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  1. Article ; Online: Disseminated tuberculosis after anti-TNF alpha treatment: Do not blindly trust the IGRA test.

    Delarbre, David / Junca-Laplace, Camille / Otto, Marie-Pierre / Antoine, Carole / Defuentes, Gilles

    Enfermedades infecciosas y microbiologia clinica (English ed.)

    2023  Volume 42, Issue 2, Page(s) 98–101

    Abstract: Introduction: Interferon gamma release assay (IGRA) is used to detect latent tuberculosis prior to biological treatments in the context of suspected inflammatory rheumatism.: Methods: We report the case of a 50-year-old woman with negative IGRA test ... ...

    Abstract Introduction: Interferon gamma release assay (IGRA) is used to detect latent tuberculosis prior to biological treatments in the context of suspected inflammatory rheumatism.
    Methods: We report the case of a 50-year-old woman with negative IGRA test before adalimumab introduction for presumed axial spondyloarthritis.
    Results: The worsening of symptoms under treatment led to further investigations and the diagnostic of disseminated tuberculosis (TB) was later established with miliary and multiple bone locations such as spondylitis and sacroilitis. The patient's history revealed past exposure to tuberculosis. This observation illustrates the limitations of IGRA in such situation due to its variable performance for active TB diagnosis.
    Conclusion: Misdiagnosis is frequent in bone tuberculosis due to non-specific signs. We draw the attention to the importance of a global risk assessment prior to the introduction of biological treatment for suspected chronic inflammatory rheumatism and recall the risk factors for false-negative IGRA. An extended treatment course may be necessary after exposure to anti-TNF-alpha.
    MeSH term(s) Female ; Humans ; Middle Aged ; Interferon-gamma Release Tests ; Tumor Necrosis Factor Inhibitors ; Tumor Necrosis Factor-alpha ; Tuberculin Test ; Rheumatic Fever ; Trust ; Tuberculosis/diagnosis ; Arthritis, Rheumatoid/drug therapy
    Chemical Substances Tumor Necrosis Factor Inhibitors ; Tumor Necrosis Factor-alpha
    Language English
    Publishing date 2023-10-31
    Publishing country Spain
    Document type Case Reports ; Journal Article
    ISSN 2529-993X
    ISSN (online) 2529-993X
    DOI 10.1016/j.eimce.2023.06.006
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Cutaneous diphtheria in a patient just returned from Tahiti.

    Menier, Lucie / Bourgea, Emilie / Otto, Marie-Pierre / Dutasta, Fabien / Morand, Jean-Jacques / Janvier, Frédéric

    Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases

    2022  Volume 28, Issue 12, Page(s) 1591–1593

    MeSH term(s) Humans ; Diphtheria/diagnosis ; Corynebacterium diphtheriae ; Polynesia ; Diphtheria Toxin
    Chemical Substances Diphtheria Toxin
    Language English
    Publishing date 2022-02-16
    Publishing country England
    Document type Journal Article
    ZDB-ID 1328418-6
    ISSN 1469-0691 ; 1470-9465 ; 1198-743X
    ISSN (online) 1469-0691
    ISSN 1470-9465 ; 1198-743X
    DOI 10.1016/j.cmi.2022.01.018
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Tuberculosis Case Detection and Guideline Adherence among Child Contacts in Switzerland: A Retrospective Observational Study.

    Gasser, Nathalie / Fritschi, Nora / Egger, Jean-Marie / Ritz, Nicole / Schoch, Otto D / Zellweger, Jean-Pierre

    Respiration; international review of thoracic diseases

    2023  Volume 102, Issue 11, Page(s) 934–943

    Abstract: Background: Children exposed to a tuberculosis (TB) index case are at risk of TB infection and disease.: Objectives: The aim of this study was to describe the proportion of child contacts who developed TB infection or disease after exposure and to ... ...

