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  1. Article: Down-regulation of p-coumaroyl quinate/shikimate 3′-hydroxylase (C3′H) and cinnamate 4-hydroxylase (C4H) genes in the lignin biosynthetic pathway of Eucalyptus urophylla × E. grandis leads to improved sugar release

    Sykes, Robert W / Erica L. Gjersing / Kirk Foutz / William H. Rottmann / Sean A. Kuhn / Cliff E. Foster / Angela Ziebell / Geoffrey B. Turner / Stephen R. Decker / Maud A. W. Hinchee / Mark F. Davis

    Biotechnology for biofuels. 2015 Dec., v. 8, no. 1

    2015  

    Abstract: ... regulated lines had different lignin compositions with average S/G/H ratios of 48.5/33.2/18.3 for the C3′H ... C3′H, EC 1.14.13.36) were evaluated for cell wall composition and reduced recalcitrance. RESULTS ... Eucalyptus trees with down-regulated C4H or C3′H expression displayed lowered overall lignin content ...

    Abstract BACKGROUND: Lignocellulosic materials provide an attractive replacement for food-based crops used to produce ethanol. Understanding the interactions within the cell wall is vital to overcome the highly recalcitrant nature of biomass. One factor imparting plant cell wall recalcitrance is lignin, which can be manipulated by making changes in the lignin biosynthetic pathway. In this study, eucalyptus down-regulated in expression of cinnamate 4-hydroxylase (C4H, EC 1.14.13.11) or p-coumaroyl quinate/shikimate 3′-hydroxylase (C3′H, EC 1.14.13.36) were evaluated for cell wall composition and reduced recalcitrance. RESULTS: Eucalyptus trees with down-regulated C4H or C3′H expression displayed lowered overall lignin content. The control samples had an average of 29.6 %, the C3′H reduced lines had an average of 21.7 %, and the C4H reduced lines had an average of 18.9 % lignin from wet chemical analysis. The C3′H and C4H down-regulated lines had different lignin compositions with average S/G/H ratios of 48.5/33.2/18.3 for the C3′H reduced lines and 59.0/39.8/1.2 for the C4H reduced lines, compared to the control with 65.9/33.2/1.0. Both the C4H and C3′H down-regulated lines had reduced recalcitrance as indicated by increased sugar release as determined using enzymatic conversion assays utilizing both no pretreatment and a hot water pretreatment. CONCLUSIONS: Lowering lignin content rather than altering sinapyl alcohol/coniferyl alcohol/4-coumaryl alcohol ratios was found to have the largest impact on reducing recalcitrance of the transgenic eucalyptus variants. The development of lower recalcitrance trees opens up the possibility of using alternative pretreatment strategies in biomass conversion processes that can reduce processing costs.
    Keywords Eucalyptus urophylla ; biochemical pathways ; biomass ; cell wall components ; cell walls ; chemical analysis ; crops ; ethanol ; gene expression regulation ; genes ; genetically modified organisms ; lignin ; lignocellulose ; sinapyl alcohol ; sugars ; trans-cinnamate 4-monooxygenase ; trees
    Language English
    Dates of publication 2015-12
    Size p. 128.
    Publishing place BioMed Central
    Document type Article
    ZDB-ID 2421351-2
    ISSN 1754-6834
    ISSN 1754-6834
    DOI 10.1186/s13068-015-0316-x
    Database NAL-Catalogue (AGRICOLA)

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  2. Book ; Online ; E-Book: Ketogenic diet therapies for epilepsy and other conditions

    Kossoff, Eric H. / Turner, Zahava / Cervenka, Mackenzie C. / Henry, Bobbie J.

