. Data from near field aerosol trials with high expiratory activities suggest that respiratory particles of smaller sizes (0.3-1 µm) best characterize the variance of near field aerosol viral load.
    Conclusions: Our findings indicate that building operation practices such as ventilation, filtration, and humidification substantially reduce the environmental aerosol viral load and therefore inhalation dose, and should be prioritized to improve building health and safety.
    MeSH term(s) COVID-19 ; Humans ; Respiratory Aerosols and Droplets ; SARS-CoV-2 ; Serologic Tests ; Viral Load
    Language English
    Publishing date 2022-01-06
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1099781-7
    ISSN 1537-6591 ; 1058-4838
    ISSN (online) 1537-6591
    ISSN 1058-4838
    DOI 10.1093/cid/ciac006
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Cell-type-specific responses to the microbiota across all tissues of the larval zebrafish.

    Massaquoi, Michelle S / Kong, Garth L / Chilin-Fuentes, Daisy / Ngo, Julia S / Horve, Patrick F / Melancon, Ellie / Hamilton, M Kristina / Eisen, Judith S / Guillemin, Karen

    Cell reports

    2023  Volume 42, Issue 2, Page(s) 112095

    Abstract: Animal development proceeds in the presence of intimate microbial associations, but the extent to which different host cells across the body respond to resident microbes remains to be fully explored. Using the vertebrate model organism, the larval ... ...

    Abstract Animal development proceeds in the presence of intimate microbial associations, but the extent to which different host cells across the body respond to resident microbes remains to be fully explored. Using the vertebrate model organism, the larval zebrafish, we assessed transcriptional responses to the microbiota across the entire body at single-cell resolution. We find that cell types across the body, not limited to tissues at host-microbe interfaces, respond to the microbiota. Responses are cell-type-specific, but across many tissues the microbiota enhances cell proliferation, increases metabolism, and stimulates a diversity of cellular activities, revealing roles for the microbiota in promoting developmental plasticity. This work provides a resource for exploring transcriptional responses to the microbiota across all cell types of the vertebrate body and generating new hypotheses about the interactions between vertebrate hosts and their microbiota.
    MeSH term(s) Animals ; Zebrafish ; Larva ; Microbiota ; Cell Proliferation
    Language English
    Publishing date 2023-02-13
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 2649101-1
    ISSN 2211-1247 ; 2211-1247
    ISSN (online) 2211-1247
    ISSN 2211-1247
    DOI 10.1016/j.celrep.2023.112095
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article: Correction for Dietz et al., "2019 Novel Coronavirus (COVID-19) Pandemic: Built Environment Considerations To Reduce Transmission".

    Dietz, Leslie / Horve, Patrick F / Coil, David A / Fretz, Mark / Eisen, Jonathan A / Wymelenberg, Kevin Van Den

    mSystems

    2020  Volume 5, Issue 3

    Keywords covid19
    Language English
    Publishing date 2020-05-05
    Publishing country United States
    Document type Journal Article ; Published Erratum
    ISSN 2379-5077
    ISSN 2379-5077
    DOI 10.1128/mSystems.00375-20
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Reply to McDonald, "Protections against the Risk of Airborne SARS-CoV-2 Infection".

    Dietz, Leslie / Horve, Patrick F / Coil, David A / Fretz, Mark / Eisen, Jonathan A / Van Den Wymelenberg, Kevin

    mSystems

    2020  Volume 5, Issue 3

    Keywords covid19
    Language English
    Publishing date 2020-06-16
    Publishing country United States
    Document type Journal Article
    ISSN 2379-5077
    ISSN 2379-5077
    DOI 10.1128/mSystems.00435-20
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Cell-type-specific responses to the microbiota across all tissues of the larval zebrafish

    Michelle S. Massaquoi / Garth L. Kong / Daisy Chilin-Fuentes / Julia S. Ngo / Patrick F. Horve / Ellie Melancon / M. Kristina Hamilton / Judith S. Eisen / Karen Guillemin

    Cell Reports, Vol 42, Iss 2, Pp 112095- (2023)

    2023  

    Abstract: Summary: Animal development proceeds in the presence of intimate microbial associations, but the extent to which different host cells across the body respond to resident microbes remains to be fully explored. Using the vertebrate model organism, the ... ...

