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  1. Article ; Online: Adult patients with tetanus in Slovenia 2006-2021 : Results of a national cohort study.

    Grasselli Kmet, Nina / Muzlovič, Igor / Martinčič, Žiga / Štubljar, David / Jereb, Matjaž

    Wiener klinische Wochenschrift

    2023  Volume 135, Issue 21-22, Page(s) 625–630

    Abstract: Introduction: The aim of the present study was to determine the demographic, epidemiological and clinical characteristics of adult patients with tetanus in Slovenia between 2006 and 2021, as well as to determine the therapeutic approaches which have ... ...

    Abstract Introduction: The aim of the present study was to determine the demographic, epidemiological and clinical characteristics of adult patients with tetanus in Slovenia between 2006 and 2021, as well as to determine the therapeutic approaches which have been successfully used in the intensive care unit (ICU) of the Infectious Diseases Department in the University Medical Centre Ljubljana (UMC).
    Methods: We included all adult patients who were treated for tetanus in the ICU of the Department of Infectious Diseases Ljubljana between January 1st, 2006, and December 31th, 2021, in the retrospective study. Available epidemiological and clinical characteristics were reviewed from the medical documentation.
    Results: There were 31 patients included in the study, four (12.9%) males and 27 (87.1%) females. The vast majority of patients required mechanical ventilation (MV) (87.1%) which lasted (± SD) on average 35.4 ± 16.0 days. Autonomic dysfunction was present in 29 (93.5%) patients and was statistically significantly associated with shorter disease evolution (p = 0.005) and presence of healthcare-associated infection (p = 0.020). During the hospitalization, 27 (87.1%) patients acquired at least one healthcare-associated infection, most commonly ventilator-associated pneumonia. The average length of stay in the ICU (± SD) was 42.5 ± 21.3 days. With increasing age, MV lasted statistically significantly longer (p = 0.001), length of stay was longer (p = 0.015), and healthcare-associated infections occurred (p = 0.003) more frequently. Four patients (12.9%) died.
    Conclusions: Although the tetanus incidence rate in Slovenia is high in comparison to other European countries on average, our therapeutic approach resulted in a good survival rate and low mortality.
    MeSH term(s) Male ; Female ; Humans ; Adult ; Cohort Studies ; Retrospective Studies ; Tetanus/epidemiology ; Tetanus/therapy ; Slovenia/epidemiology ; Respiration, Artificial ; Intensive Care Units ; Length of Stay ; Communicable Diseases
    Language English
    Publishing date 2023-06-06
    Publishing country Austria
    Document type Journal Article
    ZDB-ID 200462-8
    ISSN 1613-7671 ; 0043-5325 ; 0300-5178
    ISSN (online) 1613-7671
    ISSN 0043-5325 ; 0300-5178
    DOI 10.1007/s00508-023-02222-3
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Severe immune thrombocytopenia in a critically ill COVID-19 patient.

    Martincic, Ziga / Skopec, Barbara / Rener, Karla / Mavric, Matej / Vovko, Tomaz / Jereb, Matjaz / Lukic, Milica

    International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases

    2020  Volume 99, Page(s) 269–271

    Abstract: The novel coronavirus SARS-CoV-2 can cause a severe and even fatal respiratory illness named COVID-19. Apart from respiratory failure, COVID-19 may be associated with various autoimmune complications. We present a case of a critically ill patient with ... ...

    Abstract The novel coronavirus SARS-CoV-2 can cause a severe and even fatal respiratory illness named COVID-19. Apart from respiratory failure, COVID-19 may be associated with various autoimmune complications. We present a case of a critically ill patient with COVID-19 who developed severe immune thrombocytopenia that was successfully treated with a concomitant use of corticosteroids and intravenous immunoglobulins.
    MeSH term(s) Betacoronavirus ; COVID-19 ; Coronavirus Infections/complications ; Critical Illness ; Humans ; Male ; Middle Aged ; Pandemics ; Platelet Transfusion ; Pneumonia, Viral/complications ; Purpura, Thrombocytopenic, Idiopathic/etiology ; Purpura, Thrombocytopenic, Idiopathic/therapy ; SARS-CoV-2
    Keywords covid19
    Language English
    Publishing date 2020-08-06
    Publishing country Canada
    Document type Case Reports ; Journal Article
    ZDB-ID 1331197-9
    ISSN 1878-3511 ; 1201-9712
    ISSN (online) 1878-3511
    ISSN 1201-9712
    DOI 10.1016/j.ijid.2020.08.002
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Intraarticular nodular fasciitis-detection of USP6 gene fusions in three cases by targeted RNA sequencing.