    2021  

    Author's details Eric H. Kossoff, Zahava Turner, Mackenzie C. Cervenka, Bobbie J. Barron
    Keywords Epilepsy / diet therapy ; Diet, Ketogenic ; Diet, High-Protein Low-Carbohydrate
    Language English
    Size 1 Online-Ressource (xviii, 302 Seiten), Illustrationen
    Edition Seventh edition
    Publisher Demos Health
    Publishing place New York
    Publishing country United States
    Document type Book ; Online ; E-Book
    Note Preceded by The ketogenic and modified Atkins diets / Eric H. Kossoff, Zahava Turner, Sarah Doerrer, Mackenzie C. Cervenka, Bobbie J. Henry. Sixth edition. [2016] ; Seventh edition
    Remark Zugriff für angemeldete ZB MED-Nutzerinnen und -Nutzer
    HBZ-ID HT020809063
    ISBN 978-0-8261-4959-6 ; 9780826149589 ; 0-8261-4959-6 ; 0826149588
    Database ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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  3. Article: [Electroencephalographic and clinical studies of the hemiconvulsion-hemiplegia syndrome (H.H.S.) and of the hemiconvulsion-hemiplegia-epilepsy syndrome (H.H.E.S.)].

    TURNER, M / DE BUSSO, F / NACHMAN DE TURJANSKI, M

    Archivos argentinos de pediatria

    1961  Volume 55, Page(s) 243–256

    MeSH term(s) Biomedical Research ; Child ; Epilepsy ; Hemiplegia ; Humans ; Infant ; Seizures ; Syndrome
    Language Spanish
    Publishing date 1961-05
    Publishing country Argentina
    Document type Journal Article
    ZDB-ID 424449-7
    ISSN 1668-3501 ; 0325-0075 ; 0004-0487
    ISSN (online) 1668-3501
    ISSN 0325-0075 ; 0004-0487
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Beluga whale and bottlenose dolphin ACE2 proteins allow cell entry mediated by spike protein from three variants of SARS-CoV-2.

    Stone, H M / Unal, E / Romano, T A / Turner, P E

    Biology letters

    2023  Volume 19, Issue 12, Page(s) 20230321

    Abstract: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) viruses infect numerous non-human species. Spillover of SARS-CoV-2 into novel animal reservoirs may present a danger to host individuals of these species, particularly worrisome in populations ... ...

    Abstract Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) viruses infect numerous non-human species. Spillover of SARS-CoV-2 into novel animal reservoirs may present a danger to host individuals of these species, particularly worrisome in populations already endangered or threatened by extinction. In addition, emergence in new reservoirs could pose spillback threats to humans, especially in the form of virus variants that further mutate when infecting other animal hosts. Previous work suggests beluga whales (
    MeSH term(s) Animals ; Humans ; SARS-CoV-2/metabolism ; Bottle-Nosed Dolphin ; Angiotensin-Converting Enzyme 2 ; Spike Glycoprotein, Coronavirus/chemistry ; Spike Glycoprotein, Coronavirus/metabolism ; COVID-19 ; Beluga Whale ; Virus Internalization
    Chemical Substances Angiotensin-Converting Enzyme 2 (EC 3.4.17.23) ; spike protein, SARS-CoV-2 ; Spike Glycoprotein, Coronavirus
    Language English
    Publishing date 2023-12-06
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 2135022-X
    ISSN 1744-957X ; 1744-9561
    ISSN (online) 1744-957X
    ISSN 1744-9561
    DOI 10.1098/rsbl.2023.0321
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: Seeking a Role for Translational Control by Alternative Polyadenylation in

    Turner, Rachael E / Beilharz, Traude H

    Microorganisms

    2021  Volume 9, Issue 9

    Abstract: Alternative polyadenylation (APA) represents an important mechanism for regulating isoform-specific translation efficiency, stability, and localisation. Though some progress has been made in understanding its consequences in metazoans, the role of APA in ...