    Abstract Background: Children exposed to a tuberculosis (TB) index case are at risk of TB infection and disease.
    Objectives: The aim of this study was to describe the proportion of child contacts who developed TB infection or disease after exposure and to assess the diagnostic pathways and adherence to current guidelines.
    Methods: Retrospective observational study including children ≤16 years of age who had contact to a TB index case between January 2019 and July 2021. Analysis was stratified by age groups 0-4, 5-11, and 12-16 years.
    Results: Of 401 TB-exposed children, data were available for 380 (95%). Of those, 7 (2%) were diagnosed with TB disease and 35 (9%) with TB infection. We identified several deviations in the management compared to recommendations in national Swiss guidelines: In the children aged 0-4 years, only 82% were examined with an immunodiagnostic test or a chest radiography within 2 weeks after last contact. Recommended prophylactic treatment was prescribed in 66% of the children only. In the children aged 5-11 years, 64% were tested with an immunodiagnostic test in a first examination and 75% in a second examination, 2 weeks and 2 months after last contact, respectively.
    Conclusions: Contact investigations of children exposed to a TB index case identified a significant proportion of children with TB infection and disease in a low TB incidence setting. We observed significant deviations from the guidelines in the contact investigations suggesting the need for improved implementation.
    MeSH term(s) Adolescent ; Child ; Humans ; Guideline Adherence ; Latent Tuberculosis/diagnosis ; Switzerland/epidemiology ; Tuberculin Test ; Tuberculosis/diagnosis ; Tuberculosis/epidemiology ; Retrospective Studies
    Language English
    Publishing date 2023-10-27
    Publishing country Switzerland
    Document type Observational Study ; Journal Article
    ZDB-ID 206674-9
    ISSN 1423-0356 ; 0025-7931
    ISSN (online) 1423-0356
    ISSN 0025-7931
    DOI 10.1159/000534362
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Answer to September 2021 Photo Quiz.

    Lesaca, Julien / Pecoul, Thomas / Otto, Marie-Pierre / Combes, Emmanuel / Darles, Chrystelle / Benner, Patrick / Janvier, Frédéric

    Journal of clinical microbiology

    2021  Volume 59, Issue 9, Page(s) e0298620

    Language English
    Publishing date 2021-08-18
    Publishing country United States
    Document type Journal Article
    ZDB-ID 390499-4
    ISSN 1098-660X ; 0095-1137
    ISSN (online) 1098-660X
    ISSN 0095-1137
    DOI 10.1128/JCM.02986-20
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Photo Quiz: A 45-Year-Old Man with Acute Unilateral Eye Pain.

    Lesaca, Julien / Pecoul, Thomas / Otto, Marie-Pierre / Combes, Emmanuel / Darles, Chrystelle / Benner, Patrick / Janvier, Frédéric

    Journal of clinical microbiology

    2021  Volume 59, Issue 9, Page(s) e0298520

    Language English
    Publishing date 2021-08-18
    Publishing country United States
    Document type Journal Article
    ZDB-ID 390499-4
    ISSN 1098-660X ; 0095-1137
    ISSN (online) 1098-660X
    ISSN 0095-1137
    DOI 10.1128/JCM.02985-20
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Posterior Oropharyngeal Saliva for the Detection of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2).

    Otto, Marie Pierre / Darles, Chrystelle / Valero, Elodie / Benner, Patrick / Dutasta, Fabien / Janvier, Frédéric

    Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

    2020  Volume 73, Issue 3, Page(s) 555–557

    MeSH term(s) COVID-19 ; Humans ; Oropharynx ; SARS-CoV-2 ; Saliva ; Specimen Handling
    Keywords covid19
    Language English
    Publishing date 2020-08-07
    Publishing country United States
    Document type Letter ; Research Support, Non-U.S. Gov't ; Comment
    ZDB-ID 1099781-7
    ISSN 1537-6591 ; 1058-4838
    ISSN (online) 1537-6591
    ISSN 1058-4838
    DOI 10.1093/cid/ciaa1181
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Influenza B false-positive results by rapid molecular tests Alere™ i Influenza A&B 2 in France.

    Otto, Marie Pierre / Toyer, Anne-Lise / Poggi, Cécile / Janvier, Frédéric

    Diagnostic microbiology and infectious disease

    2019  Volume 94, Issue 4, Page(s) 342–343

    Abstract: The Alere-i™ Influenza A&B (Abbott), a nicking endonuclease amplification reaction test, has recently been improved in order to deliver results in a few minutes. Our field observation highlights two problems with this new version: improper interpretation ...