    Stražar, Klemen / Šekoranja, Daja / Matjašič, Alenka / Zupan, Andrej / Snoj, Žiga / Martinčič, David / Pižem, Jože

    Virchows Archiv : an international journal of pathology

    2021  Volume 478, Issue 6, Page(s) 1117–1124

    Abstract: Intraarticular nodular fasciitis arising in the joint synovium is an uncommon lesion. Most cases have been reported in the knee and rarely in other joints. A USP6 gene fusion has so far been documented in only four cases of intraarticular nodular ... ...

    Abstract Intraarticular nodular fasciitis arising in the joint synovium is an uncommon lesion. Most cases have been reported in the knee and rarely in other joints. A USP6 gene fusion has so far been documented in only four cases of intraarticular nodular fasciitis, three were located in the knee and one in the proximal interphalangeal joint. In all three cases located in the knee, MYH9 was detected as a USP6 fusion partner. We analysed three cases of intraarticular nodular fasciitis for the presence of USP6 fusion by targeted RNA sequencing. Two cases were located in the hip (a 25-year-old female and 48-year-old male) and one in the shoulder (a 38-year-old male). We detected a MYH9-USP6 fusion in the two hip cases and a COL1A1-USP6 fusion in the shoulder case. Our findings provide additional evidence that intraarticular nodular fasciitis is a form of nodular fasciitis arising in the joint synovium, harbouring a USP6 fusion. Although a MYH9-USP6 fusion seems to predominate in intraarticular nodular fasciitis, other fusion partners of the USP6 gene may also be involved. Detection of a USP6 fusion by targeted RNA sequencing may assist in confirming the diagnosis in selected cases.
    MeSH term(s) Adolescent ; Adult ; Base Sequence ; Child ; Child, Preschool ; Fasciitis/genetics ; Fasciitis/pathology ; Female ; Fibroma/genetics ; Fibroma/pathology ; Gene Fusion/genetics ; Gene Rearrangement/genetics ; Humans ; Male ; Middle Aged ; Proto-Oncogene Proteins/genetics ; Sequence Analysis, RNA ; Ubiquitin Thiolesterase/genetics ; Young Adult
    Chemical Substances Proto-Oncogene Proteins ; USP6 protein, human (EC 3.4.19.12) ; Ubiquitin Thiolesterase (EC 3.4.19.12)
    Language English
    Publishing date 2021-01-06
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 1184867-4
    ISSN 1432-2307 ; 0945-6317
    ISSN (online) 1432-2307
    ISSN 0945-6317
    DOI 10.1007/s00428-020-02991-6
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Severe immune thrombocytopenia in a critically ill COVID-19 patient

    Ziga Martincic / Barbara Skopec / Karla Rener / Matej Mavric / Tomaz Vovko / Matjaz Jereb / Milica Lukic

    International Journal of Infectious Diseases, Vol 99, Iss , Pp 269-

    2020  Volume 271

    Abstract: The novel coronavirus SARS-CoV-2 can cause a severe and even fatal respiratory illness named COVID-19. Apart from respiratory failure, COVID-19 may be associated with various autoimmune complications. We present a case of a critically ill patient with ... ...

