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  1. Article ; Online: Sodium channel subpopulations with distinct biophysical properties and subcellular localization enhance cardiac conduction.

    Weinberg, Seth H

    The Journal of general physiology

    2023  Volume 155, Issue 8

    Abstract: Sodium (Na+) current is responsible for the rapid depolarization of cardiac myocytes that triggers the cardiac action potential upstroke. Recent studies have illustrated the presence of multiple pools of Na+ channels with distinct biophysical properties ... ...

    Abstract Sodium (Na+) current is responsible for the rapid depolarization of cardiac myocytes that triggers the cardiac action potential upstroke. Recent studies have illustrated the presence of multiple pools of Na+ channels with distinct biophysical properties and subcellular localization, including clustering of channels at the intercalated disk and along the lateral membrane. Computational studies predict that Na+ channel clusters at the intercalated disk can regulate cardiac conduction via modulation of the narrow intercellular cleft between electrically coupled myocytes. However, these studies have primarily focused on the redistribution of Na+ channels between intercalated disk and lateral membranes and have not considered the distinct biophysical properties of the Na+ channel subpopulations. In this study, we use computational modeling to simulate computational models of single cardiac cells and one-dimensional cardiac tissues and predict the function of distinct Na+ channel subpopulations. Single-cell simulations predict that a subpopulation of Na+ channels with shifted steady-state activation and inactivation voltage dependency promotes an earlier action potential upstroke. In cardiac tissues that account for distinct subcellular spatial localization, simulations predict that shifted Na+ channels contribute to faster and more robust conduction in response to changes in tissue structure (i.e., cleft width), gap junctional coupling, and rapid pacing rates. Simulations predict that the intercalated disk-localized shifted Na+ channels contribute proportionally more to total Na+ charge than lateral membrane-localized Na+ channels. Importantly, our work supports the hypothesis that Na+ channel redistribution may be a critical mechanism by which cells can respond to perturbations to support fast and robust conduction.
    MeSH term(s) Myocardium ; Myocytes, Cardiac/physiology ; Sodium Channels ; Action Potentials/physiology ; Gap Junctions/physiology
    Chemical Substances Sodium Channels
    Language English
    Publishing date 2023-06-07
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 3118-5
    ISSN 1540-7748 ; 0022-1295
    ISSN (online) 1540-7748
    ISSN 0022-1295
    DOI 10.1085/jgp.202313382
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Building A Pipeline for Precision Antiarrhythmic Therapy.

    Weinberg, Seth H / Hund, Thomas J

    JACC. Clinical electrophysiology

    2024  Volume 10, Issue 2, Page(s) 365–366

    MeSH term(s) Humans ; Anti-Arrhythmia Agents/therapeutic use ; Ether-A-Go-Go Potassium Channels
    Chemical Substances Anti-Arrhythmia Agents ; Ether-A-Go-Go Potassium Channels
    Language English
    Publishing date 2024-01-03
    Publishing country United States
    Document type Editorial
    ZDB-ID 2846739-5
    ISSN 2405-5018 ; 2405-500X ; 2405-500X
    ISSN (online) 2405-5018 ; 2405-500X
    ISSN 2405-500X
    DOI 10.1016/j.jacep.2023.11.016
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: When it comes to the heart, age, and sex matter (sometimes).

    Weinberg, Seth H / King, D Ryan

    American journal of physiology. Heart and circulatory physiology

    2023  Volume 324, Issue 2, Page(s) H226–H228

    MeSH term(s) Guinea Pigs ; Animals ; Electrophysiologic Techniques, Cardiac ; Heart ; Sex Factors
    Language English
    Publishing date 2023-01-06
    Publishing country United States
    Document type Journal Article ; Comment
    ZDB-ID 603838-4
    ISSN 1522-1539 ; 0363-6135
    ISSN (online) 1522-1539
    ISSN 0363-6135
    DOI 10.1152/ajpheart.00719.2022
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Bacterial sodium channels as gene therapy for cardiac arrhythmia: slow (activation and inactivation kinetics) and steady wins the race.

    Moreno, Jonathan D / Weinberg, Seth H

    American journal of physiology. Heart and circulatory physiology

    2023  Volume 325, Issue 6, Page(s) H1412–H1414

    MeSH term(s) Humans ; Action Potentials ; Arrhythmias, Cardiac/genetics ; Arrhythmias, Cardiac/therapy ; Heart/physiology ; Voltage-Gated Sodium Channels ; Genetic Therapy
    Chemical Substances Voltage-Gated Sodium Channels
    Language English
    Publishing date 2023-10-27
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Research Support, N.I.H., Extramural ; Comment
    ZDB-ID 603838-4
    ISSN 1522-1539 ; 0363-6135
    ISSN (online) 1522-1539
    ISSN 0363-6135
    DOI 10.1152/ajpheart.00676.2023
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Emergent activity, heterogeneity, and robustness in a calcium feedback model of the sinoatrial node.

