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  1. Article ; Online: Increasing abdominal aortic aneurysm curvature visibility using 3D dual probe bistatic ultrasound imaging combined with probe translation.

    Jansen, Larissa C / Fekkes, Stein / Schwab, Hans-Martin / Lopata, Richard G P

    Ultrasonics

    2024  Volume 139, Page(s) 107284

    Abstract: High frame rate ultrasound (US) imaging techniques in 3D are promising tools for capturing abdominal aortic aneurysms (AAAs) over time, however, with the limited number of channel-to-element connections current footprints are small, which limits the ... ...

    Abstract High frame rate ultrasound (US) imaging techniques in 3D are promising tools for capturing abdominal aortic aneurysms (AAAs) over time, however, with the limited number of channel-to-element connections current footprints are small, which limits the field of view. Moreover, the maximal steering angle of the ultrasound beams in transmit and the maximal receptance angle in receive are insufficient for capturing the curvy shape of the AAA. Therefore, an approach is needed towards large arrays. In this study, high frame rate bistatic 3D US data (17 Hz) were acquired with two synchronized matrix arrays positioned at different locations (multi-aperture imaging) using a translation stage to simulate what a larger array with limited channel-to-element connections can potentially achieve. Acquisitions were performed along an AAA shaped phantom with different probe tilting angles (0 up to ± 30°). The performance of different multi-aperture configurations was quantified using the generalized contrast-to-noise ratio of the wall and lumen (gCNR). Furthermore, a parametric model of the multi-aperture system was used to estimate in which AAA wall regions the contrast is expected to be high. This was evaluated for AAAs with increasing diameters and curvature. With an eight-aperture 0° probe angle configuration a 69 % increase in field of view was measured in the longitudinal direction compared to the field of view of a single aperture configuration. When increasing the number of apertures from two to eight, the gCNR improved for the upper wall and lower wall by 35 % and 13 % (monostatic) and by 36 % and 13 % (bistatic). Contrast improvements up to 22 % (upper wall) and 12 % (lower wall) are achieved with tilted probe configurations compared to non-tilted configurations. Moreover, with bistatic imaging with tilted probe configurations gCNR improvements up to 4 % (upper wall) and 7 % (lower wall) are achieved compared to monostatic imaging. Furthermore, imaging with a larger inter-probe distance improved the gCNR for a ± 15° probe angle configuration. The gCNR has an expected pattern over time, where the contrast is lower when there is more wall motion (systole) and higher when motion is reduced (diastole). Furthermore, a higher frame rate (45 Hz) yields a lower gCNR, because fewer compound angles are used. The results of the parametric model suggest that a flat array is suitable for imaging AAA shapes with limited curvature, but that it is not suitable for imaging larger AAA shapes with more curvature. According to the model, tilted multi-aperture configurations combined with bistatic imaging can achieve a larger region with high contrast compared to non-tilted configurations. The findings of the model are in agreement with experimental findings. To conclude, this study demonstrates the vast improvements in field of view and AAA wall visibility that a large, sparsely populated 3D array can potentially achieve when imaging AAAs compared to single or dual aperture imaging. In the future, larger arrays, less thermal noise, more steering, and more channel-to-element connections combined with carefully chosen orientations of (sub-) apertures will likely advance 3D imaging of AAAs.
    MeSH term(s) Humans ; Imaging, Three-Dimensional/methods ; Aortic Aneurysm, Abdominal/diagnostic imaging ; Ultrasonography/methods
    Language English
    Publishing date 2024-03-02
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 200839-7
    ISSN 1874-9968 ; 0041-624X
    ISSN (online) 1874-9968
    ISSN 0041-624X
    DOI 10.1016/j.ultras.2024.107284
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  2. Article ; Online: Effective Components of Social Skills Training Programs for Children and Adolescents in Nonclinical Samples: A Multilevel Meta-analysis.

    de Mooij, Brechtje / Fekkes, Minne / Scholte, Ron H J / Overbeek, Geertjan

    Clinical child and family psychology review

    2020  Volume 23, Issue 2, Page(s) 250–264

    Abstract: ... in nonclinical samples: d = .369, 95% CI [.292, .447], p < .001. This effect was positively influenced ...

