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  1. Article ; Online: Prohibitin and the extracellular matrix are upregulated in murine alveolar epithelial cells with LPS‑induced acute injury.

    Zhang, Feng / Fan, Dejun / Mo, Xiao-Neng

    Molecular medicine reports

    2018  Volume 17, Issue 6, Page(s) 7769–7773

    Abstract: Inflammation of epithelial and endothelial cells accelerates the progress of acute lung injury (ALI), and pulmonary fibrosis is the leading cause of mortality in patients with acute respiratory distress syndrome. Interleukin‑6 (IL‑6) is a pleiotropic ... ...

    Abstract Inflammation of epithelial and endothelial cells accelerates the progress of acute lung injury (ALI), and pulmonary fibrosis is the leading cause of mortality in patients with acute respiratory distress syndrome. Interleukin‑6 (IL‑6) is a pleiotropic cytokine implicated in the pathogenesis of a number of immune‑mediated disorders, and is involved in pulmonary fibrosis. Prohibitin (PHB) is a highly conserved protein implicated in various cellular functions, including proliferation, apoptosis, tumor suppression, transcription and mitochondrial protein folding. PHB was identified to be associated with a variety of pulmonary diseases, including pulmonary fibrosis. Based on the lipopolysaccharide (LPS)‑induced cell model of ALI, the present study examined the expression of PHB and the extracellular matrix (ECM) in the process of pulmonary inflammation. MLE‑12 cells were divided into 2 groups: The control group was administered sterile PBS; the treatment group was administered 500 ng/ml LPS for 12 h. The mRNA expression of IL‑6 in the treatment group was significantly upregulated compared with the control group (P<0.05). The protein expression of IL‑6 in the treatment group was markedly increased compared with the control group (P<0.05). ECM components, including collagen‑IV and fibronectin, in the treatment group were markedly increased when compared with the control group (P<0.05). The mRNA and protein expression levels of PHB1 and PHB2 were significantly upregulated following treatment with LPS (both P<0.05). The present study identified that PHB and ECM component levels increased in the LPS‑induced ALI cell model, and further investigations may be performed to verify the detailed mechanism.
    MeSH term(s) Acute Lung Injury/etiology ; Acute Lung Injury/metabolism ; Acute Lung Injury/pathology ; Alveolar Epithelial Cells/metabolism ; Alveolar Epithelial Cells/pathology ; Animals ; Cell Line ; Extracellular Matrix/metabolism ; Gene Expression Regulation ; Humans ; Interleukin-6/genetics ; Interleukin-6/metabolism ; Lipopolysaccharides/adverse effects ; Mice ; RNA, Messenger/genetics ; Repressor Proteins/metabolism
    Chemical Substances Interleukin-6 ; Lipopolysaccharides ; RNA, Messenger ; Repressor Proteins ; prohibitin
    Language English
    Publishing date 2018-03-28
    Publishing country Greece
    Document type Journal Article
    ISSN 1791-3004
    ISSN (online) 1791-3004
    DOI 10.3892/mmr.2018.8808
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: RETRACTED: Association of Angiotensin-Converting Enzyme Insertion/Deletion Gene Polymorphism With Lung Cancer Susceptibility.

    Mo, Xiao-Neng / Yang, Ri-Wen / Zhang, Feng / Dong, Yu / Zhao, Zi-Wen

    publication RETRACTED

    Technology in cancer research & treatment

    2017  Volume 16, Issue 1, Page(s) NP1–NP5

    Language English
    Publishing date 2017
    Publishing country United States
    Document type Journal Article ; Retracted Publication
    ZDB-ID 2146365-7
    ISSN 1533-0338 ; 1533-0346
    ISSN (online) 1533-0338
    ISSN 1533-0346
    DOI 10.1177/1533034615625004
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Serum amyloid A is a predictor for prognosis of COVID-19.

    Mo, Xiao-Neng / Su, Zhu-Quan / Lei, Chun-Liang / Chen, Di-Fei / Peng, Hui / Chen, Ru-Chong / Sang, Ling / Wu, Hong-Kai / Li, Shi-Yue

    Respirology (Carlton, Vic.)

    2020  Volume 25, Issue 7, Page(s) 764–765

    Keywords covid19
    Language English
    Publishing date 2020-05-14
    Publishing country Australia
    Document type Letter
    ZDB-ID 1435849-9
    ISSN 1440-1843 ; 1323-7799
    ISSN (online) 1440-1843
    ISSN 1323-7799
    DOI 10.1111/resp.13840
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Association of Megsin gene polymorphism with IgA nephropathy risk.

