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  1. Article ; Online: Network pharmacology in quality control of traditional Chinese medicines.

    Wang, Ziyi / Li, Shao

    Chinese herbal medicines

    2022  Volume 14, Issue 4, Page(s) 477–478

    Language English
    Publishing date 2022-09-27
    Publishing country Singapore
    Document type Editorial
    ISSN 2589-3610
    ISSN (online) 2589-3610
    DOI 10.1016/j.chmed.2022.09.001
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Prolonged 3D culture unlocks black box of primate embryogenesis.

    Li, Ziyi / Zhou, Fan

    Cell stem cell

    2023  Volume 30, Issue 7, Page(s) 911–912

    Abstract: By developing in vitro 3D culture systems and identifying morphological and molecular events of early organogenesis, two recent ... ...

    Abstract By developing in vitro 3D culture systems and identifying morphological and molecular events of early organogenesis, two recent studies
    MeSH term(s) Animals ; Embryonic Development ; Organogenesis ; Primates ; Embryo, Mammalian
    Language English
    Publishing date 2023-07-06
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2375354-7
    ISSN 1875-9777 ; 1934-5909
    ISSN (online) 1875-9777
    ISSN 1934-5909
    DOI 10.1016/j.stem.2023.06.004
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: One step forward for nanopore protein sequencing.

    Li, Ziyi / Yi, Yakun / Liu, Lei / Wu, Hai-Chen

    Clinical and translational medicine

    2024  Volume 14, Issue 3, Page(s) e1615

    MeSH term(s) Humans ; Nanopores ; High-Throughput Nucleotide Sequencing
    Language English
    Publishing date 2024-03-12
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2697013-2
    ISSN 2001-1326 ; 2001-1326
    ISSN (online) 2001-1326
    ISSN 2001-1326
    DOI 10.1002/ctm2.1615
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: A Complete Genome Sequence of

    Wang, Ziyi / Du, Yujiao / Li, Suhao / Xu, Xuewen / Chen, Xuehao

    Pathogens (Basel, Switzerland)

    2023  Volume 12, Issue 4

    Abstract: Podosphaera ... ...

    Abstract Podosphaera xanthii
    Language English
    Publishing date 2023-04-06
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2695572-6
    ISSN 2076-0817
    ISSN 2076-0817
    DOI 10.3390/pathogens12040561
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Predicting the effect of chemicals on fruit using graph neural networks.

    Han, Junming / Li, Tong / He, Yun / Yang, Ziyi

    Scientific reports

    2024  Volume 14, Issue 1, Page(s) 8203

    Abstract: The neural network method is a type of machine learning that has made significant advances over the past few years in a variety of fields, particularly text, speech, images, videos, etc. In areas where data is unstructured, traditional machine learning ... ...

    Abstract The neural network method is a type of machine learning that has made significant advances over the past few years in a variety of fields, particularly text, speech, images, videos, etc. In areas where data is unstructured, traditional machine learning has not been able to surpass the 'glass ceiling'; therefore, researchers have turned to neural networks as auxiliary tools to achieve significant breakthroughs or develop new research methods. An array of computational chemistry challenges can be addressed using neural networks, including virtual screening, quantitative structure-activity relationships, protein structure prediction, materials design, quantum chemistry, and property prediction, among others. This paper proposes a strategy for predicting the chemical properties of fruits by using graph neural networks, and it aims to provide some guidance to researchers and streamline the identification process.
    MeSH term(s) Fruit ; Neural Networks, Computer ; Machine Learning ; Quantitative Structure-Activity Relationship
    Language English
    Publishing date 2024-04-08
    Publishing country England
    Document type Journal Article
    ZDB-ID 2615211-3
    ISSN 2045-2322 ; 2045-2322
    ISSN (online) 2045-2322
    ISSN 2045-2322
    DOI 10.1038/s41598-024-58991-y
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Exercise couples mitochondrial function with skeletal muscle fiber type via ROS-mediated epigenetic modification.

