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  1. Article: Short hydrocarbon stapled ApoC2-mimetic peptides activate lipoprotein lipase and lower plasma triglycerides in mice.

    Sviridov, Denis / Dasseux, Amaury / Reimund, Mart / Pryor, Milton / Drake, Steven K / Jarin, Zack / Wolska, Anna / Pastor, Richard W / Remaley, Alan T

    Frontiers in cardiovascular medicine

    2023  Volume 10, Page(s) 1223920

    Abstract: Introduction: Defects in lipolysis can lead to hypertriglyceridemia, which can trigger acute pancreatitis and is also associated with cardiovascular disease. Decreasing plasma triglycerides (TGs) by activating lipoprotein lipase (LPL) with ApoC2 mimetic ...

    Abstract Introduction: Defects in lipolysis can lead to hypertriglyceridemia, which can trigger acute pancreatitis and is also associated with cardiovascular disease. Decreasing plasma triglycerides (TGs) by activating lipoprotein lipase (LPL) with ApoC2 mimetic peptides is a new treatment strategy for hypertriglyceridemia. We recently described a dual ApoC2 mimetic/ApoC3 antagonist peptide called D6PV that effectively lowered TG in several mouse models but has limitations in terms of drug development. The aim of this study was to create the next generation of ApoC2 mimetic peptides.
    Methods: We employed hydrocarbon staples, as well as select amino acid substitutions, to make short single helical mimetic peptides based on the last helix of ApoC2. Peptides were first tested for their ability to activate LPL and then in hypertriglyceridemia mouse models. All-atom simulations of peptides were performed in a lipid-trilayer model of TG-rich lipoproteins to discern their possible mechanism of action.
    Results: We designed a single stapled peptide called SP1 (21 residues), and a double stapled (stitched) peptide called SP2 (21 residues) and its N-terminal acylated analogue, SP2a. The hydrocarbon staples increased the amphipathicity of the peptides and their ability to bind lipids without interfering with LPL activation. Indeed, from all-atom simulations, the conformations of SP1 and SP2a are restrained by the staples and maintains the proper orientation of the LPL activation motif, while still allowing their deeper insertion into the lipid-trilayer model. Intraperitoneal injection of stapled peptides (1-5 umoles/kg) into ApoC2-hypomorphic mice or human ApoC3-transgenic resulted in an 80%-90% reduction in plasma TG within 3 h, similar to the much longer D6PV peptide (41 residues). Other modifications (replacement L-Glu20, L-Glu21 with their D-isomers, N-methylation of Gly19, Met2NorLeu and Ala1alpha-methylAla substitutions, N-terminal octanoylation) were introduced into the SP2a peptide. These changes made SP2a highly resistant to proteolysis against trypsin, pepsin, and Proteinase K, while maintaining similar efficacy in lowering plasma TG in mice.
    Conclusion: We describe a new generation of ApoC2 mimetic peptides based on hydron carbon stapling that are at least equally potent to earlier peptides but are much shorter and resistant to proteolysis and could be further developed into a new therapy for hypertriglyceridemia.
    Language English
    Publishing date 2023-07-21
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2781496-8
    ISSN 2297-055X
    ISSN 2297-055X
    DOI 10.3389/fcvm.2023.1223920
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Hepatitis C virus E1 recruits high-density lipoprotein to support infectivity and evade antibody recognition.

    Casiano Matos, Jennifer / Harichandran, Kaneemozhe / Tang, Jingrong / Sviridov, Denis O / Sidoti Migliore, Giacomo / Suzuki, Motoshi / Olano, Lisa R / Hobbs, Alvaro / Kumar, Ashish / Paskel, Myeisha U / Bonsignori, Mattia / Dearborn, Altaira D / Remaley, Alan T / Marcotrigiano, Joseph

    Journal of virology

    2024  Volume 98, Issue 1, Page(s) e0084923

    Abstract: Hepatitis C virus (HCV) is a member of ... ...