    Zhou, Tian-Biao / Mo, Xiao-Neng / Kou, Qiu-Ye / Jiang, Zong-Pei / Xiong, Meng-Ran

    Journal of receptor and signal transduction research

    2015  Volume 35, Issue 2, Page(s) 122–126

    Abstract: This meta-analysis was conducted to assess the association of Megsin 2093C/T, 2180C/T, C25663G gene polymorphism with the risk of IgA nephropathy (IgAN). The association literatures were identified from PubMed, Embase, Cochrane Library and CBM-disc ( ... ...

    Abstract This meta-analysis was conducted to assess the association of Megsin 2093C/T, 2180C/T, C25663G gene polymorphism with the risk of IgA nephropathy (IgAN). The association literatures were identified from PubMed, Embase, Cochrane Library and CBM-disc (China Biological Medicine Database) on 1 January 2014, and eligible reports were recruited and synthesized. Seven eligible reports were recruited into this meta-analysis for the association of Megsin 2093C/T, 2180C/T, C25663G gene polymorphism with IgAN risk. In this meta-analysis, the association of Megsin 2093C/T TT genotype with IgAN risk in Asians was found. Interestingly, Megsin C25663G G allele and GG genotype were associated with the risk of IgAN in Asian population. However, Megsin 2180C/T gene polymorphism was not associated with IgAN risk in Asians. In conclusion, Megsin 2093C/T TT genotype, and C25663G G allele and GG genotype were associated with the risk of IgAN in Asian population. However, more studies should be performed in the future to confirm this association.
    MeSH term(s) Alleles ; Asian Continental Ancestry Group/genetics ; Genetic Association Studies ; Genetic Predisposition to Disease ; Genotype ; Glomerulonephritis, IGA/genetics ; Glomerulonephritis, IGA/pathology ; Humans ; Polymorphism, Single Nucleotide ; Serpins/genetics
    Chemical Substances SERPINB7 protein, human ; Serpins
    Language English
    Publishing date 2015-04
    Publishing country England
    Document type Journal Article ; Meta-Analysis ; Research Support, Non-U.S. Gov't
    ZDB-ID 1230969-2
    ISSN 1532-4281 ; 1079-9893
    ISSN (online) 1532-4281
    ISSN 1079-9893
    DOI 10.3109/10799893.2014.936461
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: Serum amyloid A is a predictor for prognosis of COVID-19

    Mo, Xiao-Neng / Su, Zhu-Quan / Lei, Chun-Liang / Chen, Di-Fei / Peng, Hui / Chen, Ru-Chong / Sang, Ling / Wu, Hong-Kai / Li, Shi-Yue

    Respirology

    Keywords covid19
    Publisher WHO
    Document type Article
    Note WHO #Covidence: #260076
    Database COVID19

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  6. Article ; Online: Serum amyloid A is a predictor for prognosis of COVID ‐19

    Mo, Xiao‐Neng / Su, Zhu‐Quan / Lei, Chun‐Liang / Chen, Di‐Fei / Peng, Hui / Chen, Ru‐Chong / Sang, Ling / Wu, Hong‐Kai / Li, Shi‐Yue

    Respirology

    2020  Volume 25, Issue 7, Page(s) 764–765

    Keywords Pulmonary and Respiratory Medicine ; covid19
    Language English
    Publisher Wiley
    Publishing country us
    Document type Article ; Online
    ZDB-ID 1435849-9
    ISSN 1440-1843 ; 1323-7799
    ISSN (online) 1440-1843
    ISSN 1323-7799
    DOI 10.1111/resp.13840
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  7. Article ; Online: De Novo SNP Discovery and Genotyping of Masson Pine (Pinus massoniana Lamb.) via Genotyping-by-Sequencing

    Li, Peng-Le / Yang, Mo-Hua / Jiang, Xiao-Long / Xiong, Huan / Duan, Hui-Liang / Zou, Feng-Lan / Xu, Qian-Yu / Wang, Wei / Hong, Yong-hŭi / Lin, Neng-Qing

    Forests. 2023 Feb. 14, v. 14, no. 2

    2023  

    Abstract: Masson pine (Pinus massoniana Lamb.) is an important tree species in China, but its genomic research has been hindered due to a large genome size. Genotyping-by-sequencing (GBS) has been a powerful approach to revolutionize the field of genomic research ... ...