    Abstract Alternative polyadenylation (APA) represents an important mechanism for regulating isoform-specific translation efficiency, stability, and localisation. Though some progress has been made in understanding its consequences in metazoans, the role of APA in the model organism
    Language English
    Publishing date 2021-09-05
    Publishing country Switzerland
    Document type Journal Article ; Review
    ZDB-ID 2720891-6
    ISSN 2076-2607
    ISSN 2076-2607
    DOI 10.3390/microorganisms9091885
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Evolution of a cross-feeding interaction following a key innovation in a long-term evolution experiment with

    Turner, Caroline B / Blount, Zachary D / Mitchell, Daniel H / Lenski, Richard E

    Microbiology (Reading, England)

    2023  Volume 169, Issue 8

    Abstract: The evolution of a novel trait can profoundly change an organism's effects on its environment, which can in turn affect the further evolution of that organism and any coexisting organisms. We examine these effects and feedbacks following the evolution of ...

    Abstract The evolution of a novel trait can profoundly change an organism's effects on its environment, which can in turn affect the further evolution of that organism and any coexisting organisms. We examine these effects and feedbacks following the evolution of a novel function in the Long-Term Evolution Experiment (LTEE) with
    MeSH term(s) Escherichia coli/genetics ; Ecosystem ; Citrates ; Citric Acid ; Dicarboxylic Acids
    Chemical Substances Citrates ; Citric Acid (2968PHW8QP) ; Dicarboxylic Acids
    Language English
    Publishing date 2023-08-30
    Publishing country England
    Document type Journal Article ; Research Support, U.S. Gov't, Non-P.H.S.
    ZDB-ID 1180712-x
    ISSN 1465-2080 ; 1350-0872
    ISSN (online) 1465-2080
    ISSN 1350-0872
    DOI 10.1099/mic.0.001390
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: The acceptability, practicality, implementation and efficacy of a physical and social activity intervention 'BreatheHappy' for people with long-term respiratory conditions: A feasibility study.

    Lewis, A / Turner, L A / Fryer, S / Smith, R / Dillarstone, H / Patrick, Y W / Bevan-Smith, E

    Chronic respiratory disease

    2024  Volume 21, Page(s) 14799731241238435

    Abstract: Objectives: This study aimed to determine the feasibility of a group-based pilot programme of low-to-moderate physical activity training, education and social activities, by investigating acceptability, practicality, implementation and efficacy testing. ...

    Abstract Objectives: This study aimed to determine the feasibility of a group-based pilot programme of low-to-moderate physical activity training, education and social activities, by investigating acceptability, practicality, implementation and efficacy testing. We offer suggestions on programme adaptions for future study.
    Methods: People with a range of chronic respiratory diseases were invited to participate in a pilot 12 week group activity programme. Activities included outdoor walking, tai-chi, education and a range of social activities. Acceptability was determined by participant experiences determined during interviews. Practicality was determined by programme and outcome measure completion, cost and adverse events. Implementation was determined according to whether the programme ran as planned. Efficacy was determined by statistical analyses of outcomes including hand grip strength, timed up and go test, COPD Helplessness Index, COPD Assessment Test, and measures of physical activity via accelerometry.
    Results: Thematic analysis indicated that the "BreatheHappy" programme was acceptable. Seven of nine participants completed eight out of 10 sessions and the majority completed all outcome measures. "BreatheHappy" was therefore considered practical. The programme was not implemented as planned, with only 10 sessions running rather than the 12 intended. There was a significant increase in daily step counts (MD: 1284 95% CI: 240-2329
    Discussion: A 10-week programme of low-moderate physical activity training, education and social activities shows signs of feasibility for future research. Suggested adaptions for future study include using physical activity measures such as daily step count or light physical activity for a primary outcome, and mental health and social health related outcome measures relatable to participant's beneficial experiences of the programme. Recruitment in future studies will try and reach both those less socially active and possibly those who have completed pulmonary rehabilitation (PR). Venues should be close to efficient transport links whilst different frequencies and durations of programme delivery should be trialled. Adequate funding should be provided for both staff running the programme and blinded research staff for outcome measurement.
    MeSH term(s) Humans ; Feasibility Studies ; Hand Strength ; Postural Balance ; Time and Motion Studies ; Pulmonary Disease, Chronic Obstructive/rehabilitation ; Quality of Life
    Language English
    Publishing date 2024-03-30
    Publishing country England
    Document type Journal Article
    ZDB-ID 2211488-9
    ISSN 1479-9731 ; 1479-9723
    ISSN (online) 1479-9731
    ISSN 1479-9723
    DOI 10.1177/14799731241238435
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Changes in pediatric referrals after the 2009 ketogenic diet consensus recommendations.

