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Article ; Online: Highly efficient nanocomposite of Y

Song, Jiaying / Lu, Lun / Wang, Jian / Li, Xue / Li, Jinying / Wang, Qianwen / Du, Haiyan / Xin, Shuaishuai / Xu, Lina / Yan, Qinghua / Zhou, Chengzhi / Liu, Guocheng / Xin, Yanjun

Bioresource technology

2023 Volume 385, Page(s) 129380

Abstract: Nano Y ...

Abstract	Nano Y
MeSH term(s)	Oxytetracycline ; Adsorption ; Charcoal/chemistry ; Cations ; Nanocomposites ; Water Pollutants, Chemical/chemistry ; Kinetics ; Spectroscopy, Fourier Transform Infrared
Chemical Substances	Oxytetracycline (X20I9EN955) ; biochar ; Charcoal (16291-96-6) ; Cations ; Water Pollutants, Chemical
Language	English
Publishing date	2023-06-24
Publishing country	England
Document type	Journal Article
ZDB-ID	1065195-0
ISSN	1873-2976 ; 0960-8524
ISSN (online)	1873-2976
ISSN	0960-8524
DOI	10.1016/j.biortech.2023.129380
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Article: Unraveling the regulatory network of miRNA expression in Potato Y virus-infected of

Song, Hongping / Gao, Xinwen / Song, Liyun / Jiao, Yubing / Shen, Lili / Yang, Jinguang / Li, Changquan / Shang, Jun / Wang, Hui / Zhang, Songbai / Li, Ying

Frontiers in genetics

2024 Volume 14, Page(s) 1290466

Abstract: Potato virus Y (PVY) disease is a global problem that causes significant damage to crop quality and ...

Abstract	Potato virus Y (PVY) disease is a global problem that causes significant damage to crop quality and yield. As traditional chemical control methods are ineffective against PVY, it is crucial to explore new control strategies. MicroRNAs (miRNAs) play a crucial role in plant and animal defense responses to biotic and abiotic stresses. These endogenous miRNAs act as a link between antiviral gene pathways and host immunity. Several miRNAs target plant immune genes and are involved in the virus infection process. In this study, we conducted small RNA sequencing and transcriptome sequencing on healthy and PVY-infected
Language	English
Publishing date	2024-01-08
Publishing country	Switzerland
Document type	Journal Article
ZDB-ID	2606823-0
ISSN	1664-8021
ISSN	1664-8021
DOI	10.3389/fgene.2023.1290466
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Article: Fabrication and Luminescence Properties of Highly Transparent Green-Emitting Ho:Y

Liu, Yan / Qin, Xianpeng / Gan, Lin / Zhou, Guohong / Hu, Song / Wang, Zhengjuan / Jiang, Juan / Zhang, Tianjin / Chen, Hetuo

Materials (Basel, Switzerland)

2024 Volume 17, Issue 2

Abstract: Highly transparent Ho:Y ...

Abstract	Highly transparent Ho:Y
Language	English
Publishing date	2024-01-13
Publishing country	Switzerland
Document type	Journal Article
ZDB-ID	2487261-1
ISSN	1996-1944
ISSN	1996-1944
DOI	10.3390/ma17020402
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Article ; Online: Correction: Dong, W.; Song, Y. The Significance of Flavonoids in the Process of Biological Nitrogen Fixation.

Dong, Wei / Song, Yuguang

International journal of molecular sciences

2024 Volume 25, Issue 8

Abstract: In the original publication [ ... ]. ...

Abstract	In the original publication [...].
Language	English
Publishing date	2024-04-09
Publishing country	Switzerland
Document type	Published Erratum
ZDB-ID	2019364-6
ISSN	1422-0067 ; 1422-0067 ; 1661-6596
ISSN (online)	1422-0067
ISSN	1422-0067 ; 1661-6596
DOI	10.3390/ijms25084144
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Article ; Online: Genome-wide identification and expression analysis of NF-Y gene family in tobacco (Nicotiana tabacum L.).

Tian, Yue / Song, Kangkang / Li, Bin / Song, Yanru / Zhang, Xiaohua / Li, Haozhen / Yang, Long

Scientific reports

2024 Volume 14, Issue 1, Page(s) 5257

Abstract: Nuclear factor Y (NF-Y) gene family is an important transcription factor composed of three ... In this study, 63 tobacco NF-Y genes (NtNF-Ys) were identified in Nicotiana tabacum L., including 17 NtNF-YAs ... Transcriptome analysis showed that more than half of the NtNF-Y genes were expressed in all tissues, and NtNF-YB9/B14/B15 ...