    Moise, Nicolae / Weinberg, Seth H

    Biophysical journal

    2023  Volume 122, Issue 9, Page(s) 1613–1632

    Abstract: The sinoatrial node (SAN) is the primary pacemaker of the heart. SAN activity emerges at an early point in life and maintains a steady rhythm for the lifetime of the organism. The ion channel composition and currents of SAN cells can be influenced by a ... ...

    Abstract The sinoatrial node (SAN) is the primary pacemaker of the heart. SAN activity emerges at an early point in life and maintains a steady rhythm for the lifetime of the organism. The ion channel composition and currents of SAN cells can be influenced by a variety of factors. Therefore, the emergent activity and long-term stability imply some form of dynamical feedback control of SAN activity. We adapt a recent feedback model-previously utilized to describe control of ion conductances in neurons-to a model of SAN cells and tissue. The model describes a minimal regulatory mechanism of ion channel conductances via feedback between intracellular calcium and an intrinsic target calcium level. By coupling a SAN cell to the calcium feedback model, we show that spontaneous electrical activity emerges from quiescence and is maintained at steady state. In a 2D SAN tissue model, spatial variability in intracellular calcium targets lead to significant, self-organized heterogeneous ion channel expression and calcium transients throughout the tissue. Furthermore, multiple pacemaking regions appear, which interact and lead to time-varying cycle length, demonstrating that variability in heart rate is an emergent property of the feedback model. Finally, we demonstrate that the SAN tissue is robust to the silencing of leading cells or ion channel knockouts. Thus, the calcium feedback model can reproduce and explain many fundamental emergent properties of activity in the SAN that have been observed experimentally based on a minimal description of intracellular calcium and ion channel regulatory networks.
    MeSH term(s) Sinoatrial Node ; Calcium/metabolism ; Feedback ; Ion Channels/metabolism ; Biological Clocks/physiology ; Action Potentials/physiology
    Chemical Substances Calcium (SY7Q814VUP) ; Ion Channels
    Language English
    Publishing date 2023-03-21
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 218078-9
    ISSN 1542-0086 ; 0006-3495
    ISSN (online) 1542-0086
    ISSN 0006-3495
    DOI 10.1016/j.bpj.2023.03.024
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Crossing the Great Sex-Specific Divide in Cardiac Electrophysiology.

    Veeraraghavan, Rengasayee / Moise, Nicolae / Weinberg, Seth H

    JACC. Clinical electrophysiology

    2023  Volume 9, Issue 12, Page(s) 2649–2651

    MeSH term(s) Male ; Female ; Humans ; Electrophysiologic Techniques, Cardiac ; Arrhythmias, Cardiac/diagnosis ; Arrhythmias, Cardiac/therapy ; Electrophysiology ; Cardiac Electrophysiology
    Language English
    Publishing date 2023-10-25
    Publishing country United States
    Document type Editorial ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't ; Comment
    ZDB-ID 2846739-5
    ISSN 2405-5018 ; 2405-500X ; 2405-500X
    ISSN (online) 2405-5018 ; 2405-500X
    ISSN 2405-500X
    DOI 10.1016/j.jacep.2023.09.003
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Automaticity in ventricular myocyte cell pairs with ephaptic and gap junction coupling.

    Ly, Cheng / Weinberg, Seth H

    Chaos (Woodbury, N.Y.)

    2022  Volume 32, Issue 3, Page(s) 33123

    Abstract: Spontaneous electrical activity, or automaticity, in the heart is required for normal physiological function. However, irregular automaticity, in particular, originating from the ventricles, can trigger life-threatening cardiac arrhythmias. Thus, ... ...

    Abstract Spontaneous electrical activity, or automaticity, in the heart is required for normal physiological function. However, irregular automaticity, in particular, originating from the ventricles, can trigger life-threatening cardiac arrhythmias. Thus, understanding mechanisms of automaticity and synchronization is critical. Recent work has proposed that excitable cells coupled via a shared narrow extracellular cleft can mediate coupling, i.e., ephaptic coupling, that promotes automaticity in cell pairs. However, the dynamics of these coupled cells incorporating both ephaptic and gap junction coupling has not been explored. Here, we show that automaticity and synchronization robustly emerges via a Hopf bifurcation from either (i) increasing the fraction of inward rectifying potassium channels (carrying the I
    MeSH term(s) Action Potentials/physiology ; Arrhythmias, Cardiac/metabolism ; Gap Junctions/metabolism ; Humans ; Models, Cardiovascular ; Myocytes, Cardiac/metabolism
    Language English
    Publishing date 2022-03-28
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1472677-4
    ISSN 1089-7682 ; 1054-1500
    ISSN (online) 1089-7682
    ISSN 1054-1500
    DOI 10.1063/5.0085291
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: A review of computational modeling, machine learning and image analysis in cancer metastasis dynamics

    Shreyas U. Hirway / Seth H. Weinberg

    Computational and Systems Oncology, Vol 3, Iss 1, Pp n/a-n/a (2023)

    2023  

    Abstract: Abstract Cancer is a life‐threatening process that stems from genetic mutations in cells, which leads to the formation of tumors, and is a major cause of deaths in the United States, with secondary metastasis being a major driver of fatality. The ... ...

