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Book ; Online: Protocol for validation of point prevalence surveys of healthcare-associated infections and antimicrobial use in European long-term care facilities

Richizzi, Enrico / Kinross, Pete

2016-2017

(ECDC technical document)

2016

Institution	Europäisches Zentrum für die Prävention und die Kontrolle von Krankheiten
Author's details	this protocol was commissioned by the European Centre for Disease Prevention and Control (ECDC), coordinated by Pete Kinross and Carl Suetens ; authors Enrico Ricchizzi, Maria Luisa Moro (Agenzia sanitaria e sociale regionale; Italy); Katrien Latour, Béatrice Jans (WIVISP, Belgium); Tommi Kärki, Carl Suetens, Pete Kinross (ECDC)
Series title	ECDC technical document
Language	English
Size	1 Online-Ressource (iv, 37 Seiten)
Edition	Version 1.1
Publisher	ECDC
Publishing place	Stockholm
Publishing country	Sweden
Document type	Book ; Online
HBZ-ID	HT019061933
ISBN	978-92-9193-855-1 ; 92-9193-855-6
DOI	10.2900/963258
Database	ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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Book ; Online: Protocol for point prevalence surveys of healthcare-associated infections and antimicrobial use in European long-term care facilities

Latour, Katrien / Kinross, Pete

(ECDC technical document)

2016

Institution	Europäisches Zentrum für die Prävention und die Kontrolle von Krankheiten
Author's details	this protocol was commissioned by the European Centre for Disease Prevention and Control (ECDC), coordinated by Pete Kinross and Carl Suetens ; contributing authors: Katrien Latour, Béatrice Jans (WIV-ISP, Belgium); Enrico Ricchizzi, Maria Luisa Moro (Agenzia sanitaria e sociale regionale; Italy); Tommi Kärki, Pete Kinross, Carl Suetens (ECDC)
Series title	ECDC technical document
Language	English
Size	1 Online-Ressource (iv, 55 Seiten)
Edition	Version 2.1
Publisher	ECDC
Publishing place	Stockholm
Publishing country	Sweden
Document type	Book ; Online
HBZ-ID	HT019061898
ISBN	978-92-9193-849-0 ; 92-9193-849-1
DOI	10.2900/02719
Database	ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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Book ; Online: European surveillance of Clostridium difficile infections

Kola, Axel / Kinross, Pete

(ECDC technical document)

2015

Institution	Europäisches Zentrum für die Prävention und die Kontrolle von Krankheiten
Author's details	this technical document was commissioned by the European Centre for Disease Prevention and Control (ECDC), coordinated by Pete Kinross and Carl Suetens, and produced by the ECDIS-Net project coordinated by the Leiden University Medical Center LUMC, The Netherlands ; contributing authors: Axel Kola, Michael Behnke, Petra Gastmeier (Charité - Universitätsmedizin Berlin, Germany); Sofie M van Dorp, Ed J Kuijper (Leiden University Medical Center, The Netherlands); Pete Kinross, Carl Suetens (ECDC); ECDIS-Net surveillance working group
Series title	ECDC technical document
Language	English
Size	1 Online-Ressource (iv, 16 Seiten)
Edition	Surveillance protocol version 2.1
Publisher	ECDC
Publishing place	Stockholm
Publishing country	Sweden
Document type	Book ; Online
HBZ-ID	HT019062815
ISBN	978-92-9193-635-9 ; 92-9193-635-9
DOI	10.2900/071325
Database	ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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Book ; Online: European surveillance of Clostridium difficile infections

Kola, Axel / Kinross, Pete / Suetens, Carl

(ECDC technical document)

2015

Institution	Europäisches Zentrum für die Prävention und die Kontrolle von Krankheiten
Author's details	ECDC, European Centre for Disease Prevention and Control ; contributing authors for a previous version of this protocol (version 2.1): Axel Kola, Michael Behnke, Petra Gastmeier (Charité - Universitätsmedizin Berlin, Germany); Sofie M van Dorp, Ed J Kuijper (Leiden University Medical Center, The Netherlands); and other members of the ECDIS-Net project surveillance working group
Series title	ECDC technical document
Language	English
Size	1 Online-Ressource (iv, 18 Seiten)
Edition	Surveillance protocol version 2.2
Publisher	ECDC
Publishing place	Stockholm
Publishing country	Sweden
Document type	Book ; Online
HBZ-ID	HT019062831
ISBN	978-92-9193-730-1 ; 92-9193-730-4
DOI	10.2900/44795
Database	ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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Article ; Online: Large increase in bloodstream infections with carbapenem-resistant

Kinross, Pete / Gagliotti, Carlo / Merk, Hanna / Plachouras, Diamantis / Monnet, Dominique L / Högberg, Liselotte Diaz

Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

2022 Volume 27, Issue 46

Abstract: Recent data from the European Antimicrobial Resistance Surveillance Network (EARS-Net) show a large increase of +57% ... ...

