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  1. Article: Preclinical evaluation of engineered L-asparaginase variants to improve the treatment of Acute Lymphoblastic Leukemia.

    Sengupta, Soumika / Biswas, Mainak / Gandhi, Khushboo A / Gupta, Saurabh Kumar / Gera, Poonam B / Gota, Vikram / Sonawane, Avinash

    Translational oncology

    2024  Volume 43, Page(s) 101909

    Abstract: Introduction: Escherichia coli l-asparaginase (EcA), an integral part of multi-agent chemotherapy protocols of acute lymphoblastic leukemia (ALL), is constrained by safety concerns and the development of anti-asparaginase antibodies. Novel variants with ...

    Abstract Introduction: Escherichia coli l-asparaginase (EcA), an integral part of multi-agent chemotherapy protocols of acute lymphoblastic leukemia (ALL), is constrained by safety concerns and the development of anti-asparaginase antibodies. Novel variants with better pharmacological properties are desirable.
    Methods: Thousands of novel EcA variants were constructed using protein engineering approach. After preliminary screening, two mutants, KHY-17 and KHYW-17 were selected for further development. The variants were characterized for asparaginase activity, glutaminase activity, cytotoxicity and antigenicity in vitro. Immunogenicity, pharmacokinetics, safety and efficacy were tested in vivo. Binding of the variants to pre-existing antibodies in primary and relapsed ALL patients' samples was evaluated.
    Results: Both variants showed similar asparaginase activity but approximately 24-fold reduced glutaminase activity compared to wild-type EcA (WT). Cytotoxicity against Reh cells was significantly higher with the mutants, although not toxic to human PBMCs than WT. The mutants showed approximately 3-fold lower IgG and IgM production compared to WT. Pharmacokinetic study in BALB/c mice showed longer half-life of the mutants (KHY-17- 267.28±9.74; KHYW-17- 167.41±14.4) compared to WT (103.24±18). Single and repeat-doses showed no toxicity up to 2000 IU/kg and 1600 IU/kg respectively. Efficacy in ALL xenograft mouse model showed 80-90 % reduction of leukemic cells with mutants compared to 40 % with WT. Consequently, survival was 90 % in each mutant group compared to 10 % with WT. KHYW-17 showed over 2-fold lower binding to pre-existing anti-asparaginase antibodies from ALL patients treated with l-asparaginase.
    Conclusion: EcA variants demonstrated better pharmacological properties compared to WT that makes them good candidates for further development.
    Language English
    Publishing date 2024-02-26
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2443840-6
    ISSN 1936-5233
    ISSN 1936-5233
    DOI 10.1016/j.tranon.2024.101909
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Authors' reply.

    Singh, Itu / Ahuja, Madhvi / Lavania, Mallika / Pathak, Vinay K / Turankar, Ravindra P / Singh, Vikram / Sengupta, Utpal / Das, Loretta / Kumar, Archana / Saini, Geeta B

    Indian journal of dermatology, venereology and leprology

    2023  Volume 89, Issue 6, Page(s) 872–873

    Language English
    Publishing date 2023-11-07
    Publishing country United States
    Document type Journal Article
    ZDB-ID 416068-x
    ISSN 0973-3922 ; 0019-5162 ; 0378-6323
    ISSN (online) 0973-3922
    ISSN 0019-5162 ; 0378-6323
    DOI 10.25259/IJDVL_1056_2023
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Response to Lim et al. re: "Exosomes Derived from Bone Marrow Mesenchymal Stem Cells as Treatment for Severe COVID-19".

    Sengupta, Vikram / Sengupta, Sascha / Lazo, Angel / Hicok, Kevin C / Moseley, Timothy

    Stem cells and development

    2020  Volume 29, Issue 14, Page(s) 879–881

    MeSH term(s) Betacoronavirus ; COVID-19 ; Coronavirus Infections ; Exosomes ; Humans ; Mesenchymal Stem Cells ; Pandemics ; Pneumonia, Viral ; SARS-CoV-2
    Keywords covid19
    Language English
    Publishing date 2020-06-10
    Publishing country United States
    Document type Journal Article ; Comment
    ZDB-ID 2142214-X
    ISSN 1557-8534 ; 1547-3287
    ISSN (online) 1557-8534
    ISSN 1547-3287
    DOI 10.1089/scd.2020.0095
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Exosomes Derived from Bone Marrow Mesenchymal Stem Cells as Treatment for Severe COVID-19.

    Sengupta, Vikram / Sengupta, Sascha / Lazo, Angel / Woods, Peter / Nolan, Anna / Bremer, Nicholas

    Stem cells and development

    2020  Volume 29, Issue 12, Page(s) 747–754

    Abstract: This prospective nonrandomized open-label cohort study addresses the safety and efficacy of exosomes (ExoFlo™) derived from allogeneic bone marrow mesenchymal stem cells as treatment for severe COVID-19. During April 2020, ExoFlo was provided to 24 SARS- ... ...