Abstract	Nuclear factor Y (NF-Y) gene family is an important transcription factor composed of three subfamilies of NF-YA, NF-YB and NF-YC, which is involved in plant growth, development and stress response. In this study, 63 tobacco NF-Y genes (NtNF-Ys) were identified in Nicotiana tabacum L., including 17 NtNF-YAs, 30 NtNF-YBs and 16 NtNF-YCs. Phylogenetic analysis revealed ten pairs of orthologues from tomato and tobacco and 25 pairs of paralogues from tobacco. The gene structure of NtNF-YAs exhibited similarities, whereas the gene structure of NtNF-YBs and NtNF-YCs displayed significant differences. The NtNF-Ys of the same subfamily exhibited a consistent distribution of motifs and protein 3D structure. The protein interaction network revealed that NtNF-YC12 and NtNF-YC5 exhibited the highest connectivity. Many cis-acting elements related to light, stress and hormone response were found in the promoter of NtNF-Ys. Transcriptome analysis showed that more than half of the NtNF-Y genes were expressed in all tissues, and NtNF-YB9/B14/B15/B16/B17/B29 were specifically expressed in roots. A total of 15, 12, 5, and 6 NtNF-Y genes were found to respond to cold, drought, salt, and alkali stresses, respectively. The results of this study will lay a foundation for further study of NF-Y genes in tobacco and other Solanaceae plants.
MeSH term(s)	Nicotiana/genetics ; Phylogeny ; CCAAT-Binding Factor/genetics ; Solanaceae
Chemical Substances	nuclear factor Y ; CCAAT-Binding Factor
Language	English
Publishing date	2024-03-04
Publishing country	England
Document type	Journal Article
ZDB-ID	2615211-3
ISSN	2045-2322 ; 2045-2322
ISSN (online)	2045-2322
ISSN	2045-2322
DOI	10.1038/s41598-024-55799-8
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Article ; Online: Where Are the Formerly Y-linked Genes in the Ryukyu Spiny Rat that has Lost its Y Chromosome?

Li, Jiachen / Song, Siliang / Zhang, Jianzhi

Genome biology and evolution

2024 Volume 16, Issue 3

Abstract: It has been predicted that the highly degenerate mammalian Y chromosome will be lost eventually ... Indeed, Y was lost in the Ryukyu spiny rat Tokudaia osimensis, but the fate of the formerly Y-linked ... genes is not completely known. We looked for all 12 ancestrally Y-linked genes in a draft T. osimensis ...

Abstract	It has been predicted that the highly degenerate mammalian Y chromosome will be lost eventually. Indeed, Y was lost in the Ryukyu spiny rat Tokudaia osimensis, but the fate of the formerly Y-linked genes is not completely known. We looked for all 12 ancestrally Y-linked genes in a draft T. osimensis genome sequence. Zfy1, Zfy2, Kdm5d, Eif2s3y, Usp9y, Uty, and Ddx3y are putatively functional and are now located on the X chromosome, whereas Rbmy, Uba1y, Ssty1, Ssty2, and Sry are missing or pseudogenized. Tissue expressions of the mouse orthologs of the retained genes are significantly broader/higher than those of the lost genes, suggesting that the destinies of the formerly Y-linked genes are related to their original expressions. Interestingly, patterns of gene retention/loss are significantly more similar than by chance across four rodent lineages where Y has been independently lost, indicating a level of certainty in the fate of Y-linked genes even when the chromosome is gone.
MeSH term(s)	Humans ; Mice ; Rats ; Animals ; Genes, Y-Linked ; Y Chromosome/genetics ; Murinae/genetics ; X Chromosome/genetics ; Genome ; Chromosomes, Human, Y ; DNA-Binding Proteins/genetics ; Transcription Factors/genetics
Chemical Substances	Zfy1 protein, mouse ; DNA-Binding Proteins ; Transcription Factors ; Zfy2 protein, mouse
Language	English
Publishing date	2024-03-11
Publishing country	England
Document type	Journal Article
ZDB-ID	2495328-3
ISSN	1759-6653 ; 1759-6653
ISSN (online)	1759-6653
ISSN	1759-6653
DOI	10.1093/gbe/evae046
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Article ; Online: Resumen: Consenso internacional para la nomenclatura y clasificación de la válvula aórtica bicúspide congénita y su aortopatía, con fines clínicos, quirúrgicos, intervencionistas y de investigación.