    Abstract The Alere-i™ Influenza A&B (Abbott), a nicking endonuclease amplification reaction test, has recently been improved in order to deliver results in a few minutes. Our field observation highlights two problems with this new version: improper interpretation of a test as valid despite improper reagent hydration and falsely influenza B positive results. We advise users of the new system to check reagent hydration prior to reporting a result and to systematically confirm positive influenza B results.
    MeSH term(s) Adult ; False Positive Reactions ; France ; Humans ; Influenza B virus/genetics ; Influenza B virus/isolation & purification ; Influenza, Human/diagnosis ; Male ; Molecular Diagnostic Techniques/standards ; Nucleic Acid Amplification Techniques/standards ; Point-of-Care Systems/standards ; Predictive Value of Tests ; Reagent Kits, Diagnostic/standards ; Sensitivity and Specificity
    Chemical Substances Reagent Kits, Diagnostic
    Language English
    Publishing date 2019-03-13
    Publishing country United States
    Document type Case Reports ; Journal Article
    ZDB-ID 604920-5
    ISSN 1879-0070 ; 0732-8893
    ISSN (online) 1879-0070
    ISSN 0732-8893
    DOI 10.1016/j.diagmicrobio.2019.03.002
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Signatures of Life Detected in Images of Rocks Using Neural Network Analysis Demonstrate New Potential for Searching for Biosignatures on the Surface of Mars.

    Corenblit, Dov / Decaux, Olivier / Delmotte, Sébastien / Toumazet, Jean-Pierre / Arrignon, Florent / André, Marie-Françoise / Darrozes, José / Davies, Neil S / Julien, Frédéric / Otto, Thierry / Ramillien, Guillaume / Roussel, Erwan / Steiger, Johannes / Viles, Heather

    Astrobiology

    2023  Volume 23, Issue 3, Page(s) 308–326

    Abstract: Microorganisms play a role in the construction or modulation of various types of landforms. They are especially notable for forming microbially induced sedimentary structures (MISS). Such microbial structures have been considered to be among the most ... ...

    Abstract Microorganisms play a role in the construction or modulation of various types of landforms. They are especially notable for forming microbially induced sedimentary structures (MISS). Such microbial structures have been considered to be among the most likely biosignatures that might be encountered on the martian surface. Twenty-nine algorithms have been tested with images taken during a laboratory experiment for testing their performance in discriminating mat cracks (MISS) from abiotic mud cracks. Among the algorithms, neural network types produced excellent predictions with similar precision of 0.99. Following that step, a convolutional neural network (CNN) approach has been tested to see whether it can conclusively detect MISS in images of rocks and sediment surfaces taken at different natural sites where present and ancient (fossil) microbial mat cracks and abiotic desiccation cracks were observed. The CNN approach showed excellent prediction of biotic and abiotic structures from the images (global precision, sensitivity, and specificity, respectively, 0.99, 0.99, and 0.97). The key areas of interest of the machine matched well with human expertise for distinguishing biotic and abiotic forms (in their geomorphological meaning). The images indicated clear differences between the abiotic and biotic situations expressed at three embedded scales: texture (size, shape, and arrangement of the grains constituting the surface of one form), form (outer shape of one form), and pattern of form arrangement (arrangement of the forms over a few square meters). The most discriminative components for biogenicity were the border of the mat cracks with their tortuous enlarged and blistered morphology more or less curved upward, sometimes with thin laminations. To apply this innovative biogeomorphological approach to the images obtained by rovers on Mars, the main physical and biological sources of variation in abiotic and biotic outcomes must now be further considered.
    MeSH term(s) Humans ; Extraterrestrial Environment/chemistry ; Geologic Sediments/chemistry ; Mars ; Fossils ; Neural Networks, Computer ; Exobiology/methods
    Language English
    Publishing date 2023-01-20
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2047736-3
    ISSN 1557-8070 ; 1531-1074
    ISSN (online) 1557-8070
    ISSN 1531-1074
    DOI 10.1089/ast.2022.0034
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article: Posterior oropharyngeal salivafor the detection of SARS-CoV-2

    Otto, Marie Pierre / Darles, Chrystelle / Valero, Elodie / Benner, Patrick / Dutasta, Fabien / Janvier, Frédéric

    Clin. infect. dis

    Keywords covid19
    Publisher WHO
    Document type Article
    Note WHO #Covidence: #696407
    Database COVID19

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  10. Article ; Online: Posterior oropharyngeal salivafor the detection of SARS-CoV-2

    Otto, Marie Pierre / Darles, Chrystelle / Valero, Elodie / Benner, Patrick / Dutasta, Fabien / Janvier, Frédéric

    Clinical Infectious Diseases ; ISSN 1058-4838 1537-6591

    2020  

    Keywords Microbiology (medical) ; Infectious Diseases ; covid19
    Language English
    Publisher Oxford University Press (OUP)
    Publishing country uk
    Document type Article ; Online
    DOI 10.1093/cid/ciaa1181
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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