    Abstract Summary: Animal development proceeds in the presence of intimate microbial associations, but the extent to which different host cells across the body respond to resident microbes remains to be fully explored. Using the vertebrate model organism, the larval zebrafish, we assessed transcriptional responses to the microbiota across the entire body at single-cell resolution. We find that cell types across the body, not limited to tissues at host-microbe interfaces, respond to the microbiota. Responses are cell-type-specific, but across many tissues the microbiota enhances cell proliferation, increases metabolism, and stimulates a diversity of cellular activities, revealing roles for the microbiota in promoting developmental plasticity. This work provides a resource for exploring transcriptional responses to the microbiota across all cell types of the vertebrate body and generating new hypotheses about the interactions between vertebrate hosts and their microbiota.
    Keywords CP: Microbiology ; CP: Immunology ; Biology (General) ; QH301-705.5
    Language English
    Publishing date 2023-02-01T00:00:00Z
    Publisher Elsevier
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  6. Article ; Online: Longitudinal analysis of built environment and aerosol contamination associated with isolated COVID-19 positive individuals.

    Horve, Patrick F / Dietz, Leslie G / Bowles, Garis / MacCrone, Georgia / Olsen-Martinez, Andreas / Northcutt, Dale / Moore, Vincent / Barnatan, Liliana / Parhizkar, Hooman / Van Den Wymelenberg, Kevin G

    Scientific reports

    2022  Volume 12, Issue 1, Page(s) 7395

    Abstract: The indoor environment is the primary location for the transmission of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causative agent of coronavirus disease 2019 (COVID-19), largely driven by respiratory particle accumulation in the ... ...

    Abstract The indoor environment is the primary location for the transmission of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causative agent of coronavirus disease 2019 (COVID-19), largely driven by respiratory particle accumulation in the air and increased connectivity between the individuals occupying indoor spaces. In this study, we aimed to track a cohort of subjects as they occupied a COVID-19 isolation dormitory to better understand the impact of subject and environmental viral load over time, symptoms, and room ventilation on the detectable viral load within a single room. We find that subject samples demonstrate a decrease in overall viral load over time, symptoms significantly impact environmental viral load, and we provide the first real-world evidence for decreased aerosol SARS-CoV-2 load with increasing ventilation, both from mechanical and window sources. These results may guide environmental viral surveillance strategies and be used to better control the spread of SARS-CoV-2 within built environments and better protect those caring for individuals with COVID-19.
    MeSH term(s) Aerosols ; Built Environment ; COVID-19 ; Humans ; SARS-CoV-2 ; Ventilation
    Chemical Substances Aerosols
    Language English
    Publishing date 2022-05-05
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2615211-3
    ISSN 2045-2322 ; 2045-2322
    ISSN (online) 2045-2322
    ISSN 2045-2322
    DOI 10.1038/s41598-022-11303-8
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: Viable bacterial communities on hospital window components in patient rooms.

    Horve, Patrick F / Dietz, Leslie G / Ishaq, Suzanne L / Kline, Jeff / Fretz, Mark / Van Den Wymelenberg, Kevin G

    PeerJ

    2020  Volume 8, Page(s) e9580

    Abstract: Previous studies demonstrate an exchange of bacteria between hospital room surfaces and patients, and a reduction in survival of microorganisms in dust inside buildings from sunlight exposure. While the transmission of microorganisms between humans and ... ...

    Abstract Previous studies demonstrate an exchange of bacteria between hospital room surfaces and patients, and a reduction in survival of microorganisms in dust inside buildings from sunlight exposure. While the transmission of microorganisms between humans and their local environment is a continuous exchange which generally does not raise cause for alarm, in a hospital setting with immunocompromised patients, these building-source microbial reservoirs may pose a risk. Window glass is often neglected during hospital disinfection protocols, and the microbial communities found there have not previously been examined. This pilot study examined whether living bacterial communities, and specifically the pathogens Methicillin-resistant
    Language English
    Publishing date 2020-07-27
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2703241-3
    ISSN 2167-8359
    ISSN 2167-8359
    DOI 10.7717/peerj.9580
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Evaluating Fomite Risk of Brown Paper Bags Storing Personal Protective Equipment Exposed to SARS-CoV-2: A Quasi-Experimental Study

    Unger, Kyirsty / Dietz, Leslie / Horve, Patrick F / Lin, Amber / Van Den Wymelenberg, Kevin G / Kea, Bory / Kinney, Erin

    medRxiv

    Abstract: Introduction: Literature is lacking on the safety of storing contaminated PPE in paper bags for reuse, potentially increasing exposure to frontline healthcare workers (HCW) and patients. Objectives: To evaluate the effectiveness of paper bags as a ... ...