    Abstract Hepatitis C virus (HCV) is a member of the
    MeSH term(s) Humans ; Antibodies, Monoclonal/immunology ; Antibodies, Neutralizing/immunology ; Apolipoproteins/metabolism ; Hepacivirus/pathogenicity ; Hepatitis C/immunology ; Hepatitis C/virology ; Hepatitis C Antibodies/immunology ; Lipoproteins, HDL/metabolism ; Lipoproteins, LDL/metabolism ; Viral Envelope Proteins/metabolism ; Immune Evasion ; HEK293 Cells
    Chemical Substances Antibodies, Monoclonal ; Antibodies, Neutralizing ; Apolipoproteins ; Hepatitis C Antibodies ; Lipoproteins, HDL ; Lipoproteins, LDL ; Viral Envelope Proteins
    Language English
    Publishing date 2024-01-04
    Publishing country United States
    Document type Journal Article
    ZDB-ID 80174-4
    ISSN 1098-5514 ; 0022-538X
    ISSN (online) 1098-5514
    ISSN 0022-538X
    DOI 10.1128/jvi.00849-23
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  3. Article ; Online: Apolipoprotein Mimetic Peptides: Potential New Therapies for Cardiovascular Diseases.

    Wolska, Anna / Reimund, Mart / Sviridov, Denis O / Amar, Marcelo J / Remaley, Alan T

    Cells

    2021  Volume 10, Issue 3

    Abstract: Since the seminal breakthrough of treating diabetic patients with insulin in the 1920s, there has been great interest in developing other proteins and their peptide mimetics as therapies for a wide variety of other medical disorders. Currently, there are ...

    Abstract Since the seminal breakthrough of treating diabetic patients with insulin in the 1920s, there has been great interest in developing other proteins and their peptide mimetics as therapies for a wide variety of other medical disorders. Currently, there are at least 60 different peptides that have been approved for human use and over 150 peptides that are in various stages of clinical development. Peptides mimetic of the major proteins on lipoproteins, namely apolipoproteins, have also been developed first as tools for understanding apolipoprotein structure and more recently as potential therapeutics. In this review, we discuss the biochemistry, peptide mimetics design and clinical trials for peptides based on apoA-I, apoE and apoC-II. We primarily focus on applications of peptide mimetics related to cardiovascular diseases. We conclude with a discussion on the limitations of peptides as therapeutic agents and the challenges that need to be overcome before apolipoprotein mimetic peptides can be developed into new drugs.
    MeSH term(s) Apolipoprotein A-I/therapeutic use ; Apolipoproteins/metabolism ; Cardiovascular Diseases/therapy ; Humans ; Peptides/metabolism
    Chemical Substances APOA1 protein, human ; Apolipoprotein A-I ; Apolipoproteins ; Peptides
    Language English
    Publishing date 2021-03-08
    Publishing country Switzerland
    Document type Journal Article ; Research Support, N.I.H., Intramural ; Review
    ZDB-ID 2661518-6
    ISSN 2073-4409 ; 2073-4409
    ISSN (online) 2073-4409
    ISSN 2073-4409
    DOI 10.3390/cells10030597
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: An In Vivo Rat Study of Bioresorbable Mg-2Zn-2Ga Alloy Implants.

    Drobyshev, Alexey / Gurganchova, Zaira / Redko, Nikolay / Komissarov, Alexander / Bazhenov, Viacheslav / Statnik, Eugene S / Sadykova, Iuliia A / Sviridov, Eugeny / Salimon, Alexey I / Korsunsky, Alexander M / Zayratyants, Oleg / Ushmarov, Denis / Yanushevich, Oleg

    Bioengineering (Basel, Switzerland)

    2023  Volume 10, Issue 2

    Abstract: In the present study, pins made from the novel Mg-2Zn-2Ga alloy were installed within the femoral bones of six Wistar rats. The level of bioresorption was assessed after 1, 3, and 6 months by radiography, histology, SEM, and EDX. Significant ... ...