    Abstract This prospective nonrandomized open-label cohort study addresses the safety and efficacy of exosomes (ExoFlo™) derived from allogeneic bone marrow mesenchymal stem cells as treatment for severe COVID-19. During April 2020, ExoFlo was provided to 24 SARS-CoV-2 polymerase chain reaction-positive patients at a single hospital center, all of whom met criteria for severe COVID-19 as well as moderate-to-severe acute respiratory distress syndrome. Patients received a single 15 mL intravenous dose of ExoFlo and were evaluated for both safety and efficacy from days 1 to 14 post-treatment. All safety endpoints were met with no adverse events observed within 72 h of ExoFlo administration. A survival rate of 83% was observed. In total, 17 of 24 (71%) patients recovered, 3 of 24 (13%) patients remained critically ill though stable, and 4 of 24 (16%) patients expired for reasons unrelated to the treatment. Overall, after one treatment, patients' clinical status and oxygenation improved with an average pressure of arterial oxygen to fraction of inspired oxygen ratio (PaO
    MeSH term(s) Adult ; Aged ; Aged, 80 and over ; Betacoronavirus/pathogenicity ; Bone Marrow Cells/cytology ; COVID-19 ; Cell-Derived Microparticles/transplantation ; Cohort Studies ; Coronavirus Infections/mortality ; Coronavirus Infections/therapy ; Critical Illness/mortality ; Critical Illness/therapy ; Exosomes/transplantation ; Female ; Humans ; Male ; Mesenchymal Stem Cell Transplantation/adverse effects ; Mesenchymal Stem Cell Transplantation/methods ; Mesenchymal Stem Cells/cytology ; Mesenchymal Stem Cells/ultrastructure ; Middle Aged ; Pandemics ; Pneumonia, Viral/mortality ; Pneumonia, Viral/therapy ; SARS-CoV-2 ; Severity of Illness Index ; Treatment Outcome
    Keywords covid19
    Language English
    Publishing date 2020-05-12
    Publishing country United States
    Document type Clinical Trial ; Journal Article
    ZDB-ID 2142214-X
    ISSN 1557-8534 ; 1547-3287
    ISSN (online) 1557-8534
    ISSN 1547-3287
    DOI 10.1089/scd.2020.0080
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: Response to Kim et al. re: "Exosomes Derived from Bone Marrow Mesenchymal Stem Cells as Treatment for Severe COVID-19"

    Sengupta, Vikram / Sengupta, Sascha / Lazo, Angel / Hicok, Kevin C / Moseley, Timothy

    Stem cells dev

    Keywords covid19
    Publisher WHO
    Document type Article
    Note WHO #Covidence: #592089
    Database COVID19

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  6. Article: Response to Lim et al. re: "Exosomes Derived from Bone Marrow Mesenchymal Stem Cells as Treatment for Severe COVID-19"

    Sengupta, Vikram / Sengupta, Sascha / Lazo, Angel / Hicok, Kevin C / Moseley, Timothy

    Stem Cells Dev

    Keywords covid19
    Publisher WHO
    Document type Article
    Note WHO #Covidence: #592089
    Database COVID19

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  7. Article ; Online: Response to Lim et al. re

    Sengupta, Vikram / Sengupta, Sascha / Lazo, Angel / Hicok, Kevin C. / Moseley, Timothy

    Stem Cells and Development

    “Exosomes Derived from Bone Marrow Mesenchymal Stem Cells as Treatment for Severe COVID-19”

    2020  Volume 29, Issue 14, Page(s) 879–881

    Keywords Developmental Biology ; Cell Biology ; Hematology ; covid19
    Language English
    Publisher Mary Ann Liebert Inc
    Publishing country us
    Document type Article ; Online
    ZDB-ID 2142214-X
    ISSN 1557-8534 ; 1547-3287
    ISSN (online) 1557-8534
    ISSN 1547-3287
    DOI 10.1089/scd.2020.0095
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  8. Article ; Online: Exosomes Derived from Bone Marrow Mesenchymal Stem Cells as Treatment for Severe COVID-19

    Sengupta, Vikram / Sengupta, Sascha / Lazo, Angel / Woods, Peter / Nolan, Anna / Bremer, Nicholas

    Stem Cells and Development

    2020  Volume 29, Issue 12, Page(s) 747–754

    Keywords Developmental Biology ; Cell Biology ; Hematology ; covid19
    Language English
    Publisher Mary Ann Liebert Inc
    Publishing country us
    Document type Article ; Online
    ZDB-ID 2142214-X
    ISSN 1557-8534 ; 1547-3287
    ISSN (online) 1557-8534
    ISSN 1547-3287
    DOI 10.1089/scd.2020.0080
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  9. Article ; Online: Bone Marrow Mesenchymal Stem Cell-Derived Extracellular Vesicle Infusion for the Treatment of Respiratory Failure From COVID-19: A Randomized, Placebo-Controlled Dosing Clinical Trial.

