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  1. Article ; Online: Circadian Clock Components Offer Targets for Crop Domestication and Improvement.

    McClung, C Robertson

    Genes

    2021  Volume 12, Issue 3

    Abstract: During plant domestication and improvement, farmers select for alleles present in wild species that improve performance in new selective environments associated with cultivation and use. The selected alleles become enriched and other alleles depleted in ... ...

    Abstract During plant domestication and improvement, farmers select for alleles present in wild species that improve performance in new selective environments associated with cultivation and use. The selected alleles become enriched and other alleles depleted in elite cultivars. One important aspect of crop improvement is expansion of the geographic area suitable for cultivation; this frequently includes growth at higher or lower latitudes, requiring the plant to adapt to novel photoperiodic environments. Many crops exhibit photoperiodic control of flowering and altered photoperiodic sensitivity is commonly required for optimal performance at novel latitudes. Alleles of a number of circadian clock genes have been selected for their effects on photoperiodic flowering in multiple crops. The circadian clock coordinates many additional aspects of plant growth, metabolism and physiology, including responses to abiotic and biotic stresses. Many of these clock-regulated processes contribute to plant performance. Examples of selection for altered clock function in tomato demonstrate that with domestication, the phasing of the clock is delayed with respect to the light-dark cycle and the period is lengthened; this modified clock is associated with increased chlorophyll content in long days. These and other data suggest the circadian clock is an attractive target during breeding for crop improvement.
    MeSH term(s) Circadian Clocks/genetics ; Crops, Agricultural/genetics ; Domestication ; Gene Expression Regulation, Plant ; Lycopersicon esculentum/genetics ; Lycopersicon esculentum/growth & development ; Photoperiod ; Plant Breeding
    Language English
    Publishing date 2021-03-06
    Publishing country Switzerland
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S. ; Review
    ZDB-ID 2527218-4
    ISSN 2073-4425 ; 2073-4425
    ISSN (online) 2073-4425
    ISSN 2073-4425
    DOI 10.3390/genes12030374
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: The Plant Circadian Oscillator.

    McClung, C Robertson

    Biology

    2019  Volume 8, Issue 1

    Abstract: It has been nearly 300 years since the first scientific demonstration of a self-sustaining circadian clock in plants. It has become clear that plants are richly rhythmic, and many aspects of plant biology, including photosynthetic light harvesting and ... ...

    Abstract It has been nearly 300 years since the first scientific demonstration of a self-sustaining circadian clock in plants. It has become clear that plants are richly rhythmic, and many aspects of plant biology, including photosynthetic light harvesting and carbon assimilation, resistance to abiotic stresses, pathogens, and pests, photoperiodic flower induction, petal movement, and floral fragrance emission, exhibit circadian rhythmicity in one or more plant species. Much experimental effort, primarily, but not exclusively in
    Language English
    Publishing date 2019-03-12
    Publishing country Switzerland
    Document type Journal Article ; Review
    ZDB-ID 2661517-4
    ISSN 2079-7737
    ISSN 2079-7737
    DOI 10.3390/biology8010014
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Rhythmic Leaf and Cotyledon Movement Analysis.

    Lou, Ping / Greenham, Kathleen / McClung, C Robertson

    Methods in molecular biology (Clifton, N.J.)

    2022  Volume 2494, Page(s) 125–134

    Abstract: The first descriptions of circadian rhythms were of the rhythmic leaf movements of plants. Rhythmic leaf movements offer a sensitive, noninvasive, nondestructive, and non-transgenic assay of plant circadian rhythms that can be readily automated, greatly ... ...

    Abstract The first descriptions of circadian rhythms were of the rhythmic leaf movements of plants. Rhythmic leaf movements offer a sensitive, noninvasive, nondestructive, and non-transgenic assay of plant circadian rhythms that can be readily automated, greatly facilitating genetic studies. Rhythmic leaf movement is particularly useful for the assessment of standing variation in clock function and can be readily applied to a diverse array of dicotyledonous plants, including both wild species and domesticated crops.
    MeSH term(s) Circadian Rhythm ; Cotyledon ; Movement ; Plant Leaves/genetics ; Plants
    Language English
    Publishing date 2022-04-25
    Publishing country United States
    Document type Journal Article
    ISSN 1940-6029
    ISSN (online) 1940-6029
    DOI 10.1007/978-1-0716-2297-1_9
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Circadian Clock Components Offer Targets for Crop Domestication and Improvement

    McClung, C. Robertson

    Genes. 2021 Mar. 06, v. 12, no. 3

    2021  

    Abstract: During plant domestication and improvement, farmers select for alleles present in wild species that improve performance in new selective environments associated with cultivation and use. The selected alleles become enriched and other alleles depleted in ... ...