    Stainman, Rebecca S / Turner, Zahava / Kossoff, Eric H

    Epilepsy & behavior : E&B

    2024  Volume 155, Page(s) 109791

    Abstract: Background: In 2009, the International Ketogenic Diet Study Group published recommendations for children receiving ketogenic diet (KD) therapy for epilepsy. The document included a table listing epilepsy syndromes and conditions in which the KD has been ...

    Abstract Background: In 2009, the International Ketogenic Diet Study Group published recommendations for children receiving ketogenic diet (KD) therapy for epilepsy. The document included a table listing epilepsy syndromes and conditions in which the KD has been particularly beneficial, hoping that physicians would refer children for the KD sooner.
    Purpose: To measure the impact of these 2009 recommendations on referral practice, we compared children initiated on the KD at Johns Hopkins Hospital (JHH) 10 years before and after the recommendations.
    Results: Overall, children referred to the KD who met indications increased from the pre- to post-recommendation group, 44 % (112/256) to 69 % (175/255) (p < 0.001), with JHH neurologists specifically referring more frequently (10/112, 9 % to 58/175, 33 %) (p < 0.01). Referrals increased for Glut-1 deficiency (0 % to 2.4 %, p = 0.015), Dravet syndrome (0 % to 6.7 %, p < 0.01), Rett syndrome (0.4 % to 3 %, p = 0.018), and formula-fed only status (16 % to 31 %, p < 0.01). The chances of > 50 % seizure reduction for all children referred improved slightly between decades (56 % to 61 %, p = 0.30).
    Conclusions: Following the 2009 recommendations, our study shows there was an increase in referrals for children with indications at our center. Referrals from neurologists at our own institution increased the most. Ketogenic diet efficacy improved slightly over time but did not reach significance.
    Language English
    Publishing date 2024-04-20
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2010587-3
    ISSN 1525-5069 ; 1525-5050
    ISSN (online) 1525-5069
    ISSN 1525-5050
    DOI 10.1016/j.yebeh.2024.109791
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: The devil's in the defaults: An interrupted time-series analysis of the impact of default duration elimination on exposure to fluoroquinolone therapy.

    Wrenn, Rebekah H / Slaton, Cara N / Diez, Tony / Turner, Nicholas A / Yarrington, Michael E / Anderson, Deverick J / Moehring, Rebekah W

    Infection control and hospital epidemiology

    2024  , Page(s) 1–7

    Abstract: ... e-script), influenced antibiotic days of therapy.: Design: Interrupted time-series analysis ... for 12 months before and after the intervention.: Results: The study included 35,609 fluoroquinolone e ... scripts from the preintervention period and 31,303 fluoroquinolone e-scripts from the postintervention ...