    Abstract The novel coronavirus SARS-CoV-2 can cause a severe and even fatal respiratory illness named COVID-19. Apart from respiratory failure, COVID-19 may be associated with various autoimmune complications. We present a case of a critically ill patient with COVID-19 who developed severe immune thrombocytopenia that was successfully treated with a concomitant use of corticosteroids and intravenous immunoglobulins.
    Keywords COVID-19 ; SARS-CoV-2 ; immune thrombocytopenia ; corticosteroids ; intravenous immunoglobulins ; Infectious and parasitic diseases ; RC109-216 ; covid19
    Language English
    Publishing date 2020-10-01T00:00:00Z
    Publisher Elsevier
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  5. Article ; Online: Severe immune thrombocytopenia in a critically ill COVID-19 patient

    Martincic, Ziga / Skopec, Barbara / Rener, Karla / Mavric, Matej / Vovko, Tomaz / Jereb, Matjaz / Lukic, Milica

    International Journal of Infectious Diseases

    2020  Volume 99, Page(s) 269–271

    Keywords Microbiology (medical) ; Infectious Diseases ; General Medicine ; covid19
    Language English
    Publisher Elsevier BV
    Publishing country us
    Document type Article ; Online
    ZDB-ID 1331197-9
    ISSN 1878-3511 ; 1201-9712
    ISSN (online) 1878-3511
    ISSN 1201-9712
    DOI 10.1016/j.ijid.2020.08.002
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  6. Article: Severe immune thrombocytopenia in a critically ill COVID-19 patient

    Martincic, Ziga / Skopec, Barbara / Rener, Karla / Mavric, Matej / Vovko, Tomaz / Jereb, Matjaz / Lukic, Milica

    Int J Infect Dis

    Abstract: The novel coronavirus SARS-CoV-2 can cause a severe and even fatal respiratory illness named COVID-19. Apart from respiratory failure, COVID-19 may be associated with various autoimmune complications. We present a case of a critically ill patient with ... ...

    Abstract The novel coronavirus SARS-CoV-2 can cause a severe and even fatal respiratory illness named COVID-19. Apart from respiratory failure, COVID-19 may be associated with various autoimmune complications. We present a case of a critically ill patient with COVID-19 who developed severe immune thrombocytopenia that was successfully treated with a concomitant use of corticosteroids and intravenous immunoglobulins.
    Keywords covid19
    Publisher WHO
    Document type Article
    Note WHO #Covidence: #696202
    Database COVID19

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  7. Article ; Online: Novel ASAP1-USP6, FAT1-USP6, SAR1A-USP6, and TNC-USP6 fusions in primary aneurysmal bone cyst.

    Šekoranja, Daja / Zupan, Andrej / Mavčič, Blaž / Martinčič, David / Salapura, Vladka / Snoj, Žiga / Limpel Novak, Ana K / Pižem, Jože

    Genes, chromosomes & cancer

    2020  Volume 59, Issue 6, Page(s) 357–365

    Abstract: Aneurysmal bone cyst (ABC) is a benign but locally aggressive neoplasm, with a tendency for local recurrence. In contrast to other bone tumors with secondary cystic change, ABC is characterized by USP6 gene rearrangement. There is a growing list of known ...