    Abstract Social skills training (SST) programs for nonclinical children and adolescents are known to have positive effects on social skills, but it remains unclear how distinct training components are related to program effects. This multilevel meta-analysis examines how psychoeducation (i.e., exercises aimed at the transfer of knowledge), psychophysical components (i.e., physical exercises aimed at improving self-confidence and trust in others), skill-building components (i.e., exercises aimed at improving interpersonal skills), and cognitive-emotional components (i.e., exercises aimed at changing emotions and cognitions) are independently related to SST program effects. We extracted data from 97 articles describing 839 effect sizes. Training content data were extracted from 60 corresponding SST programs. Our results showed that SST programs had a positive effect on the development of interpersonal skills and emotional skills in nonclinical samples: d = .369, 95% CI [.292, .447], p < .001. This effect was positively influenced by the inclusion of psychoeducation and skill-building components. The inclusion of psychophysical components and the number of cognitive-emotional components did not influence program effects. For psychoeducation and skill-building components, we observed a curvilinear relationship between intensity and effect size: programs including three to six psychoeducational exercises yielded larger effect sizes compared to programs with more or fewer psychoeducational exercises, and programs with 11 to 20 skill-building exercises outperformed programs with more or fewer skill-building exercises. These findings are an indication that psychoeducational components and skill-building components are related to larger SST program effects, granted that the dosage is right.
    MeSH term(s) Adolescent ; Child ; Emotions ; Humans ; Social Skills
    Language English
    Publishing date 2020-01-09
    Publishing country United States
    Document type Journal Article ; Meta-Analysis ; Research Support, Non-U.S. Gov't ; Review
    ZDB-ID 1445774-x
    ISSN 1573-2827 ; 1096-4037
    ISSN (online) 1573-2827
    ISSN 1096-4037
    DOI 10.1007/s10567-019-00308-x
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Amelioration of the effects of obesity on short-term postoperative complications of laparoscopic and open ventral hernia repair.

    Fekkes, Jort F / Velanovich, Vic

    Surgical laparoscopy, endoscopy & percutaneous techniques

    2015  Volume 25, Issue 2, Page(s) 151–157

    Abstract: ... group (P<0.01). The mean total OT was 77.9 minutes in the OVHR group, compared with 87.9 minutes LVHR ...

    Abstract Background: Recent studies indicate that laparoscopic ventral hernia repair has a lower incidence of postoperative surgical site infections (SSI) and length of stay (LOS). There is limited literature evaluating postoperative SSI, LOS, blood loss, and operation time (OT) in obese patients. The objective of this study was to compare postoperative SSI, LOS, blood loss, and OT in obese patients undergoing laparoscopic and open ventral hernia repair (OVHR).
    Materials and methods: The American College of Surgeons National Surgery Quality Improvement Program (ACS-NSQIP) Participant Use File (PUF) from 2011 was used to identify patients with OVHR and laparoscopic ventral hernia repair (LVHR). Postoperative SSI, OT, LOS, and blood loss were analyzed and compared in the different patient groups using univariate and multivariate analyses.
    Results: A total of 12,004 patients who underwent ventral hernia repair were included in the study. The distribution of repair types were: 6537 (54.5%) reducible OVHR, 2749 (22.9%) incarcerated OVHR, 1767 (14.7%) reducible LVHR, and 763 (6.4%) incarcerated LVHR. Of the patients with body mass index (BMI) >30 kg/m 113 (3.4%) developed superficial SSI in the OVHR group compared with 7 (0.72%) of the patients in the LVHR group (P<0.01). The mean total OT was 77.9 minutes in the OVHR group, compared with 87.9 minutes LVHR for patients with BMI<25 kg/m. In the highest BMI class of >40 kg/m, OT was not significantly different between the groups. The mean LOS increased in OVHR group from 2.4 days in patients with BMI<25 kg/m to 3.7 days in patients with BMI>40 kg/m. In contrast, in the LVHR group, the LOS was decreased from a mean of 3.2 days in patients with BMI<25 kg/m to 1.9 days in patients with BMI>40 kg/m.
    Conclusions: LVHR repair is related to a decreased risk for superficial SSI's and LOS in obese patients, without extending OT.
    MeSH term(s) Body Mass Index ; Female ; Florida/epidemiology ; Follow-Up Studies ; Hernia, Ventral/complications ; Hernia, Ventral/surgery ; Herniorrhaphy/methods ; Humans ; Incidence ; Laparoscopy ; Laparotomy ; Length of Stay/trends ; Male ; Middle Aged ; Obesity/complications ; Operative Time ; Postoperative Complications/epidemiology ; Postoperative Complications/etiology ; Postoperative Complications/prevention & control ; Prognosis ; Recurrence ; Retrospective Studies ; Risk Factors ; Time Factors
    Language English
    Publishing date 2015-04
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1475108-2
    ISSN 1534-4908 ; 1530-4515 ; 1051-7200
    ISSN (online) 1534-4908
    ISSN 1530-4515 ; 1051-7200
    DOI 10.1097/SLE.0000000000000100
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  4. Article ; Online: Biochemical and structural basis for the pharmacological inhibition of nuclear hormone receptor PPARγ by inverse agonists.