    Abstract Introduction: Literature is lacking on the safety of storing contaminated PPE in paper bags for reuse, potentially increasing exposure to frontline healthcare workers (HCW) and patients. Objectives: To evaluate the effectiveness of paper bags as a barrier for fomite transmission of SARS-CoV-2 by storing limited reusable face masks, respirators, and face shields. Methods: This quasi-experimental study evaluated the presence of SARS-CoV-2 on the interior and exterior surfaces of paper bags containing PPE that had aerosolized exposures in clinical and simulated settings. Between May and October 2020, 30 unique PPE items were collected from critical and intermediate care COVID-19 units at two urban hospitals. Exposed PPE, worn by either an infected patient or HCW during a SARS-CoV-2 aerosolizing event, were placed into an unused brown paper bag. Samples were tested at 30-minute and 12-hour intervals. Results: A total of 177 swabs were processed from 30 PPE samples. We found a (12/177 total) 6.8% positivity rate among all samples across both collection sites. Highest positivity rates were associated with ventilator disconnection (1/6 samples, 16.7% positivity) and exposure to respiratory droplets from coughing (2/24 samples, 8.3% positivity), compared to exposure to high-flow nasal cannula (8/129 samples, 6.2% positivity) or tracheostomy surgery (1/18 samples, 5.6% positivity). Positivity rates differed between hospital units. Total positivity rates were similar between 30-minute (6.7%) and 12-hour (6.9%) sample testing time intervals. Control samples exposed to inactivated SARS-CoV-2 droplets had higher total viral counts than samples exposed to nebulized aerosols. Conclusions: Data suggests paper bags are not a significant fomite risk for SARS-CoV-2 transmission. However, controls demonstrated a risk with droplet exposure. Data can inform guidelines for storing and re-using PPE in situations of limited supplies during future pandemics.
    Keywords covid19
    Language English
    Publishing date 2022-02-08
    Publisher Cold Spring Harbor Laboratory Press
    Document type Article ; Online
    DOI 10.1101/2022.02.07.22270332
    Database COVID19

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  9. Article: 2019 Novel Coronavirus (COVID-19) Pandemic: Built Environment Considerations To Reduce Transmission.

    Dietz, Leslie / Horve, Patrick F / Coil, David A / Fretz, Mark / Eisen, Jonathan A / Van Den Wymelenberg, Kevin

    mSystems

    2020  Volume 5, Issue 2

    Abstract: With the rapid spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) that results in coronavirus disease 2019 (COVID-19), corporate entities, federal, state, county, and city governments, universities, school districts, places of worship, ...

    Abstract With the rapid spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) that results in coronavirus disease 2019 (COVID-19), corporate entities, federal, state, county, and city governments, universities, school districts, places of worship, prisons, health care facilities, assisted living organizations, daycares, homeowners, and other building owners and occupants have an opportunity to reduce the potential for transmission through built environment (BE)-mediated pathways. Over the last decade, substantial research into the presence, abundance, diversity, function, and transmission of microbes in the BE has taken place and revealed common pathogen exchange pathways and mechanisms. In this paper, we synthesize this microbiology of the BE research and the known information about SARS-CoV-2 to provide actionable and achievable guidance to BE decision makers, building operators, and all indoor occupants attempting to minimize infectious disease transmission through environmentally mediated pathways. We believe this information is useful to corporate and public administrators and individuals responsible for building operations and environmental services in their decision-making process about the degree and duration of social-distancing measures during viral epidemics and pandemics.
    Keywords covid19
    Language English
    Publishing date 2020-04-07
    Publishing country United States
    Document type Journal Article ; Review
    ISSN 2379-5077
    ISSN 2379-5077
    DOI 10.1128/mSystems.00245-20
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Reply to McDonald, “Protections against the Risk of Airborne SARS-CoV-2 Infection”

    Leslie Dietz / Patrick F. Horve / David A. Coil / Mark Fretz / Jonathan A. Eisen / Kevin Van Den Wymelenberg

    mSystems, Vol 5, Iss 3, p e00435-

    2020  Volume 20

    Keywords Microbiology ; QR1-502 ; covid19
    Language English
    Publishing date 2020-06-01T00:00:00Z
    Publisher American Society for Microbiology
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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