    Abstract In the present study, pins made from the novel Mg-2Zn-2Ga alloy were installed within the femoral bones of six Wistar rats. The level of bioresorption was assessed after 1, 3, and 6 months by radiography, histology, SEM, and EDX. Significant bioresorption was evident after 3 months, and complete dissolution of the pins occurred at 6 months after the installation. No pronounced gas cavities could be found at the pin installation sites throughout the postoperative period. The animals' blood parameters showed no signs of inflammation or toxication. These findings are sufficiently encouraging to motivate further research to broaden the experimental coverage to increase the number of observed animals and to conduct tests involving other, larger animals.
    Language English
    Publishing date 2023-02-20
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2746191-9
    ISSN 2306-5354
    ISSN 2306-5354
    DOI 10.3390/bioengineering10020273
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Apolipoprotein Mimetic Peptides

    Anna Wolska / Mart Reimund / Denis O. Sviridov / Marcelo J. Amar / Alan T. Remaley

    Cells, Vol 10, Iss 597, p

    Potential New Therapies for Cardiovascular Diseases

    2021  Volume 597

    Abstract: Since the seminal breakthrough of treating diabetic patients with insulin in the 1920s, there has been great interest in developing other proteins and their peptide mimetics as therapies for a wide variety of other medical disorders. Currently, there are ...

    Abstract Since the seminal breakthrough of treating diabetic patients with insulin in the 1920s, there has been great interest in developing other proteins and their peptide mimetics as therapies for a wide variety of other medical disorders. Currently, there are at least 60 different peptides that have been approved for human use and over 150 peptides that are in various stages of clinical development. Peptides mimetic of the major proteins on lipoproteins, namely apolipoproteins, have also been developed first as tools for understanding apolipoprotein structure and more recently as potential therapeutics. In this review, we discuss the biochemistry, peptide mimetics design and clinical trials for peptides based on apoA-I, apoE and apoC-II. We primarily focus on applications of peptide mimetics related to cardiovascular diseases. We conclude with a discussion on the limitations of peptides as therapeutic agents and the challenges that need to be overcome before apolipoprotein mimetic peptides can be developed into new drugs.
    Keywords apolipoprotein ; atherosclerosis ; cardiovascular diseases ; cholesterol ; clinical trials ; HDL ; Biology (General) ; QH301-705.5
    Subject code 616
    Language English
    Publishing date 2021-03-01T00:00:00Z
    Publisher MDPI AG
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  6. Article ; Online: Systematic evaluation of the effect of different apolipoprotein A-I mimetic peptides on the performance of synthetic high-density lipoproteins in vitro and in vivo.

    Yuan, Wenmin / Ernst, Kelsey / Kuai, Rui / Morin, Emily E / Yu, Minzhi / Sviridov, Denis O / Tang, Jie / Mei, Ling / Li, Dan / Ackermann, Rose / Remaley, Alan T / Schwendeman, Anna

    Nanomedicine : nanotechnology, biology, and medicine

    2022  Volume 48, Page(s) 102646

    Abstract: Synthetic high-density lipoproteins nanomedicine (sHDL) composed of apolipoprotein A-I (ApoA-I) mimetic peptides and lipids have shown very promising results for the treatment of various cardiovascular diseases. Numerous efforts have also been made to ... ...

    Abstract Synthetic high-density lipoproteins nanomedicine (sHDL) composed of apolipoprotein A-I (ApoA-I) mimetic peptides and lipids have shown very promising results for the treatment of various cardiovascular diseases. Numerous efforts have also been made to design different ApoA-I mimetic peptides to improve the potency of sHDL, especially the efficiency of reverse cholesterol transport. However, the way in which ApoA-I mimetic peptides affect the properties of sHDL, including stability, cholesterol efflux, cholesterol esterification, elimination in vivo, and the relationship of these properties, is still poorly understood. Revealing the effect of these factors on the potency of sHDL is important for the design of better ApoA-I mimetic peptides. In this study, three widely used ApoA-I mimetic peptides with different sequences, lengths, LCAT activation and lipid binding affinities were used for the preparation of sHDL and were evaluated in terms of physical/chemical properties, cholesterol efflux, cholesterol esterification, remodeling, and pharmacokinetics/pharmacodynamics. Our results showed that ApoA-I mimetic peptides with the highest cholesterol efflux and cholesterol esterification in vitro did not exhibit the highest cholesterol mobilization in vivo. Further analysis indicated that other factors, such as pharmacokinetics and remodeling of sHDL, need to be considered in order to predict the efficiency of cholesterol mobilization in vivo. Thus, our study highlights the importance of using the overall performance, rather than in vitro results alone, as the blueprint for the design and optimization of ApoA-I mimetic peptides.
    MeSH term(s) Lipoproteins, HDL/chemistry ; Apolipoprotein A-I/pharmacology ; Apolipoprotein A-I/chemistry ; Peptides/pharmacology ; Peptides/chemistry ; Cholesterol/chemistry ; Biological Transport
    Chemical Substances Lipoproteins, HDL ; Apolipoprotein A-I ; Peptides ; Cholesterol (97C5T2UQ7J)
    Language English
    Publishing date 2022-12-19
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2183417-9
    ISSN 1549-9642 ; 1549-9634
    ISSN (online) 1549-9642
    ISSN 1549-9634
    DOI 10.1016/j.nano.2022.102646
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: A New Structural Model of Apolipoprotein B100 Based on Computational Modeling and Cross Linking.