    Irwin, Sean / Karr, Craig / Furman, Craig / Tsai, Jennifer / Gee, Patricia / Banka, Deepti / Wibowo, Ardian S / Dementiev, Alexey A / O'Shea, Morgan / Yang, Joyce / Lowe, Jason / Mitchell, Lorna / Ruppel, Sabine / Fekkes, Peter / Zhu, Ping / Korpal, Manav / Larsen, Nicholas A

    The Journal of biological chemistry

    2022  Volume 298, Issue 11, Page(s) 102539

    Abstract: Recent studies have reported that the peroxisome proliferator-activated receptor gamma (PPARγ) pathway is activated in approximately 40% of patients with muscle-invasive bladder cancer. This led us to investigate pharmacological repression of PPARγ as a ... ...

    Abstract Recent studies have reported that the peroxisome proliferator-activated receptor gamma (PPARγ) pathway is activated in approximately 40% of patients with muscle-invasive bladder cancer. This led us to investigate pharmacological repression of PPARγ as a possible intervention strategy. Here, we characterize PPARγ antagonists and inverse agonists and find that the former behave as silent ligands, whereas inverse agonists (T0070907 and SR10221) repress downstream PPARγ target genes leading to growth inhibition in bladder cancer cell lines. To understand the mechanism, we determined the ternary crystal structure of PPARγ bound to T0070907 and the corepressor (co-R) peptide NCOR1. The structure shows that the AF-2 helix 12 (H12) rearranges to bind inside the ligand-binding domain, where it forms stabilizing interactions with the compound. This dramatic movement in H12 unveils a large interface for co-R binding. In contrast, the crystal structure of PPARγ bound to a SR10221 analog shows more subtle structural differences, where the compound binds and pushes H12 away from the ligand-binding domain to allow co-R binding. Interestingly, we found that both classes of compound promote recruitment of co-R proteins in biochemical assays but with distinct conformational changes in H12. We validate our structural models using both site-directed mutagenesis and chemical probes. Our findings offer new mechanistic insights into pharmacological modulation of PPARγ signaling.
    MeSH term(s) Humans ; PPAR gamma/metabolism ; Ligands ; Urinary Bladder Neoplasms ; Benzamides/pharmacology
    Chemical Substances PPAR gamma ; T 0070907 ; Ligands ; Benzamides
    Language English
    Publishing date 2022-09-28
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2997-x
    ISSN 1083-351X ; 0021-9258
    ISSN (online) 1083-351X
    ISSN 0021-9258
    DOI 10.1016/j.jbc.2022.102539
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  5. Article ; Online: Zelfredzaamheid van jongeren met Down-syndroom.

    van Gameren-Oosterom, Helma M B / Fekkes, Minne / Oudesluys-Murphy, Anne Marie / van Wouwe, Jacobus P

    Nederlands tijdschrift voor geneeskunde

    2014  Volume 158, Page(s) A7983

    Abstract: Objective: To determine the level of independence and social functioning in young people with Down syndrome.: Design: Cross-sectional study.: Method: Via the Dutch Down Syndrome Foundation (Stichting Downsyndroom), we asked parents of children ... ...