Michelena, Hector I / Della Corte, Alessandro / Evangelista, Arturo / Maleszewski, Joseph J / Edwards, William D / Roman, Mary J / Devereux, Richard B / Fernández, Borja / Asch, Federico M / Barker, Alex J / Sierra, Lilia M / de Kerchove, Laurent / Fernandes, Susan M / Fedak, Paul W M / Girdauskas, Evaldas / Delgado, Victoria / Abbara, Suhny / Lansac, Emmanuel / Prakash, Siddharth K /

Bissell, Malenka M / Popescu, Bogdan A / Hope, Michael D / Sitges, Marta / Thourani, Vinod H / Pibarot, Phillippe / Chandrasekaran, Krishnaswamy / Lancellotti, Patrizio / Borger, Michael A / Forrest, John K / Webb, John / Milewicz, Dianna M / Makkar, Raj / Leon, Martin B / Sanders, Stephen P / Markl, Michael / Ferrari, Victor A / Roberts, William C / Song, Jae-Kwan / Blanke, Philipp / White, Charles S / Siu, Samuel / Svensson, Lars G / Braverman, Alan C / Bavaria, Joseph / Sundt, Thoralf M / El Khoury, Gebrine / de Paulis, Ruggero / Enriquez-Sarano, Maurice / Bax, Jeroen J / Otto, Catherine M / Schäfers, Hans-Joachim

Archivos de cardiologia de Mexico

2024 Volume 94, Issue 2, Page(s) 219–239

Abstract: This consensus of nomenclature and classification for congenital bicuspid aortic valve and its aortopathy is evidence-based and intended for universal use by physicians (both pediatricians and adults), echocardiographers, advanced cardiovascular imaging ... ...

Title translation	Summary: International consensus statement on nomenclature and classification of the congenital bicuspid aortic valve and its aortopathy, for clinical, surgical, interventional and research purposes.
Abstract	This consensus of nomenclature and classification for congenital bicuspid aortic valve and its aortopathy is evidence-based and intended for universal use by physicians (both pediatricians and adults), echocardiographers, advanced cardiovascular imaging specialists, interventional cardiologists, cardiovascular surgeons, pathologists, geneticists, and researchers spanning these areas of clinical and basic research. In addition, as long as new key and reference research is available, this international consensus may be subject to change based on evidence-based data1.
Language	Spanish
Publishing date	2024-02-07
Publishing country	Mexico
Document type	English Abstract ; Journal Article
ZDB-ID	2059019-2
ISSN	1665-1731 ; 1665-1731
ISSN (online)	1665-1731
ISSN	1665-1731
DOI	10.24875/ACM.24000002
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Article ; Online: Comparative Lysine Acetylome Analysis of Y. pestis YfiQ/CobB Mutants Reveals that Acetylation of SlyA Lys73 Significantly Promotes Biofilm Formation of Y. pestis.

Tan, Yafang / Liu, Wanbing / Chen, Yuling / Zhou, Yazhou / Song, Kai / Cao, Shiyang / Zhang, Yuan / Song, Yajun / Deng, Haiteng / Yang, Ruifu / Du, Zongmin

Microbiology spectrum

2023 Volume 11, Issue 4, Page(s) e0046023

Abstract: ... unclear. Here, we found more acetylated proteins and a higher degree of acetylation in Y. pestis grown ... of YfiQ and CobB, the major acetyltransferase and deacetylase of Y. pestis, respectively, identified 23 ...