    Jeiran, Kianoush / Gordon, Scott M / Sviridov, Denis O / Aponte, Angel M / Haymond, Amanda / Piszczek, Grzegorz / Lucero, Diego / Neufeld, Edward B / Vaisman, Iosif I / Liotta, Lance / Baranova, Ancha / Remaley, Alan T

    International journal of molecular sciences

    2022  Volume 23, Issue 19

    Abstract: ApoB-100 is a member of a large lipid transfer protein superfamily and is one of the main apolipoproteins found on low-density lipoprotein (LDL) and very low-density lipoprotein (VLDL) particles. Despite its clinical significance for the development of ... ...

    Abstract ApoB-100 is a member of a large lipid transfer protein superfamily and is one of the main apolipoproteins found on low-density lipoprotein (LDL) and very low-density lipoprotein (VLDL) particles. Despite its clinical significance for the development of cardiovascular disease, there is limited information on apoB-100 structure. We have developed a novel method based on the "divide and conquer" algorithm, using PSIPRED software, by dividing apoB-100 into five subunits and 11 domains. Models of each domain were prepared using I-TASSER, DEMO, RoseTTAFold, Phyre2, and MODELLER. Subsequently, we used disuccinimidyl sulfoxide (DSSO), a new mass spectrometry cleavable cross-linker, and the known position of disulfide bonds to experimentally validate each model. We obtained 65 unique DSSO cross-links, of which 87.5% were within a 26 Å threshold in the final model. We also evaluated the positions of cysteine residues involved in the eight known disulfide bonds in apoB-100, and each pair was measured within the expected 5.6 Å constraint. Finally, multiple domains were combined by applying constraints based on detected long-range DSSO cross-links to generate five subunits, which were subsequently merged to achieve an uninterrupted architecture for apoB-100 around a lipoprotein particle. Moreover, the dynamics of apoB-100 during particle size transitions was examined by comparing VLDL and LDL computational models and using experimental cross-linking data. In addition, the proposed model of receptor ligand binding of apoB-100 provides new insights into some of its functions.
    MeSH term(s) Apolipoprotein B-100 ; Apolipoproteins B/metabolism ; Computer Simulation ; Cysteine ; Disulfides ; Ligands ; Lipoproteins, LDL/chemistry ; Lipoproteins, VLDL ; Models, Structural ; Sulfoxides
    Chemical Substances Apolipoprotein B-100 ; Apolipoproteins B ; Disulfides ; Ligands ; Lipoproteins, LDL ; Lipoproteins, VLDL ; Sulfoxides ; Cysteine (K848JZ4886)
    Language English
    Publishing date 2022-09-29
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2019364-6
    ISSN 1422-0067 ; 1422-0067 ; 1661-6596
    ISSN (online) 1422-0067
    ISSN 1422-0067 ; 1661-6596
    DOI 10.3390/ijms231911480
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  8. Article ; Online: Incorporation of α-methylated amino acids into Apolipoprotein A-I mimetic peptides improves their helicity and cholesterol efflux potential.