    Title translation Young people with Down syndrome: independence and social functioning.
    Abstract Objective: To determine the level of independence and social functioning in young people with Down syndrome.
    Design: Cross-sectional study.
    Method: Via the Dutch Down Syndrome Foundation (Stichting Downsyndroom), we asked parents of children with Down syndrome born in 1992, 1993 or 1994 to complete a written questionnaire about their child. This questionnaire contained the following standardised lists: the 'Dutch social competence rating scale for people with a learning disability', the 'Child behaviour checklist' and the 'Children's social behaviour questionnaire', and additional questions on background characteristics. The results of this Dutch cohort were compared with available data on peers without Down syndrome.
    Results: Data from 322 young people with Down syndrome, mean age 18.4 years (range 16.8-19.9 years), were collected (response 63%). Almost 60% of participants mastered basic skills of independent functioning, such as maintaining adequate standards of personal hygiene, preparing breakfast and being able to spend at least 30 minutes at home alone. About 10% of the participants had basic skills such as cooking and paying in a shop. Nine out of ten participants had more problems with social functioning than peers without Down syndrome, mainly with social interaction, processing information and regulating their emotions. Half of the participants had clinically relevant behavioural problems.
    Conclusion: The results of this study show that young people with Down syndrome have limited practical and social skills, and more behavioural problems than their peers without Down syndrome. In daily life they are to a greater or lesser extent dependent on others, and need lifelong support.
    MeSH term(s) Activities of Daily Living ; Adolescent ; Case-Control Studies ; Cross-Sectional Studies ; Down Syndrome/psychology ; Female ; Humans ; Independent Living ; Interpersonal Relations ; Male ; Social Adjustment ; Social Behavior ; Social Skills ; Surveys and Questionnaires ; Young Adult
    Language Dutch
    Publishing date 2014
    Publishing country Netherlands
    Document type English Abstract ; Journal Article
    ZDB-ID 82073-8
    ISSN 1876-8784 ; 0028-2162
    ISSN (online) 1876-8784
    ISSN 0028-2162
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  6. Article ; Online: The tryptophan kynurenine pathway, neopterin and IL-6 during vulvectomy and abdominal hysterectomy.

    Hol, Jaap Willem / Stolker, Robert J / Klimek, Markus / Stronks, Dirk L / Fekkes, Durk

    Journal of biomedical science

    2014  Volume 21, Page(s) 102

    Abstract: ... as measured by the kynurenine/tryptophan ratio (P=0.003), while maintaining stable neopterin levels ... However, abdominal hysterectomy causes a considerable IL-6 increase (P<0.001).: Conclusion: Surgery and associated ...

    Abstract Background: Surgery has wide ranging immunomodulatory properties of which the mechanism is poorly understood. In order to investigate how different types of surgery influence inflammation, we designed a longitudinal observational study investigating two inflammatory profiles of two separate patient groups undergoing gynaecological operations of differing severity. In addition to measuring the well known inflammatory markers neopterin and IL-6, we also determined the kynurenine/tryptophan ratio. This study was a prospective, single center, two-armed observational study involving 28 female patients. Plasma levels of tryptophan, kynurenine, neopterin and IL-6 were determined from samples taken at: 24 hrs pre-operative, prior to induction, ten minutes before the operation was expected to end, and at 24 and 96 hours post operative in patients undergoing abdominal hysterectomy and vulvectomy.
    Results: There were 15 and 13 patients included in the vulvectomy and abdominal hysterectomy groups, respectively. In this study we show that anesthesia and surgery significantly increases the enzyme activity of indoleamine 2, 3 dioxygenase (IDO) as measured by the kynurenine/tryptophan ratio (P=0.003), while maintaining stable neopterin levels. However, abdominal hysterectomy causes a considerable IL-6 increase (P<0.001).
    Conclusion: Surgery and associated anesthesia cause a significant tryptophan level decrease while significantly increasing IDO activity. Both types of surgery produce nearly identical neopterin time curve relationships, with no significant change occurring in either group. However, even though neopterin is unaffected by the severity of surgery, IL-6 responded to surgical invasiveness by revealing a significant increase during abdominal hysterectomy.
    MeSH term(s) Adult ; Aged ; Biomarkers/blood ; Female ; Humans ; Hysterectomy ; Inflammation/blood ; Interleukin-6/blood ; Kynurenine/blood ; Middle Aged ; Neopterin/blood ; Prospective Studies ; Tryptophan/blood ; Vulva/surgery
    Chemical Substances Biomarkers ; Interleukin-6 ; Kynurenine (343-65-7) ; Neopterin (670-65-5) ; Tryptophan (8DUH1N11BX)
    Language English
    Publishing date 2014-12-20
    Publishing country England
    Document type Journal Article ; Observational Study
    ZDB-ID 1193378-1
    ISSN 1423-0127 ; 1021-7770
    ISSN (online) 1423-0127
    ISSN 1021-7770
    DOI 10.1186/s12929-014-0102-2
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  7. Article ; Online: Structural Basis of Splicing Modulation by Antitumor Macrolide Compounds.

