Article ; Online: Generalised Image Processing Method for Quantitative Analysis of Nucleus, Cell and Focal Adhesion Clusters
Current Directions in Biomedical Engineering, Vol 7, Iss 2, Pp 558-
2021 Volume 561
Abstract: Focal adhesion clusters (FAC) are dynamic and complex structures that help cells to sense physicochemical properties of their environment. Research in biomaterials, cell adhesion or cell migration often involves the visualization of FAC by fluorescence ... ...
Abstract | Focal adhesion clusters (FAC) are dynamic and complex structures that help cells to sense physicochemical properties of their environment. Research in biomaterials, cell adhesion or cell migration often involves the visualization of FAC by fluorescence staining and microscopy, which necessitates quantitative analysis of FAC and other cell features in microscopy images using image processing. Fluorescence microscopy images of human umbilical vein endothelial cells (HUVEC) obtained at 63x magnification were quantitatively analysed using ImageJ software. A generalised algorithm for selective segmentation and morphological analysis of FAC, nucleus and cell morphology is implemented. Further, a method for discrimination of FAC near the nucleus and around the periphery is implemented using masks. Our algorithm is able to effectively quantify different morphological characteristics of cell components and shows a high sensitivity and specificity while providing a modular software implementation. |
---|---|
Keywords | focal adhesion clusters ; algorithm ; fluorescence ; quantitative analysis ; imagej ; sensitivity ; specificity ; location selective segmentation ; masks ; Medicine ; R |
Subject code | 669 |
Language | English |
Publishing date | 2021-10-01T00:00:00Z |
Publisher | De Gruyter |
Document type | Article ; Online |
Database | BASE - Bielefeld Academic Search Engine (life sciences selection) |
Full text online
More links
Kategorien
Inter-library loan at ZB MED
Your chosen title can be delivered directly to ZB MED Cologne location if you are registered as a user at ZB MED Cologne.