    Islam, Rafique / Sviridov, Denis O / Drake, Steven K / Tunyi, Jude / Abdoulaeva, Galina / Freeman, Lita A / Pastor, Richard W / Remaley, Alan T

    Biochemical and biophysical research communications

    2020  Volume 526, Issue 2, Page(s) 349–354

    Abstract: Apolipoprotein A-I (ApoA-I) mimetic peptides are potential therapeutic agents for promoting the efflux of excess cellular cholesterol, which is dependent upon the presence of an amphipathic helix. Since α-methylated Ala enhances peptide helicity, we ... ...

    Abstract Apolipoprotein A-I (ApoA-I) mimetic peptides are potential therapeutic agents for promoting the efflux of excess cellular cholesterol, which is dependent upon the presence of an amphipathic helix. Since α-methylated Ala enhances peptide helicity, we hypothesized that incorporating other types of α-methylated amino acids into ApoA-I mimetic peptides may also increase their helicity and cholesterol efflux potential. The last helix of apoA-I, peptide 'A' (VLESFKVSFLSALEEYTKKLNT), was used to design peptides containing a single type of α-methylated amino acid substitution (Ala/A
    MeSH term(s) Amino Acid Sequence ; Amino Acids/chemistry ; Animals ; Apolipoprotein A-I/chemistry ; Cell Line ; Cholesterol/metabolism ; Drug Design ; Humans ; Methylation ; Peptidomimetics/chemistry ; Peptidomimetics/pharmacology
    Chemical Substances Amino Acids ; Apolipoprotein A-I ; Peptidomimetics ; Cholesterol (97C5T2UQ7J)
    Language English
    Publishing date 2020-03-26
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Intramural
    ZDB-ID 205723-2
    ISSN 1090-2104 ; 0006-291X ; 0006-291X
    ISSN (online) 1090-2104 ; 0006-291X
    ISSN 0006-291X
    DOI 10.1016/j.bbrc.2020.03.070
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Asthmatic patients with high serum amyloid A have proinflammatory HDL: Implications for augmented systemic and airway inflammation.

    Yao, Xianglan / Kaler, Maryann / Qu, Xuan / Kalidhindi, Rama Satyanarayana Raju / Sviridov, Denis / Dasseux, Amaury / Barr, Eric / Keeran, Karen / Jeffries, Kenneth R / Yu, Zu-Xi / Gao, Meixia / Gordon, Scott / Barochia, Amisha V / Mills, Joni / Shahid, Shahid / Weir, Nargues A / Kalchiem-Dekel, Or / Theard, Patricia / Playford, Martin P /
    Stylianou, Mario / Fitzgerald, Wendy / Remaley, Alan T / Levine, Stewart J

    The Journal of allergy and clinical immunology

    2023  Volume 153, Issue 4, Page(s) 1010–1024.e14

    Abstract: Rationale: Serum amyloid A (SAA) is bound to high-density lipoproteins (HDL) in blood. Although SAA is increased in the blood of patients with asthma, it is not known whether this modifies asthma severity.: Objective: We sought to define the clinical ...