    Li, Jialin / Zhang, Ziyi / Bo, Hai / Zhang, Yong

    Free radical biology & medicine

    2024  Volume 213, Page(s) 409–425

    Abstract: Skeletal muscle is a heterogeneous tissue composed of different types of muscle fibers, demonstrating substantial plasticity. Physiological or pathological stimuli can induce transitions in muscle fiber types. However, the precise regulatory mechanisms ... ...

    Abstract Skeletal muscle is a heterogeneous tissue composed of different types of muscle fibers, demonstrating substantial plasticity. Physiological or pathological stimuli can induce transitions in muscle fiber types. However, the precise regulatory mechanisms behind these transitions remains unclear. This paper reviews the classification and characteristics of muscle fibers, along with the classical mechanisms of muscle fiber type transitions. Additionally, the role of exercise-induced muscle fiber type transitions in disease intervention is reviewed. Epigenetic pathways mediate cellular adaptations and thus represent potential targets for regulating muscle fiber type transitions. This paper focuses on the mechanisms by which epigenetic modifications couple mitochondrial function and contraction characteristics. Reactive Oxygen Species (ROS) are critical signaling regulators for the health-promoting effects of exercise. Finally, we discuss the role of exercise-induced ROS in regulating epigenetic modifications and the transition of muscle fiber types.
    MeSH term(s) Reactive Oxygen Species/metabolism ; Muscle Fibers, Skeletal/metabolism ; Mitochondria/metabolism ; Muscle, Skeletal/metabolism ; Epigenesis, Genetic
    Chemical Substances Reactive Oxygen Species
    Language English
    Publishing date 2024-01-29
    Publishing country United States
    Document type Review ; Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 807032-5
    ISSN 1873-4596 ; 0891-5849
    ISSN (online) 1873-4596
    ISSN 0891-5849
    DOI 10.1016/j.freeradbiomed.2024.01.036
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: Opinion: Auxiliary Role of Medical Imaging Technology in Clinical Surgery.

    Ziyi, Zhang / Shuang, Li / Shihao, Zhao / Zhikai, Zuo / Yunrun, Liu

    Frontiers in surgery

    2022  Volume 9, Page(s) 913427

    Language English
    Publishing date 2022-05-02
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2773823-1
    ISSN 2296-875X
    ISSN 2296-875X
    DOI 10.3389/fsurg.2022.913427
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Correction: IRS-1 increases TAZ expression and promotes osteogenic differentiation in rat bone marrow mesenchymal stem cells.

    Wang, Na / Xue, Peng / Li, Ziyi / Li, Yukun

    Biology open

    2023  Volume 12, Issue 1

    Language English
    Publishing date 2023-01-12
    Publishing country England
    Document type Published Erratum
    ZDB-ID 2632264-X
    ISSN 2046-6390 ; 2046-6390
    ISSN (online) 2046-6390
    ISSN 2046-6390
    DOI 10.1242/bio.059772
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article: Potential antidepressant effects of Traditional Chinese botanical drug formula Chaihu-Shugan-San and its active ingredients.

    Guo, Ziyi / Long, Tianjian / Yao, Jianping / Li, Yamin / Xiao, Lu / Chen, Min

    Frontiers in pharmacology

    2024  Volume 15, Page(s) 1337876

    Abstract: Background: ...

    Abstract Background:
    Language English
    Publishing date 2024-04-02
    Publishing country Switzerland
    Document type Journal Article ; Review
    ZDB-ID 2587355-6
    ISSN 1663-9812
    ISSN 1663-9812
    DOI 10.3389/fphar.2024.1337876
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Chemical component of differences in the endosperm of

    Lu, Guanglei / Ren, Tingyuan / Zhao, Ziyi / Li, Bei / Tan, Shuming

    Food chemistry: X

    2023  Volume 21, Page(s) 101060

    Abstract: To investigate the chemical composition and interfunctional differences among the endosperm ... ...

    Abstract To investigate the chemical composition and interfunctional differences among the endosperm of
    Language English
    Publishing date 2023-12-12
    Publishing country Netherlands
    Document type Journal Article
    ISSN 2590-1575
    ISSN (online) 2590-1575
    DOI 10.1016/j.fochx.2023.101060
    Database MEDical Literature Analysis and Retrieval System OnLINE

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