Abstract	Recent data from the European Antimicrobial Resistance Surveillance Network (EARS-Net) show a large increase of +57% in
MeSH term(s)	Humans ; Drug Resistance, Bacterial ; COVID-19 ; Pandemics ; Anti-Bacterial Agents/pharmacology ; Anti-Bacterial Agents/therapeutic use ; Acinetobacter ; Carbapenems/pharmacology ; Carbapenems/therapeutic use ; Sepsis/drug therapy
Chemical Substances	Anti-Bacterial Agents ; Carbapenems
Language	English
Publishing date	2022-11-18
Publishing country	Sweden
Document type	Journal Article
ZDB-ID	1338803-4
ISSN	1560-7917 ; 1025-496X
ISSN (online)	1560-7917
ISSN	1025-496X
DOI	10.2807/1560-7917.ES.2022.27.46.2200845
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article ; Online: Clostridioides difficile infections were predominantly driven by fluoroquinolone-resistant Clostridioides difficile ribotypes 176 and 001 in Slovakia in 2018-2019.

Plankaova, Adriana / Brajerova, Marie / Capek, Vaclav / Balikova Novotna, Gabriela / Kinross, Pete / Skalova, Jana / Soltesova, Anna / Drevinek, Pavel / Krutova, Marcela

International journal of antimicrobial agents

2023 Volume 62, Issue 1, Page(s) 106824

Abstract: Aim: To investigate the epidemiology of Clostridioides difficile infection (CDI) in Slovakian hospitals after the emergence of ribotype 176 (027-like) in 2016.: Methods: Between 2018 and 2019, European Centre for Disease Control and Prevention CDI ... ...

Abstract	Aim: To investigate the epidemiology of Clostridioides difficile infection (CDI) in Slovakian hospitals after the emergence of ribotype 176 (027-like) in 2016. Methods: Between 2018 and 2019, European Centre for Disease Control and Prevention CDI surveillance protocol v2.3 was applied to 14 hospitals, with additional data collected on recent antimicrobial use and the characterization of C. difficile isolates. Results: The mean hospital incidence of CDI was 4.1 cases per 10,000 patient bed-days. One hundred and five (27.6%) in-hospital deaths were reported among the 381 cases. Antimicrobial treatment within the previous 4 weeks was recorded in 90.5% (333/368) of cases. Ribotype (RT)176 was detected in 50% (n=185/370, 14 hospitals) and RT001 was detected in 34.6% (n=128/370,13/14 hospitals) of cases with RT data. Overall, 86% (n=318/370) of isolates were resistant to moxifloxacin by Thr82Ile in GyrA (99.7%). Multi-locus variable tandem repeat analysis showed clonal relatedness of predominant RTs within and between hospitals. Seven of 14 sequenced RT176 isolates and five of 13 RT001 isolates showed between zero and three allelic differences by whole-genome multi-locus sequence typing. The majority of sequenced isolates (24/27) carried the erm(B) gene and 16/27 also carried the aac(6')-aph(2'') gene with the corresponding antimicrobial susceptibility phenotypes. Nine RT176 strains carried the cfr(E)gene and one RT001 strain carried the cfr(C) gene, but without linezolid resistance. Conclusions: The newly-predominant RT176 and endemic RT001 are driving the epidemiology of CDI in Slovakia. In addition to fluoroquinolones, the use of macrolide-lincosamide-streptogramin B antibiotics can represent another driving force for the spread of these epidemic lineages. In C. difficile, linezolid resistance should be confirmed phenotypically in strains with detected cfr gene(s).
MeSH term(s)	Humans ; Fluoroquinolones/pharmacology ; Clostridioides difficile/genetics ; Ribotyping ; Slovakia/epidemiology ; Clostridioides/genetics ; Linezolid ; Multilocus Sequence Typing ; Anti-Bacterial Agents/pharmacology ; Anti-Bacterial Agents/therapeutic use ; Clostridium Infections/epidemiology ; Clostridium Infections/drug therapy ; Macrolides ; Microbial Sensitivity Tests
Chemical Substances	Fluoroquinolones ; Linezolid (ISQ9I6J12J) ; Anti-Bacterial Agents ; Macrolides
Language	English
Publishing date	2023-04-26
Publishing country	Netherlands
Document type	Journal Article
ZDB-ID	1093977-5
ISSN	1872-7913 ; 0924-8579
ISSN (online)	1872-7913
ISSN	0924-8579
DOI	10.1016/j.ijantimicag.2023.106824
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Article ; Online: Clostridioides difficile infections were predominantly driven by fluoroquinolone-resistant Clostridioides difficile ribotypes 176 and 001 in Slovakia in 2018–2019