    Abstract Rationale: Serum amyloid A (SAA) is bound to high-density lipoproteins (HDL) in blood. Although SAA is increased in the blood of patients with asthma, it is not known whether this modifies asthma severity.
    Objective: We sought to define the clinical characteristics of patients with asthma who have high SAA levels and assess whether HDL from SAA-high patients with asthma is proinflammatory.
    Methods: SAA levels in serum from subjects with and without asthma were quantified by ELISA. HDLs isolated from subjects with asthma and high SAA levels were used to stimulate human monocytes and were intravenously administered to BALB/c mice.
    Results: An SAA level greater than or equal to 108.8 μg/mL was defined as the threshold to identify 11% of an asthmatic cohort (n = 146) as being SAA-high. SAA-high patients with asthma were characterized by increased serum C-reactive protein, IL-6, and TNF-α; older age; and an increased prevalence of obesity and severe asthma. HDL isolated from SAA-high patients with asthma (SAA-high HDL) had an increased content of SAA as compared with HDL from SAA-low patients with asthma and induced the secretion of IL-6, IL-1β, and TNF-α from human monocytes via a formyl peptide receptor 2/ATP/P2X purinoceptor 7 axis. Intravenous administration to mice of SAA-high HDL, but not normal HDL, induced systemic inflammation and amplified allergen-induced neutrophilic airway inflammation and goblet cell metaplasia.
    Conclusions: SAA-high patients with asthma are characterized by systemic inflammation, older age, and an increased prevalence of obesity and severe asthma. HDL from SAA-high patients with asthma is proinflammatory and, when intravenously administered to mice, induces systemic inflammation, and amplifies allergen-induced neutrophilic airway inflammation. This suggests that systemic inflammation induced by SAA-high HDL may augment disease severity in asthma.
    MeSH term(s) Humans ; Animals ; Mice ; Lipoproteins, HDL/metabolism ; Lipoproteins, HDL/pharmacology ; Serum Amyloid A Protein/analysis ; Serum Amyloid A Protein/metabolism ; Serum Amyloid A Protein/pharmacology ; Tumor Necrosis Factor-alpha/metabolism ; Interleukin-6 ; Asthma ; Inflammation/metabolism ; Obesity ; Allergens
    Chemical Substances Lipoproteins, HDL ; Serum Amyloid A Protein ; Tumor Necrosis Factor-alpha ; Interleukin-6 ; Allergens
    Language English
    Publishing date 2023-12-12
    Publishing country United States
    Document type Journal Article
    ZDB-ID 121011-7
    ISSN 1097-6825 ; 1085-8725 ; 0091-6749
    ISSN (online) 1097-6825 ; 1085-8725
    ISSN 0091-6749
    DOI 10.1016/j.jaci.2023.11.917
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  10. Article ; Online: The dynamic range problem in the analysis of the plasma proteome.

    Hortin, Glen L / Sviridov, Denis

    Journal of proteomics

    2010  Volume 73, Issue 3, Page(s) 629–636

    Abstract: One of the greatest challenges in analyzing the plasma proteome is the wide range of concentration of different proteins. The current study examines the range of protein concentration for 18 proteins measured over a year in a clinical laboratory to ... ...

    Abstract One of the greatest challenges in analyzing the plasma proteome is the wide range of concentration of different proteins. The current study examines the range of protein concentration for 18 proteins measured over a year in a clinical laboratory to provide data on pathological extremes in protein concentrations. The complete measured range, from upper limits for albumin to lowest values for thyroid-stimulating hormone (TSH), represented more than 10 logs of molar abundance. A number of plasma proteins measured in the clinical laboratory varied over a concentration range spanning more than 4 logs, and limits of detection of clinical assays were inadequate to assess full concentration ranges of several proteins. Considering reported values from studies using higher sensitivity assays suggest that plasma concentrations of prostate-specific antigen (PSA), human chorionic gonadotropin (hCG), and cardiac troponin I vary by more than 7 logs. All of the plasma proteins measured in the present study represent secretory proteins or highly expressed components of specific tissues. Thus, the dynamic range for these components is likely to greatly underestimate the total range of protein concentration in the plasma proteome.
    MeSH term(s) Blood Proteins/analysis ; Blood Proteins/metabolism ; Female ; Humans ; Limit of Detection ; Male ; Molecular Weight ; Osmolar Concentration ; Proteome/analysis ; Proteome/metabolism ; Proteomics/methods ; Proteomics/standards ; Reference Values ; Thyrotropin/analysis ; Thyrotropin/blood ; Transferrin/analysis ; beta 2-Microglobulin/analysis ; beta 2-Microglobulin/blood
    Chemical Substances Blood Proteins ; Proteome ; Transferrin ; beta 2-Microglobulin ; Thyrotropin (9002-71-5)
    Language English
    Publishing date 2010-01-03
    Publishing country Netherlands
    Document type Journal Article ; Research Support, N.I.H., Intramural
    ZDB-ID 2400835-7
    ISSN 1876-7737 ; 1874-3919
    ISSN (online) 1876-7737
    ISSN 1874-3919
    DOI 10.1016/j.jprot.2009.07.001
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