    Abstract During plant domestication and improvement, farmers select for alleles present in wild species that improve performance in new selective environments associated with cultivation and use. The selected alleles become enriched and other alleles depleted in elite cultivars. One important aspect of crop improvement is expansion of the geographic area suitable for cultivation; this frequently includes growth at higher or lower latitudes, requiring the plant to adapt to novel photoperiodic environments. Many crops exhibit photoperiodic control of flowering and altered photoperiodic sensitivity is commonly required for optimal performance at novel latitudes. Alleles of a number of circadian clock genes have been selected for their effects on photoperiodic flowering in multiple crops. The circadian clock coordinates many additional aspects of plant growth, metabolism and physiology, including responses to abiotic and biotic stresses. Many of these clock-regulated processes contribute to plant performance. Examples of selection for altered clock function in tomato demonstrate that with domestication, the phasing of the clock is delayed with respect to the light–dark cycle and the period is lengthened; this modified clock is associated with increased chlorophyll content in long days. These and other data suggest the circadian clock is an attractive target during breeding for crop improvement.
    Keywords chlorophyll ; circadian clocks ; cultivars ; domestication ; metabolism ; photoperiod ; plant growth ; tomatoes
    Language English
    Dates of publication 2021-0306
    Publishing place Multidisciplinary Digital Publishing Institute
    Document type Article
    Note NAL-AP-2-clean
    ZDB-ID 2527218-4
    ISSN 2073-4425
    ISSN 2073-4425
    DOI 10.3390/genes12030374
    Database NAL-Catalogue (AGRICOLA)

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  5. Article ; Online: A fibre-optic pipeline lets the root circadian clock see the light.

    McClung, C Robertson

    Plant, cell & environment

    2018  Volume 41, Issue 8, Page(s) 1739–1741

    Abstract: This article comments on: Entrainment of Arabidopsis roots to the light:dark cycle by light piping. ...

    Abstract This article comments on: Entrainment of Arabidopsis roots to the light:dark cycle by light piping.
    MeSH term(s) Arabidopsis ; Circadian Clocks ; Circadian Rhythm ; Light ; Photoperiod
    Language English
    Publishing date 2018-06-15
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S. ; Comment
    ZDB-ID 391893-2
    ISSN 1365-3040 ; 0140-7791
    ISSN (online) 1365-3040
    ISSN 0140-7791
    DOI 10.1111/pce.13343
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Circadian clocks: Who knows where the time goes.

    McClung, C Robertson

    Nature plants

    2015  Volume 1, Page(s) 15172

    Language English
    Publishing date 2015-11-03
    Publishing country England
    Document type Journal Article
    ISSN 2055-0278
    ISSN (online) 2055-0278
    DOI 10.1038/nplants.2015.172
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: The Plant Circadian Oscillator

    McClung, C. Robertson

    Biology. 2019 Mar. 12, v. 8, no. 1

    2019  

    Abstract: It has been nearly 300 years since the first scientific demonstration of a self-sustaining circadian clock in plants. It has become clear that plants are richly rhythmic, and many aspects of plant biology, including photosynthetic light harvesting and ... ...

    Abstract It has been nearly 300 years since the first scientific demonstration of a self-sustaining circadian clock in plants. It has become clear that plants are richly rhythmic, and many aspects of plant biology, including photosynthetic light harvesting and carbon assimilation, resistance to abiotic stresses, pathogens, and pests, photoperiodic flower induction, petal movement, and floral fragrance emission, exhibit circadian rhythmicity in one or more plant species. Much experimental effort, primarily, but not exclusively in Arabidopsis thaliana, has been expended to characterize and understand the plant circadian oscillator, which has been revealed to be a highly complex network of interlocked transcriptional feedback loops. In addition, the plant circadian oscillator has employed a panoply of post-transcriptional regulatory mechanisms, including alternative splicing, adjustable rates of translation, and regulated protein activity and stability. This review focuses on our present understanding of the regulatory network that comprises the plant circadian oscillator. The complexity of this oscillatory network facilitates the maintenance of robust rhythmicity in response to environmental extremes and permits nuanced control of multiple clock outputs. Consistent with this view, the clock is emerging as a target of domestication and presents multiple targets for targeted breeding to improve crop performance.
    Keywords Arabidopsis thaliana ; abiotic stress ; alternative splicing ; carbon dioxide fixation ; circadian clocks ; domestication ; flowering ; odors ; pathogens ; pests ; photosynthesis ; transcription (genetics) ; translation (genetics)
    Language English
    Dates of publication 2019-0312
    Publishing place Multidisciplinary Digital Publishing Institute
    Document type Article
    ZDB-ID 2661517-4
    ISSN 2079-7737
    ISSN 2079-7737
    DOI 10.3390/biology8010014
    Database NAL-Catalogue (AGRICOLA)

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  8. Article ; Online: The Plant Circadian Oscillator

    C. Robertson McClung

    Biology, Vol 8, Iss 1, p

    2019  Volume 14

    Abstract: It has been nearly 300 years since the first scientific demonstration of a self-sustaining circadian clock in plants. It has become clear that plants are richly rhythmic, and many aspects of plant biology, including photosynthetic light harvesting and ... ...