    Abstract Masson pine (Pinus massoniana Lamb.) is an important tree species in China, but its genomic research has been hindered due to a large genome size. Genotyping-by-sequencing (GBS) has been a powerful approach to revolutionize the field of genomic research by facilitating the discovery of thousands of single nucleotide polymorphisms (SNPs) and genotyping in non-model organisms, at relatively low cost. Here, we performed de novo SNP discovery and genotyping in 299 trees via the genotyping-by-sequencing (GBS) approach. The effort produced 9.33 × 10⁹ sequence reads, 265,525 SNP-associated contigs, and 6,739,240 raw SNPs. Further filtering and validation of the SNP-associated contigs for reliable SNPs were performed using blasting against the Pinus tabuliformis reference genome, functional annotation, technical replicates, and custom parameter settings for the optimization. The 159,372 SNP-associated contigs were aligned and validated for SNP prediction, in which 60,038 contigs were searched with hits in the NCBI nr database. We further improved the SNP discovery and genotyping with multiple technical replicates and custom parameter settings filtering. It was found that the use of blasting, annotation, technical replicates, and specific parameter settings removed many unreliable SNPs and identified 20,055 more precise and reliable SNPs from the 10,712 filtered contigs. We further demonstrated the informativeness of the identified SNPs in the inference of some genetic diversity and structure. These findings should be useful to stimulate genomic research and genomics-assisted breeding of Masson pine.
    Keywords Pinus massoniana ; Pinus tabuliformis ; databases ; genetic variation ; genome ; genomics ; genotyping by sequencing ; prediction ; trees ; China
    Language English
    Dates of publication 2023-0214
    Publishing place Multidisciplinary Digital Publishing Institute
    Document type Article ; Online
    ZDB-ID 2527081-3
    ISSN 1999-4907
    ISSN 1999-4907
    DOI 10.3390/f14020387
    Database NAL-Catalogue (AGRICOLA)

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  8. Article ; Online: Vascular smooth muscle cells in low SYNTAX scores coronary artery disease exhibit proinflammatory transcripts and proteins correlated with IL1B activation.

    Dorajoo, Rajkumar / Ihsan, Mario Octavianus / Liu, Wenting / Lim, Hwee Ying / Angeli, Veronique / Park, Sung-Jin / Chan, Joyce M S / Lin, Xiao Yun / Ong, Mei Shan / Muniasamy, Umamaheswari / Lee, Chi-Hang / Gurung, Rijan / Ho, Hee Hwa / Foo, Roger / Liu, Jianjun / Kofidis, Theo / Lee, Chuen Neng / Sorokin, Vitaly A

    Atherosclerosis

    2022  Volume 365, Page(s) 15–24

    Abstract: Background and aims: The SYNTAX score is clinically validated to stratify number of lesions and pattern of CAD. A better understanding of the underlying molecular mechanisms influencing the pattern and complexity of coronary arteries lesions among CAD ... ...

    Abstract Background and aims: The SYNTAX score is clinically validated to stratify number of lesions and pattern of CAD. A better understanding of the underlying molecular mechanisms influencing the pattern and complexity of coronary arteries lesions among CAD patients is needed.
    Methods: Human arterial biopsies from 49 patients (16 low-SYNTAX-score (LSS, <23), 16 intermediate-SYNTAX-score (ISS, 23 to 32) and 17 high-SYNTAX-score (HSS, >32)) were evaluated using Affymetrix GeneChip® Human Genome U133 Plus 2.0 microarray. The data were validated by Next-Generation Sequencing (NGS). Primary VSMC from patients with low and high SYNTAX scores were isolated and compared using immunohistochemistry, qPCR and immunoblotting to confirm mRNA and proteomic results.
    Results: The IL1B was verified as the top upstream regulator of 47 inflammatory DEGs in LSS patients and validated by another sets of patient samples using NGS analysis. The upregulated expression of IL1B was translated to increased level of IL1β protein in the LSS tissue based on immunohistochemical quantitative analysis. Plausibility of idea that IL1B in the arterial wall could be originated from VSMC was checked by exposing culture to proinflammatory conditions where IL1B came out as the top DEG (logFC = 7.083, FDR = 1.38 × 10
    Conclusions: LSS patients could represent a group of patients where IL1B could play a substantial role in disease pathogenesis. The LSS group could represent a plausible cohort of patients for whom anti-inflammatory therapy could be considered.
    MeSH term(s) Humans ; Coronary Artery Disease/pathology ; Muscle, Smooth, Vascular/pathology ; Proteomics ; Coronary Angiography ; Severity of Illness Index ; Interleukin-1beta
    Chemical Substances IL1B protein, human ; Interleukin-1beta
    Language English
    Publishing date 2022-12-17
    Publishing country Ireland
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 80061-2
    ISSN 1879-1484 ; 0021-9150
    ISSN (online) 1879-1484
    ISSN 0021-9150
    DOI 10.1016/j.atherosclerosis.2022.12.005
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Full-Length Transcript-Based Proteogenomics of Rice Improves Its Genome and Proteome Annotation.