    Cretu, Constantin / Agrawal, Anant A / Cook, Andrew / Will, Cindy L / Fekkes, Peter / Smith, Peter G / Lührmann, Reinhard / Larsen, Nicholas / Buonamici, Silvia / Pena, Vladimir

    Molecular cell

    2018  Volume 70, Issue 2, Page(s) 265–273.e8

    Abstract: SF3B is a multi-protein complex essential for branch site (BS) recognition and selection during pre-mRNA splicing. Several splicing modulators with antitumor activity bind SF3B and thereby modulate splicing. Here we report the crystal structure of a ... ...

    Abstract SF3B is a multi-protein complex essential for branch site (BS) recognition and selection during pre-mRNA splicing. Several splicing modulators with antitumor activity bind SF3B and thereby modulate splicing. Here we report the crystal structure of a human SF3B core in complex with pladienolide B (PB), a macrocyclic splicing modulator and potent inhibitor of tumor cell proliferation. PB stalls SF3B in an open conformation by acting like a wedge within a hinge, modulating SF3B's transition to the closed conformation needed to form the BS adenosine-binding pocket and stably accommodate the BS/U2 duplex. This work explains the structural basis for the splicing modulation activity of PB and related compounds, and reveals key interactions between SF3B and a common pharmacophore, providing a framework for future structure-based drug design.
    MeSH term(s) Adenosine/metabolism ; Animals ; Antineoplastic Agents/chemistry ; Antineoplastic Agents/metabolism ; Antineoplastic Agents/pharmacology ; Binding Sites ; Carrier Proteins/metabolism ; Cell Proliferation/drug effects ; Drug Design ; Epoxy Compounds/chemistry ; Epoxy Compounds/metabolism ; Epoxy Compounds/pharmacology ; HCT116 Cells ; HeLa Cells ; Humans ; Macrolides/chemistry ; Macrolides/metabolism ; Macrolides/pharmacology ; Models, Molecular ; Multiprotein Complexes ; Phosphoproteins/chemistry ; Phosphoproteins/genetics ; Phosphoproteins/metabolism ; Protein Binding ; Protein Conformation ; RNA Precursors/genetics ; RNA Precursors/metabolism ; RNA Splicing/drug effects ; RNA Splicing Factors/chemistry ; RNA Splicing Factors/genetics ; RNA Splicing Factors/metabolism ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Sf9 Cells ; Structure-Activity Relationship
    Chemical Substances Antineoplastic Agents ; Carrier Proteins ; Epoxy Compounds ; Macrolides ; Multiprotein Complexes ; PHF5A protein, human ; Phosphoproteins ; RNA Precursors ; RNA Splicing Factors ; RNA, Messenger ; SF3B1 protein, human ; pladienolide B ; Adenosine (K72T3FS567)
    Language English
    Publishing date 2018-04-12
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1415236-8
    ISSN 1097-4164 ; 1097-2765
    ISSN (online) 1097-4164
    ISSN 1097-2765
    DOI 10.1016/j.molcel.2018.03.011
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  8. Article ; Online: Mainstream and special school attendance among a Dutch cohort of children with Down Syndrome.

    van Wouwe, Jacobus P / van Gameren-Oosterom, Helma B M / Verkerk, Paul H / van Dommelen, Paula / Fekkes, Minne

    PloS one

    2014  Volume 9, Issue 3, Page(s) e91737

    Abstract: Object: To determine the level of mainstream education in a nationwide cohort of adolescents with Down Syndrome (DS), and to find characteristics related to mainstream or special school attendance.: Method: Dutch children with DS born in 1992, 1993 ... ...

    Abstract Object: To determine the level of mainstream education in a nationwide cohort of adolescents with Down Syndrome (DS), and to find characteristics related to mainstream or special school attendance.
    Method: Dutch children with DS born in 1992, 1993 or 1994, were assessed when 16-19 years old. Parents scored school enrolment between the age of 4-18 years, general characteristics and the levels of intellectual disability using the Dutch Social Competence Rating Scale. Associations between disability and years in mainstream school were assessed by ordinal logistic regression, adjusting for sex and parental education.
    Results: We collected data from 170 boys and 152 girls (response 63%); mean age 18.3 years (ranges 16.8-19.9). Intellectual disability was mostly moderate (43%). Most children (74%) entered mainstream education between 4 and 6 years of age. At 13 years 17% was in mainstream school and 7% stayed in up to 16 years. From the age of 8 years onwards the majority was in special education, while 6% never attended school. Girls were more often in mainstream school and stayed in longer. Level of disability was significantly associated with number of years in mainstream education.
    Conclusion: Three out of four Dutch children with DS entered mainstream primary education, however late entry and high dropout are common.
    MeSH term(s) Adolescent ; Child ; Cohort Studies ; Cross-Sectional Studies ; Down Syndrome/epidemiology ; Education of Intellectually Disabled ; Female ; Humans ; Mainstreaming, Education ; Male ; Netherlands/epidemiology ; Parents ; Young Adult
    Language English
    Publishing date 2014-03-17
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ISSN 1932-6203
    ISSN (online) 1932-6203
    DOI 10.1371/journal.pone.0091737
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  9. Article: Protein targeting to the bacterial cytoplasmic membrane.