    Abstract It has been nearly 300 years since the first scientific demonstration of a self-sustaining circadian clock in plants. It has become clear that plants are richly rhythmic, and many aspects of plant biology, including photosynthetic light harvesting and carbon assimilation, resistance to abiotic stresses, pathogens, and pests, photoperiodic flower induction, petal movement, and floral fragrance emission, exhibit circadian rhythmicity in one or more plant species. Much experimental effort, primarily, but not exclusively in Arabidopsis thaliana, has been expended to characterize and understand the plant circadian oscillator, which has been revealed to be a highly complex network of interlocked transcriptional feedback loops. In addition, the plant circadian oscillator has employed a panoply of post-transcriptional regulatory mechanisms, including alternative splicing, adjustable rates of translation, and regulated protein activity and stability. This review focuses on our present understanding of the regulatory network that comprises the plant circadian oscillator. The complexity of this oscillatory network facilitates the maintenance of robust rhythmicity in response to environmental extremes and permits nuanced control of multiple clock outputs. Consistent with this view, the clock is emerging as a target of domestication and presents multiple targets for targeted breeding to improve crop performance.
    Keywords circadian rhythms ; circadian clock ; transcriptional feedback loops ; plant circadian clock ; posttranscriptional ; posttranslational ; alternative splicing ; protein stability ; Biology (General) ; QH301-705.5
    Subject code 580 ; 571
    Language English
    Publishing date 2019-03-01T00:00:00Z
    Publisher MDPI AG
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  9. Article: A fibre‐optic pipeline lets the root circadian clock see the light

    McClung, C. Robertson

    Plant, cell and environment. 2018 Aug., v. 41, no. 8

    2018  

    Abstract: This article comments on: Entrainment of Arabidopsis roots to the light:dark cycle by light ... ...

    Abstract This article comments on: Entrainment of Arabidopsis roots to the light:dark cycle by light piping
    Keywords Arabidopsis ; circadian clocks ; roots
    Language English
    Dates of publication 2018-08
    Size p. 1739-1741.
    Publishing place John Wiley & Sons, Ltd
    Document type Article
    Note JOURNAL ARTICLE
    ZDB-ID 391893-2
    ISSN 1365-3040 ; 0140-7791
    ISSN (online) 1365-3040
    ISSN 0140-7791
    DOI 10.1111/pce.13343
    Database NAL-Catalogue (AGRICOLA)

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  10. Article ; Online: The biology of time: dynamic responses of cell types to developmental, circadian and environmental cues.

    Swift, Joseph / Greenham, Kathleen / Ecker, Joseph R / Coruzzi, Gloria M / Robertson McClung, C

    The Plant journal : for cell and molecular biology

    2021  Volume 109, Issue 4, Page(s) 764–778

    Abstract: As sessile organisms, plants are finely tuned to respond dynamically to developmental, circadian and environmental cues. Genome-wide studies investigating these types of cues have uncovered the intrinsically different ways they can impact gene expression ...

    Abstract As sessile organisms, plants are finely tuned to respond dynamically to developmental, circadian and environmental cues. Genome-wide studies investigating these types of cues have uncovered the intrinsically different ways they can impact gene expression over time. Recent advances in single-cell sequencing and time-based bioinformatic algorithms are now beginning to reveal the dynamics of these time-based responses within individual cells and plant tissues. Here, we review what these techniques have revealed about the spatiotemporal nature of gene regulation, paying particular attention to the three distinct ways in which plant tissues are time sensitive. (i) First, we discuss how studying plant cell identity can reveal developmental trajectories hidden in pseudotime. (ii) Next, we present evidence that indicates that plant cell types keep their own local time through tissue-specific regulation of the circadian clock. (iii) Finally, we review what determines the speed of environmental signaling responses, and how they can be contingent on developmental and circadian time. By these means, this review sheds light on how these different scales of time-based responses can act with tissue and cell-type specificity to elicit changes in whole plant systems.
    MeSH term(s) Arabidopsis/genetics ; Arabidopsis/metabolism ; Biology ; Circadian Clocks/physiology ; Cues ; Gene Expression Regulation, Developmental ; Gene Expression Regulation, Plant ; Plant Leaves ; Plant Proteins ; Plants ; Protein Biosynthesis
    Chemical Substances Plant Proteins
    Language English
    Publishing date 2021-12-06
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S. ; Review
    ZDB-ID 1088037-9
    ISSN 1365-313X ; 0960-7412
    ISSN (online) 1365-313X
    ISSN 0960-7412
    DOI 10.1111/tpj.15589
    Database MEDical Literature Analysis and Retrieval System OnLINE

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