Plankaova, Adriana / Brajerova, Marie / Čapek, Václav / Balikova Novotna, Gabriela / Kinross, Pete / Skálová, Jana / Soltesova, Anna / Drevinek, Pavel / Krutova, Marcela

International Journal of Antimicrobial Agents. 2023 July, v. 62, no. 1 p.106824-

2023

Abstract: To investigate the epidemiology of Clostridioides difficile infection (CDI) in Slovakian hospitals after the emergence of ribotype 176 (027-like) in 2016. Between 2018 and 2019, European Centre for Disease Control and Prevention CDI surveillance protocol ...

Abstract	To investigate the epidemiology of Clostridioides difficile infection (CDI) in Slovakian hospitals after the emergence of ribotype 176 (027-like) in 2016. Between 2018 and 2019, European Centre for Disease Control and Prevention CDI surveillance protocol v2.3 was applied to 14 hospitals, with additional data collected on recent antimicrobial use and the characterization of C. difficile isolates. The mean hospital incidence of CDI was 4.1 cases per 10,000 patient bed-days. One hundred and five (27.6%) in-hospital deaths were reported among the 381 cases. Antimicrobial treatment within the previous 4 weeks was recorded in 90.5% (333/368) of cases. Ribotype (RT)176 was detected in 50% (n=185/370, 14 hospitals) and RT001 was detected in 34.6% (n=128/370,13/14 hospitals) of cases with RT data. Overall, 86% (n=318/370) of isolates were resistant to moxifloxacin by Thr82Ile in GyrA (99.7%). Multi-locus variable tandem repeat analysis showed clonal relatedness of predominant RTs within and between hospitals. Seven of 14 sequenced RT176 isolates and five of 13 RT001 isolates showed between zero and three allelic differences by whole-genome multi-locus sequence typing. The majority of sequenced isolates (24/27) carried the erm(B) gene and 16/27 also carried the aac(6′)-aph(2′') gene with the corresponding antimicrobial susceptibility phenotypes. Nine RT176 strains carried the cfr(E)gene and one RT001 strain carried the cfr(C) gene, but without linezolid resistance. The newly-predominant RT176 and endemic RT001 are driving the epidemiology of CDI in Slovakia. In addition to fluoroquinolones, the use of macrolide–lincosamide–streptogramin B antibiotics can represent another driving force for the spread of these epidemic lineages. In C. difficile, linezolid resistance should be confirmed phenotypically in strains with detected cfr gene(s).
Keywords	Clostridium difficile ; antibiotic resistance ; disease control ; epidemiology ; genes ; hospitals ; linezolid ; monitoring ; moxifloxacin ; multilocus sequence typing ; patients ; ribotypes ; Slovakia ; Surveillance ; Ribotyping ; Mortality ; Fluoroquinolones ; 4C antibiotics ; erm(B) ; cfr(E) ; aac(6′)-aph(2′')
Language	English
Dates of publication	2023-07
Publishing place	Elsevier Ltd
Document type	Article ; Online
Note	Use and reproduction
ZDB-ID	1093977-5
ISSN	1872-7913 ; 0924-8579
ISSN (online)	1872-7913
ISSN	0924-8579
DOI	10.1016/j.ijantimicag.2023.106824
Database	NAL-Catalogue (AGRICOLA)

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Article ; Online: Rapidly increasing cumulative incidence of coronavirus disease (COVID-19) in the European Union/European Economic Area and the United Kingdom, 1 January to 15 March 2020.

Kinross, Pete / Suetens, Carl / Dias, Joana Gomes / Alexakis, Leonidas / Wijermans, Ariana / Colzani, Edoardo / Monnet, Dominique L

Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

2020 Volume 25, Issue 11

Abstract: The cumulative incidence of coronavirus disease (COVID-19) cases is showing similar trends in European Union/European Economic Area countries and the United Kingdom confirming that, while at a different stage depending on the country, the COVID-19 ... ...