    Abstract Aneurysmal bone cyst (ABC) is a benign but locally aggressive neoplasm, with a tendency for local recurrence. In contrast to other bone tumors with secondary cystic change, ABC is characterized by USP6 gene rearrangement. There is a growing list of known USP6 fusion partners, characterization of which has been enabled with the advent of next-generation sequencing (NGS). The list of known fusion partners includes CDH11, CNBP, COL1A1, CTNNB1, EIF1, FOSL2, OMD, PAFAH1B1, RUNX2, SEC31A, SPARC, STAT3, THRAP3, and USP9X. Using NGS, we analyzed a series of 11 consecutive ABCs and identified USP6 fusions in all cases, providing further evidence that USP6 fusions are universally present in primary ABCs. We identified four novel fusion partners in five ABCs and confirmed them by RT-PCR and Sanger sequencing, ASAP1, FAT1, SAR1A, and TNC (in two cases). Because of high sensitivity and specificity, detection of a USP6 fusion by NGS may assist in differentiating between ABC and its mimics, especially in small biopsy samples when a definite diagnosis cannot be achieved on morphological grounds alone. Further studies with a large number of cases and follow-up are needed to determine whether different fusion partners are associated with specific clinical and pathologic features of ABCs.
    MeSH term(s) Adaptor Proteins, Signal Transducing/genetics ; Adolescent ; Adult ; Aged ; Bone Cysts, Aneurysmal/genetics ; Bone Cysts, Aneurysmal/pathology ; Cadherins/genetics ; Child ; Child, Preschool ; Female ; Gene Fusion ; Humans ; Male ; Middle Aged ; Monomeric GTP-Binding Proteins/genetics ; Tenascin/genetics ; Ubiquitin Thiolesterase/genetics
    Chemical Substances ASAP1 protein, human ; Adaptor Proteins, Signal Transducing ; Cadherins ; FAT1 protein, human ; TNC protein, human ; Tenascin ; USP6 protein, human (EC 3.4.19.12) ; Ubiquitin Thiolesterase (EC 3.4.19.12) ; SAR1A protein, human (EC 3.6.1.-) ; Monomeric GTP-Binding Proteins (EC 3.6.5.2)
    Language English
    Publishing date 2020-02-08
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1018988-9
    ISSN 1098-2264 ; 1045-2257
    ISSN (online) 1098-2264
    ISSN 1045-2257
    DOI 10.1002/gcc.22836
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: FUS-NFATC2 or EWSR1-NFATC2 Fusions Are Present in a Large Proportion of Simple Bone Cysts.

    Pižem, Jože / Šekoranja, Daja / Zupan, Andrej / Boštjančič, Emanuela / Matjašič, Alenka / Mavčič, Blaž / Contreras, Juan A / Gazič, Barbara / Martinčič, David / Snoj, Žiga / Limpel Novak, Katarina A / Salapura, Vladka

    The American journal of surgical pathology

    2020  Volume 44, Issue 12, Page(s) 1623–1634

    Abstract: A simple bone cyst (SBC) is a benign bone lesion of unknown etiology. It can be differentiated from an aneurysmal bone cyst (ABC) by radiologic and histopathologic features, as well as by the absence of fusions of the USP6 gene characteristic of an ABC. ... ...

    Abstract A simple bone cyst (SBC) is a benign bone lesion of unknown etiology. It can be differentiated from an aneurysmal bone cyst (ABC) by radiologic and histopathologic features, as well as by the absence of fusions of the USP6 gene characteristic of an ABC. In an attempt to differentiate between ABC and SBC in a recurrent bone cyst, we performed targeted RNA sequencing and found an EWSR1-NFATC2 fusion and no fusion of the USP6 gene. We subsequently analyzed additional 10 cysts, consistent with SBCs after radiologic-pathologic correlation, for the presence of an NFATC2 gene fusion, by targeted RNA sequencing, reverse-transcription polymerase chain reaction (RT-PCR) and Sanger sequencing, and fluorescent in situ hybridization. Targeted RNA sequencing showed a FUS-NFATC2 fusion in 4 of 11 SBCs and an EWSR1-NFATC2 fusion in 2 of 11 SBCs. No fusion was identified in 3 SBCs and the analysis was not successful in 2 SBCs because of the low quantity or poor quality of isolated RNA. All the 6 fusions detected by targeted RNA sequencing were confirmed by RT-PCR and Sanger sequencing, and 5 of the 6 fusions by fluorescent in situ hybridization. An additional FUS-NFATC2 fusion was identified by RT-PCR, Sanger sequencing, and fluorescent in situ hybridization in 1 of the 3 cases negative for fusions by targeted RNA sequencing. At least a large subset of SBCs represents cystic neoplasms characterized by FUS-NFATC2 or EWSR1-NFATC2 fusions, which also define a group of distinct, rare "Ewing-like" sarcomas that predominantly arise in long bones. Our results provide additional evidence of the existence of benign lesions with FUS-NFATC2 or EWSR1-NFATC2 fusions. Although they can recur locally in a nondestructive manner, their clinical course and possible relation to sarcoma with EWSR1-NFATC2 or FUS-NFATC2 fusion remains to be elucidated.
    MeSH term(s) Adolescent ; Adult ; Bone Cysts/diagnostic imaging ; Bone Cysts/genetics ; Bone Cysts/pathology ; Bone Cysts, Aneurysmal/genetics ; Bone Cysts, Aneurysmal/pathology ; Child ; Diagnosis, Differential ; Female ; Gene Fusion ; Genetic Markers ; Humans ; In Situ Hybridization, Fluorescence ; Male ; NFATC Transcription Factors/genetics ; Oncogene Proteins, Fusion/genetics ; Predictive Value of Tests ; RNA-Binding Protein FUS/genetics ; Recurrence ; Reverse Transcriptase Polymerase Chain Reaction ; Sequence Analysis, RNA
    Chemical Substances FUS protein, human ; Genetic Markers ; NFATC Transcription Factors ; NFATC2 protein, human ; NFATc2-EWSR1 fusion protein, human ; Oncogene Proteins, Fusion ; RNA-Binding Protein FUS
    Language English
    Publishing date 2020-09-29
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 752964-8
    ISSN 1532-0979 ; 0147-5185
    ISSN (online) 1532-0979
    ISSN 0147-5185
    DOI 10.1097/PAS.0000000000001584
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: First report of an outbreak of pneumonia caused by Streptococcus pneumoniae serotype 6A.