    Abstract Objective: To determine whether removal of default duration, embedded in electronic prescription (e-script), influenced antibiotic days of therapy.
    Design: Interrupted time-series analysis.
    Setting: The study was conducted across 2 community hospitals, 1 academic hospital, 3 emergency departments, and 86 ambulatory clinics.
    Patients: Adults prescribed a fluoroquinolone with a duration <31 days.
    Interventions: Removal of standard 10-day fluoroquinolone default duration and addition of literature-based duration guidance in the order entry on December 19, 2017. The study period included data for 12 months before and after the intervention.
    Results: The study included 35,609 fluoroquinolone e-scripts from the preintervention period and 31,303 fluoroquinolone e-scripts from the postintervention period, accounting for 520,388 cumulative fluoroquinolone DOT. Mean durations before and after the intervention were 7.8 (SD, 4.3) and 7.7 (SD, 4.5), a nonsignificant change. E-scripts with a 10-day duration decreased prior to and after the default removal. The inpatient setting showed a significant 8% drop in 10-day e-scripts after default removal and a reduced median duration by 1 day; 10-day scripts declined nonsignificantly in ED and ambulatory settings. In the ambulatory settings, both 7- and 14-day e-script durations increased after default removal.
    Conclusion: Removal of default 10-day antibiotic durations did not affect overall mean duration but did shift patterns in prescribing, depending on practice setting. Stewardship interventions must be studied in the context of practice setting. Ambulatory stewardship efforts separate from inpatient programs are needed because interventions cannot be assumed to have similar effects.
    Language English
    Publishing date 2024-02-13
    Publishing country United States
    Document type Journal Article
    ZDB-ID 639378-0
    ISSN 1559-6834 ; 0195-9417 ; 0899-823X
    ISSN (online) 1559-6834
    ISSN 0195-9417 ; 0899-823X
    DOI 10.1017/ice.2024.16
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Determination of underivatized amino acids in human plasma using ion pair liquid chromatography/tandem mass spectrometry.

    Turner, Cheryl / Refsum, Helga / Bastani, Nasser E

    Journal of chromatography. B, Analytical technologies in the biomedical and life sciences

    2023  Volume 1229, Page(s) 123893

    Abstract: Accurate quantification of amino acids (AA) is essential for several applications, including clinical research, food analysis, and pharmaceutical studies. In this study, we developed an analytical method based on liquid chromatography with electrospray ... ...

    Abstract Accurate quantification of amino acids (AA) is essential for several applications, including clinical research, food analysis, and pharmaceutical studies. In this study, we developed an analytical method based on liquid chromatography with electrospray ionization coupled to tandem mass spectrometry detection (LC-ESI-MS/MS). This method was devised to accurately quantify a spectrum of amino acids, notably taurine, creatinine, glutathione (GSH), and sulfur-containing amino acids (SAAs) such as methionine, cysteine, and homocysteine, using only 10 μL of human plasma. A stable isotope derivative of each AA is used as an internal standard (IS) for accurate quantification. For retention and separation on a C18 column, heptafluorobutyric acid (HFBA) was employed as an ion pair agent. Multiple reaction monitoring (MRM) in positive mode with the precursor-to-product ion transitions at m/z is used for quantification. The method showed excellent linearity for all AA with a high correlation coefficient (r > 0.9927). The linear fit indicates that the detector response is linear over the tested range of standard concentrations. The accuracy and precision of the method were within the acceptable range of 92-110% and < 15%, respectively. The limit of detection (LOD) and limit of quantification (LOQ) were in the range of 0.001-1.80 µM and 0.004-6.0 µM, respectively. No significant ion suppression or carry over was observed. In conclusion, the assay was validated and found to have adequate accuracy, precision, linearity, sensitivity and selectivity. The assay has been successfully applied to the analysis of human plasma.
    MeSH term(s) Humans ; Tandem Mass Spectrometry/methods ; Spectrometry, Mass, Electrospray Ionization/methods ; Amino Acids ; Chromatography, Liquid/methods ; Pharmaceutical Preparations ; Chromatography, High Pressure Liquid/methods ; Reproducibility of Results
    Chemical Substances Amino Acids ; Pharmaceutical Preparations
    Language English
    Publishing date 2023-10-01
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 1180823-8
    ISSN 1873-376X ; 0378-4347 ; 1570-0232 ; 1387-2273
    ISSN (online) 1873-376X
    ISSN 0378-4347 ; 1570-0232 ; 1387-2273
    DOI 10.1016/j.jchromb.2023.123893
    Database MEDical Literature Analysis and Retrieval System OnLINE

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