    Fekkes, P / Driessen, A J

    Microbiology and molecular biology reviews : MMBR

    1999  Volume 63, Issue 1, Page(s) 161–173

    Abstract: Proteins that perform their activity within the cytoplasmic membrane or outside this cell boundary must be targeted to the translocation site prior to their insertion and/or translocation. In bacteria, several targeting routes are known; the SecB- and ... ...

    Abstract Proteins that perform their activity within the cytoplasmic membrane or outside this cell boundary must be targeted to the translocation site prior to their insertion and/or translocation. In bacteria, several targeting routes are known; the SecB- and the signal recognition particle-dependent pathways are the best characterized. Recently, evidence for the existence of a third major route, the twin-Arg pathway, was gathered. Proteins that use either one of these three different pathways possess special features that enable their specific interaction with the components of the targeting routes. Such targeting information is often contained in an N-terminal extension, the signal sequence, but can also be found within the mature domain of the targeted protein. Once the nascent chain starts to emerge from the ribosome, competition for the protein between different targeting factors begins. After recognition and binding, the targeting factor delivers the protein to the translocation sites at the cytoplasmic membrane. Only by means of a specific interaction between the targeting component and its receptor is the cargo released for further processing and translocation. This mechanism ensures the high-fidelity targeting of premembrane and membrane proteins to the translocation site.
    MeSH term(s) Bacterial Outer Membrane Proteins/metabolism ; DNA-Binding Proteins/metabolism ; Drosophila Proteins ; Gram-Positive Bacteria/chemistry ; Gram-Positive Bacteria/metabolism ; Peptidyl Transferases/metabolism ; Transcription Factors/metabolism
    Chemical Substances Bacterial Outer Membrane Proteins ; DNA-Binding Proteins ; Drosophila Proteins ; Transcription Factors ; Peptidyl Transferases (EC 2.3.2.12)
    Language English
    Publishing date 1999-03
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Review
    ZDB-ID 1376131-6
    ISSN 1098-5557 ; 1070-6275 ; 1092-2172
    ISSN (online) 1098-5557 ; 1070-6275
    ISSN 1092-2172
    DOI 10.1128/MMBR.63.1.161-173.1999
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  10. Article ; Online: The R882H DNMT3A hot spot mutation stabilizes the formation of large DNMT3A oligomers with low DNA methyltransferase activity.

    Nguyen, Tuong-Vi / Yao, Shihua / Wang, Yahong / Rolfe, Alan / Selvaraj, Anand / Darman, Rachel / Ke, Jiyuan / Warmuth, Markus / Smith, Peter G / Larsen, Nicholas A / Yu, Lihua / Zhu, Ping / Fekkes, Peter / Vaillancourt, Frédéric H / Bolduc, David M

    The Journal of biological chemistry

    2019  Volume 294, Issue 45, Page(s) 16966–16977

    Abstract: DNMT3A (DNA methyltransferase 3A) is ... ...

    Abstract DNMT3A (DNA methyltransferase 3A) is a
    MeSH term(s) DNA/metabolism ; DNA (Cytosine-5-)-Methyltransferases/chemistry ; DNA (Cytosine-5-)-Methyltransferases/genetics ; DNA (Cytosine-5-)-Methyltransferases/metabolism ; Humans ; Models, Molecular ; Mutation ; Protein Multimerization ; Protein Structure, Quaternary
    Chemical Substances DNA (9007-49-2) ; DNA (Cytosine-5-)-Methyltransferases (EC 2.1.1.37) ; DNA methyltransferase 3A (EC 2.1.1.37)
    Language English
    Publishing date 2019-10-03
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2997-x
    ISSN 1083-351X ; 0021-9258
    ISSN (online) 1083-351X
    ISSN 0021-9258
    DOI 10.1074/jbc.RA119.010126
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