    Prebil, Karla / Beović, Bojana / Paragi, Metka / Seme, Katja / Kastrin, Tamara / Plesničar, Blanka Kores / Petek, Bojana / Martinčič, Žiga

    Wiener klinische Wochenschrift

    2016  Volume 128, Issue 1-2, Page(s) 68–70

    Abstract: Five patients in a geropsychiatric unit of a psychiatric hospital became abruptly ill with pneumonia caused by Streptococcus pneumoniae serotype 6A. Four other residents were colonized with the same serotype, which has previously not been reported in ... ...

    Abstract Five patients in a geropsychiatric unit of a psychiatric hospital became abruptly ill with pneumonia caused by Streptococcus pneumoniae serotype 6A. Four other residents were colonized with the same serotype, which has previously not been reported in association with pneumonia outbreaks. Furthermore, serotype 6A is not included in all vaccine types, which may be important for the choice of vaccine in some settings. All isolates showed identical pulsed-field gel electrophoresis restriction patterns.
    MeSH term(s) Aged ; Aged, 80 and over ; Disease Outbreaks ; Female ; Humans ; Male ; Pneumonia, Pneumococcal/diagnosis ; Pneumonia, Pneumococcal/epidemiology ; Pneumonia, Pneumococcal/microbiology ; Streptococcus pneumoniae/classification ; Streptococcus pneumoniae/isolation & purification
    Language English
    Publishing date 2016-01
    Publishing country Austria
    Document type Case Reports ; Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 200462-8
    ISSN 1613-7671 ; 0043-5325 ; 0300-5178
    ISSN (online) 1613-7671
    ISSN 0043-5325 ; 0300-5178
    DOI 10.1007/s00508-015-0864-x
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article: Severe immune thrombocytopenia in a critically ill COVID-19 patient

    Martincic, Ziga

    International journal of infectious diseases, 99:269-271

    2020  

    Abstract: The novel coronavirus SARS-CoV-2 can cause a severe and even fatal respiratory illness named COVID-19. Apart from respiratory failure, COVID-19 may be associated with various autoimmune complications. We present a case of a critically ill patient with ... ...

    Abstract The novel coronavirus SARS-CoV-2 can cause a severe and even fatal respiratory illness named COVID-19. Apart from respiratory failure, COVID-19 may be associated with various autoimmune complications. We present a case of a critically ill patient with COVID-19 who developed severe immune thrombocytopenia that was successfully treated with a concomitant use of corticosteroids and intravenous immunoglobulins.
    Keywords COVID-19 ; SARS-CoV-2 ; corticosteroids ; immune thrombocytopenia ; intravenous immunoglobulins
    Language English
    Document type Article
    Database Repository for Life Sciences

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