Abstract	Increasing evidence shows that protein lysine acetylation is involved in almost every aspect of cellular physiology in bacteria. Yersinia pestis is a flea-borne pathogen responsible for millions of human deaths in three global pandemics. However, the functional role of lysine acetylation in this pathogen remains unclear. Here, we found more acetylated proteins and a higher degree of acetylation in Y. pestis grown under mammalian host (Mh) conditions than under flea vector (Fv) conditions, suggesting that protein acetylation could significantly change during fleabite transmission. Comparative acetylome analysis of mutants of YfiQ and CobB, the major acetyltransferase and deacetylase of Y. pestis, respectively, identified 23 YfiQ-dependent and 315 CobB-dependent acetylated proteins. Further results demonstrated that acetylation of Lys73 of the SlyA protein, a MarR-family transcriptional regulator, inhibits its binding to the promoter of target genes, including
MeSH term(s)	Animals ; Humans ; Yersinia pestis/metabolism ; Plague/microbiology ; Lysine/metabolism ; Acetylation ; Siphonaptera/microbiology ; Biofilms ; Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; Mammals
Chemical Substances	Lysine (K3Z4F929H6) ; Bacterial Proteins
Language	English
Publishing date	2023-07-17
Publishing country	United States
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2807133-5
ISSN	2165-0497 ; 2165-0497
ISSN (online)	2165-0497
ISSN	2165-0497
DOI	10.1128/spectrum.00460-23
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Article ; Online: Enhancing fluoride removal from wastewater using Al/Y amended sludge biochar.

Li, Shushu / Song, Mingshan / Tong, Lin / Ye, Changqing / Yang, Yuhuan / Zhou, Qingwen

Environmental science and pollution research international

2023 Volume 30, Issue 60, Page(s) 125832–125845

Abstract: This study explored the potential of utilizing aluminum and yttrium amended (Al/Y amended ... sewage sludge biochar (Al/Y-CSBC) for efficient fluoride removal from wastewater. The adsorption kinetics ... of fluoride on bimetallic modified Al/Y-CSBC followed the pseudo-second-order model, while the adsorption ...

Abstract	This study explored the potential of utilizing aluminum and yttrium amended (Al/Y amended) sewage sludge biochar (Al/Y-CSBC) for efficient fluoride removal from wastewater. The adsorption kinetics of fluoride on bimetallic modified Al/Y-CSBC followed the pseudo-second-order model, while the adsorption isotherm conformed to the Freundlich equation. Remarkably, the material exhibited excellent fluoride removal performance over a wide pH range, achieving a maximum adsorption capacity of 62.44 mg·g
MeSH term(s)	Sewage ; Wastewater ; Fluorides ; Aluminum ; Charcoal/chemistry ; Adsorption ; Kinetics ; Yttrium ; Water Pollutants, Chemical
Chemical Substances	Sewage ; Wastewater ; Fluorides (Q80VPU408O) ; biochar ; Aluminum (CPD4NFA903) ; Charcoal (16291-96-6) ; Yttrium (58784XQC3Y) ; Water Pollutants, Chemical
Language	English
Publishing date	2023-11-25
Publishing country	Germany
Document type	Journal Article
ZDB-ID	1178791-0
ISSN	1614-7499 ; 0944-1344
ISSN (online)	1614-7499
ISSN	0944-1344
DOI	10.1007/s11356-023-31147-7
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Article ; Online: On-chip Y-junction with adaptive power splitting toward ultrabroad bandwidth.

Wu, You / Guo, Xiaoyuan / Zhang, Zimeng / Xiao, Shumin / Song, Qinghai / Xu, Ke

Optics letters

2023 Volume 48, Issue 16, Page(s) 4368–4371

Abstract: ... optimized Y-junction with a shallow-etched trench and its utility to reverse the detrimental dispersion ... effect. The shallow trench enables the Y-junction to have an adaptive splitting capability over a broad ...

Abstract	Growing research interests have been directed to the emerging optical communication band at 2-µm wavelengths. The silicon photonic components are highly desired to operate over a broad bandwidth covering both C-band and the emerging 2-µm wave band. However, the dispersions of the silicon waveguides eventually limit the optical bandwidth of the silicon photonic devices. Here, we introduce a topology-optimized Y-junction with a shallow-etched trench and its utility to reverse the detrimental dispersion effect. The shallow trench enables the Y-junction to have an adaptive splitting capability over a broad spectral range. The 0.2-dB bandwidth of the power splitter exceeds 800 nm from 1400 nm to 2200 nm. The device has a compact footprint of 3 µm × 1.64 µm. The device is characterized at the C-band and 2-µm band with a measured excess loss below 0.4 dB for a proof-of-concept demonstration.
Language	English
Publishing date	2023-08-15
Publishing country	United States
Document type	Journal Article
ISSN	1539-4794
ISSN (online)	1539-4794
DOI	10.1364/OL.497530
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