    Chen, Mo-Xian / Zhu, Fu-Yuan / Gao, Bei / Ma, Kai-Long / Zhang, Youjun / Fernie, Alisdair R / Chen, Xi / Dai, Lei / Ye, Neng-Hui / Zhang, Xue / Tian, Yuan / Zhang, Di / Xiao, Shi / Zhang, Jianhua / Liu, Ying-Gao

    Plant physiology

    2019  Volume 182, Issue 3, Page(s) 1510–1526

    Abstract: Rice ( ...

    Abstract Rice (
    MeSH term(s) Oryza/genetics ; Oryza/metabolism ; Proteogenomics/methods ; Proteome/metabolism ; RNA, Antisense/genetics ; Sequence Analysis, RNA ; Transcriptome
    Chemical Substances Proteome ; RNA, Antisense
    Language English
    Publishing date 2019-12-19
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 208914-2
    ISSN 1532-2548 ; 0032-0889
    ISSN (online) 1532-2548
    ISSN 0032-0889
    DOI 10.1104/pp.19.00430
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article: [The action of active efflux system on multi-drug resistance in methicillin resistant Staphylococcus aureus].

    Mo, Xiao-neng / Li, Jian-guo / Tang, Ying-chun / Zhang, Yong / Zhu, Jia-xin / Tan, Shu-qing / Lu, Jian

    Zhonghua jie he he hu xi za zhi = Zhonghua jiehe he huxi zazhi = Chinese journal of tuberculosis and respiratory diseases

    2007  Volume 30, Issue 1, Page(s) 40–43

    Abstract: Objective: To study the active efflux gene qacB, qacJ and smr in methicillin resistant Staphylococcus aureus (MRSA) and to investigate their effect on the multi-drug resistance (MDR) of MRSA.: Methods: The three pairs of ideal primers of active ... ...

    Abstract Objective: To study the active efflux gene qacB, qacJ and smr in methicillin resistant Staphylococcus aureus (MRSA) and to investigate their effect on the multi-drug resistance (MDR) of MRSA.
    Methods: The three pairs of ideal primers of active efflux gene qacB, qacJ and smr were designed by computer with Primer Premier 5.0 software. A total of 124 clinical isolates of MRSA were amplified respectively by polymerase chain reaction (PCR) with above mentioned primers. The PCR products were separated by electrophoresis on an 1.5% agarose gel with 0.5 microg/ml ethidium bromide. Reserpine inhibition test was used to observe the changes of the susceptibility to antibiotics of MRSA which had qacB, qacJ and smr genes separately.
    Results: Of the 124 strains of MRSA, 86 strains had qacB, 45 strains had qacJ and 32 strains had smr gene. Reserpine inhibition test showed that the minimal inhibitory concentration (MIC) decreased 2 to 32 times for MRSA to levofloxacin and rifampin.
    Conclusion: MRSA have qacB, qacJ and smr active efflux systems, which play a very important role in multiple antibiotic resistance.
    MeSH term(s) DNA, Bacterial/genetics ; Drug Resistance, Multiple, Bacterial/genetics ; Genes, Bacterial ; Methicillin Resistance/genetics ; Methicillin-Resistant Staphylococcus aureus/genetics ; Methicillin-Resistant Staphylococcus aureus/metabolism ; Methicillin-Resistant Staphylococcus aureus/physiology
    Chemical Substances DNA, Bacterial
    Language Chinese
    Publishing date 2007-01
    Publishing country China
    Document type English Abstract ; Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1027965-9
    ISSN 1001-0939
    ISSN 1001-0939
    Database MEDical Literature Analysis and Retrieval System OnLINE

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