    Abstract Abstract Cancer is a life‐threatening process that stems from genetic mutations in cells, which leads to the formation of tumors, and is a major cause of deaths in the United States, with secondary metastasis being a major driver of fatality. The development of an optimal metastatic environment is an essential process prior to tumor metastasis. This process, called pre‐metastatic niche formation, involves the activation of resident fibroblast‐like cells and macrophages. Tumor‐mediated factors introduced to this environment transform resident cells that secrete additional growth factors and remodel the extracellular matrix, which is thought to promote tumor colonization and metastasis in the secondary environment. Furthermore, an important component of metastasis is the biological process of epithelial–mesenchymal transition, which can be exploited by cancer cells to change their phenotype, to migrate and proliferate as necessary. In this review, we discuss recent advances in the investigation of cancer growth and migration. Computational models that focus on biochemical signaling and multicellular dynamics are examined. Machine learning models and image analysis that classify cancer‐related data are also explored. Through this review, we highlight advances in the study of important aspects of cancer and metastasis signaling and computational tools to study these dynamics.
    Keywords biochemical signaling ; cancer ; computational modeling ; epithelial–mesenchymal transition ; image analysis ; machine learning ; Neoplasms. Tumors. Oncology. Including cancer and carcinogens ; RC254-282 ; Computer applications to medicine. Medical informatics ; R858-859.7
    Subject code 610
    Language English
    Publishing date 2023-03-01T00:00:00Z
    Publisher Wiley
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  9. Article ; Online: Long-term changes in heart rate and electrical remodeling contribute to alternans formation in heart failure: a patient-specific in silico study.

    Phadumdeo, Vrishti M / Mallare, Brianna L / Hund, Thomas J / Weinberg, Seth H

    American journal of physiology. Heart and circulatory physiology

    2023  Volume 325, Issue 2, Page(s) H414–H431

    Abstract: Individuals with chronic heart failure (CHF) have an increased risk of ventricular arrhythmias, which has been linked to pathological cellular remodeling and may also be mediated by changes in heart rate. Heart rate typically fluctuates on a timescale ... ...

    Abstract Individuals with chronic heart failure (CHF) have an increased risk of ventricular arrhythmias, which has been linked to pathological cellular remodeling and may also be mediated by changes in heart rate. Heart rate typically fluctuates on a timescale ranging from seconds to hours, termed heart rate variability (HRV). This variability is reduced in CHF, and this HRV reduction is associated with a greater risk for arrhythmias. Furthermore, variations in heart rate influence the formation of proarrhythmic alternans, a beat-to-beat alternation in the action potential duration (APD), or intracellular calcium (Ca). In this study, we investigate how long-term changes in heart rate and electrical remodeling associated with CHF influence alternans formation. We measure key statistical properties of the RR-interval sequences from ECGs of individuals with normal sinus rhythm (NSR) and CHF. Patient-specific RR-interval sequences and synthetic sequences (randomly generated to mimicking these statistical properties) are used as the pacing protocol for a discrete time-coupled map model that governs APD and intracellular Ca handling of a single cardiac myocyte, modified to account for pathological electrical remodeling in CHF. Patient-specific simulations show that beat-to-beat differences in APD vary temporally in both populations, with alternans formation more prevalent in CHF. Parameter studies using synthetic sequences demonstrate that increasing the autocorrelation time or mean RR-interval reduces APD alternations, whereas increasing the RR-interval standard deviation leads to higher alternans magnitudes. Importantly, we find that although both the CHF-associated changes in heart rate and electrical remodeling influence alternans formation, variations in heart rate may be more influential.
    MeSH term(s) Humans ; Heart Rate/physiology ; Atrial Remodeling ; Arrhythmias, Cardiac ; Heart Failure ; Myocytes, Cardiac/physiology ; Action Potentials/physiology ; Calcium
    Chemical Substances Calcium (SY7Q814VUP)
    Language English
    Publishing date 2023-07-07
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 603838-4
    ISSN 1522-1539 ; 0363-6135
    ISSN (online) 1522-1539
    ISSN 0363-6135
    DOI 10.1152/ajpheart.00220.2023
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Sodium channels and the intercalated disk - it is all about location, location, location.

    Veeraraghavan, Rengasayee / Moise, Nicolae / Weinberg, Seth H

    The Journal of physiology

    2021  Volume 599, Issue 21, Page(s) 4735–4736

    MeSH term(s) Gap Junctions ; Myocardium ; Myocytes, Cardiac ; Sodium Channels
    Chemical Substances Sodium Channels
    Language English
    Publishing date 2021-10-08
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 3115-x
    ISSN 1469-7793 ; 0022-3751
    ISSN (online) 1469-7793
    ISSN 0022-3751
    DOI 10.1113/JP282350
    Database MEDical Literature Analysis and Retrieval System OnLINE

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