    Lightner, Amy L / Sengupta, Vikram / Qian, Sascha / Ransom, John T / Suzuki, Sam / Park, David J / Melson, Timothy I / Williams, Brian P / Walsh, James J / Awili, Mustafa

    Chest

    2023  Volume 164, Issue 6, Page(s) 1444–1453

    Abstract: Background: Bone marrow mesenchymal stem cell (BM-MSC)-derived extracellular vesicles (ExoFlo) convey the immunomodulatory and regenerative properties of intact BM-MSCs. This study aimed to determine the safety and efficacy of ExoFlo as treatment for ... ...

    Abstract Background: Bone marrow mesenchymal stem cell (BM-MSC)-derived extracellular vesicles (ExoFlo) convey the immunomodulatory and regenerative properties of intact BM-MSCs. This study aimed to determine the safety and efficacy of ExoFlo as treatment for moderate to severe ARDS in patients with severe COVID-19.
    Research question: Do two doses of ExoFlo safely reduce mortality in COVID-19-associated moderate to severe ARDS compared with placebo?
    Study design and methods: A prospective phase 2 multicenter double-anonymized randomized placebo-controlled dosing trial was conducted at five sites across the United States with infusions of placebo, 10 mL of ExoFlo, or 15 mL of ExoFlo on days 1 and 4. Patients (N = 102) with COVID-19-associated moderate to severe ARDS were enrolled and randomized to treatment. Adverse events were documented throughout the study. The primary outcome measure was all-cause 60-day mortality rate. Secondary outcomes included time to death (overall mortality); the incidence of treatment-emergent serious adverse events; proportion of discharged patients at 7, 30, and 60 days; time to hospital discharge; and ventilation-free days.
    Results: No treatment-related adverse events were reported. Mortality (60-day) in the intention-to-treat population was reduced with 15 mL ExoFlo mixed with 85 mL normal saline (ExoFlo-15) compared with placebo (not significant, χ
    Interpretation: The 15 mL dose of ExoFlo was found to be safe in patients with severe or critical COVID-19-associated respiratory failure. In participants aged 18 to 65 years, the risk reduction in 60-day mortality was further improved from subjects of all ages in the intention-to-treat population after two doses of 15 mL of ExoFlo compared with placebo.
    Clinical trial registration: ClinicalTrials.gov; No.: NCT04493242; URL: www.
    Clinicaltrials: gov.
    MeSH term(s) Humans ; COVID-19/complications ; COVID-19/therapy ; Prospective Studies ; Treatment Outcome ; Respiratory Insufficiency ; Respiratory Distress Syndrome/therapy ; Extracellular Vesicles ; Mesenchymal Stem Cells ; Double-Blind Method
    Language English
    Publishing date 2023-06-23
    Publishing country United States
    Document type Randomized Controlled Trial ; Multicenter Study ; Clinical Trial, Phase II ; Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1032552-9
    ISSN 1931-3543 ; 0012-3692
    ISSN (online) 1931-3543
    ISSN 0012-3692
    DOI 10.1016/j.chest.2023.06.024
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Genomic and transcriptomic analyses identify a prognostic gene signature and predict response to therapy in pleural and peritoneal mesothelioma.

    Nair, Nishanth Ulhas / Jiang, Qun / Wei, Jun Stephen / Misra, Vikram Alexander / Morrow, Betsy / Kesserwan, Chimene / Hermida, Leandro C / Lee, Joo Sang / Mian, Idrees / Zhang, Jingli / Lebensohn, Alexandra / Miettinen, Markku / Sengupta, Manjistha / Khan, Javed / Ruppin, Eytan / Hassan, Raffit

    Cell reports. Medicine

    2023  Volume 4, Issue 2, Page(s) 100938

    Abstract: Malignant mesothelioma is an aggressive cancer with limited treatment options and poor prognosis. A better understanding of mesothelioma genomics and transcriptomics could advance therapies. Here, we present a mesothelioma cohort of 122 patients along ... ...

    Abstract Malignant mesothelioma is an aggressive cancer with limited treatment options and poor prognosis. A better understanding of mesothelioma genomics and transcriptomics could advance therapies. Here, we present a mesothelioma cohort of 122 patients along with their germline and tumor whole-exome and tumor RNA sequencing data as well as phenotypic and drug response information. We identify a 48-gene prognostic signature that is highly predictive of mesothelioma patient survival, including CCNB1, the expression of which is highly predictive of patient survival on its own. In addition, we analyze the transcriptomics data to study the tumor immune microenvironment and identify synthetic-lethality-based signatures predictive of response to therapy. This germline and somatic whole-exome sequencing as well as transcriptomics data from the same patient are a valuable resource to address important biological questions, including prognostic biomarkers and determinants of treatment response in mesothelioma.
    MeSH term(s) Humans ; Mesothelioma, Malignant ; Prognosis ; Transcriptome ; Lung Neoplasms/drug therapy ; Mesothelioma/drug therapy ; Mesothelioma/metabolism ; Mesothelioma/pathology ; Genomics ; Tumor Microenvironment
    Language English
    Publishing date 2023-02-10
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Intramural
    ISSN 2666-3791
    ISSN (online) 2666-3791
    DOI 10.1016/j.xcrm.2023.100938
    Database MEDical Literature Analysis and Retrieval System OnLINE

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