Abstract	The cumulative incidence of coronavirus disease (COVID-19) cases is showing similar trends in European Union/European Economic Area countries and the United Kingdom confirming that, while at a different stage depending on the country, the COVID-19 pandemic is progressing rapidly in all countries. Based on the experience from Italy, countries, hospitals and intensive care units should increase their preparedness for a surge of patients with COVID-19 who will require healthcare, and in particular intensive care.
MeSH term(s)	Betacoronavirus ; COVID-19 ; Civil Defense ; Coronavirus/isolation & purification ; Coronavirus Infections/diagnosis ; Coronavirus Infections/epidemiology ; Coronavirus Infections/transmission ; Coronavirus Infections/virology ; Disease Notification/statistics & numerical data ; Disease Outbreaks ; Europe/epidemiology ; European Union ; Humans ; Incidence ; Intensive Care Units/organization & administration ; Pandemics ; Pneumonia, Viral/diagnosis ; Pneumonia, Viral/epidemiology ; Pneumonia, Viral/transmission ; Pneumonia, Viral/virology ; Population Surveillance ; SARS-CoV-2 ; Severe Acute Respiratory Syndrome/virology ; Triage ; United Kingdom/epidemiology
Keywords	covid19
Language	English
Publishing date	2020-03-16
Publishing country	Sweden
Document type	Journal Article
ZDB-ID	1338803-4
ISSN	1560-7917 ; 1025-496X
ISSN (online)	1560-7917
ISSN	1025-496X
DOI	10.2807/1560-7917.ES.2020.25.11.2000285
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Article: Rapidly increasing cumulative incidence of coronavirus disease (COVID-19) in the European Union/European Economic Area and the United Kingdom, 1 January to 15 March 2020

Kinross, Pete / Suetens, Carl / Gomes Dias, Joana / Alexakis, Leonidas / Wijermans, Ariana / Colzani, Edoardo / Monnet, Dominique L

Euro surveill

Abstract	The cumulative incidence of coronavirus disease (COVID-19) cases is showing similar trends in European Union/European Economic Area countries and the United Kingdom confirming that, while at a different stage depending on the country, the COVID-19 pandemic is progressing rapidly in all countries. Based on the experience from Italy, countries, hospitals and intensive care units should increase their preparedness for a surge of patients with COVID-19 who will require healthcare, and in particular intensive care.
Keywords	covid19
Publisher	WHO
Document type	Article
Note	WHO #Covidence: #8748
Database	COVID19

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Article ; Online: COVID-19 research priorities for non-pharmaceutical public health and social measures.

Epidemiology and infection

2021 Volume 149, Page(s) e87

Abstract: Europe is in the midst of a COVID-19 epidemic and a number of non-pharmaceutical public health and social measures have been implemented, in order to contain the transmission of severe acute respiratory syndrome coronavirus 2. These measures are ... ...

Abstract	Europe is in the midst of a COVID-19 epidemic and a number of non-pharmaceutical public health and social measures have been implemented, in order to contain the transmission of severe acute respiratory syndrome coronavirus 2. These measures are fundamental elements of the public health approach to controlling transmission but have proven not to be sufficiently effective. Therefore, the European Centre for Disease Prevention and Control has conducted an assessment of research gaps that can help inform policy decisions regarding the COVID-19 response. We have identified research gaps in the area of non-pharmaceutical measures, physical distancing, contact tracing, transmission, communication, mental health, seasonality and environment/climate, surveillance and behavioural aspects of COVID-19. This prioritisation exercise is a step towards the global efforts of developing a coherent research road map in coping with the current epidemic but also developing preparedness measures for the next unexpected epidemic.
MeSH term(s)	COVID-19/epidemiology ; COVID-19/prevention & control ; COVID-19/transmission ; COVID-19 Testing ; Communication ; Contact Tracing ; Epidemiological Monitoring ; Humans ; Mental Health ; Physical Distancing ; Research ; SARS-CoV-2
Language	English
Publishing date	2021-04-05
Publishing country	England
Document type	Journal Article
ZDB-ID	632982-2
ISSN	1469-4409 ; 0950-2688
ISSN (online)	1469-4409
ISSN	0950-2688
DOI	10.1017/S0950268821000716
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