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  1. Article ; Online: TOR complex 2 is a master regulator of plasma membrane homeostasis.

    Thorner, Jeremy

    The Biochemical journal

    2022  Volume 479, Issue 18, Page(s) 1917–1940

    Abstract: As first demonstrated in budding yeast (Saccharomyces cerevisiae), all eukaryotic cells contain two, distinct multi-component protein kinase complexes that each harbor the TOR (Target Of Rapamycin) polypeptide as the catalytic subunit. These ensembles, ... ...

    Abstract As first demonstrated in budding yeast (Saccharomyces cerevisiae), all eukaryotic cells contain two, distinct multi-component protein kinase complexes that each harbor the TOR (Target Of Rapamycin) polypeptide as the catalytic subunit. These ensembles, dubbed TORC1 and TORC2, function as universal, centrally important sensors, integrators, and controllers of eukaryotic cell growth and homeostasis. TORC1, activated on the cytosolic surface of the lysosome (or, in yeast, on the cytosolic surface of the vacuole), has emerged as a primary nutrient sensor that promotes cellular biosynthesis and suppresses autophagy. TORC2, located primarily at the plasma membrane, plays a major role in maintaining the proper levels and bilayer distribution of all plasma membrane components (sphingolipids, glycerophospholipids, sterols, and integral membrane proteins). This article surveys what we have learned about signaling via the TORC2 complex, largely through studies conducted in S. cerevisiae. In this yeast, conditions that challenge plasma membrane integrity can, depending on the nature of the stress, stimulate or inhibit TORC2, resulting in, respectively, up-regulation or down-regulation of the phosphorylation and thus the activity of its essential downstream effector the AGC family protein kinase Ypk1. Through the ensuing effect on the efficiency with which Ypk1 phosphorylates multiple substrates that control diverse processes, membrane homeostasis is maintained. Thus, the major focus here is on TORC2, Ypk1, and the multifarious targets of Ypk1 and how the functions of these substrates are regulated by their Ypk1-mediated phosphorylation, with emphasis on recent advances in our understanding of these processes.
    MeSH term(s) Cell Membrane/metabolism ; Glycerophospholipids/metabolism ; Homeostasis ; Mechanistic Target of Rapamycin Complex 1/metabolism ; Mechanistic Target of Rapamycin Complex 2/genetics ; Mechanistic Target of Rapamycin Complex 2/metabolism ; Membrane Proteins/metabolism ; Protein Kinases/metabolism ; Saccharomyces cerevisiae/metabolism ; Saccharomyces cerevisiae Proteins/metabolism ; Sphingolipids ; Sterols/metabolism
    Chemical Substances Glycerophospholipids ; Membrane Proteins ; Saccharomyces cerevisiae Proteins ; Sphingolipids ; Sterols ; Protein Kinases (EC 2.7.-) ; Mechanistic Target of Rapamycin Complex 1 (EC 2.7.11.1) ; Mechanistic Target of Rapamycin Complex 2 (EC 2.7.11.1)
    Language English
    Publishing date 2022-09-23
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 2969-5
    ISSN 1470-8728 ; 0006-2936 ; 0306-3275 ; 0264-6021
    ISSN (online) 1470-8728
    ISSN 0006-2936 ; 0306-3275 ; 0264-6021
    DOI 10.1042/BCJ20220388
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Regulation of TORC2 Function and Localization in Yeast.

    Emmerstorfer-Augustin, Anita / Thorner, Jeremy

    Annual review of cell and developmental biology

    2023  Volume 39, Page(s) 363–389

    Abstract: Every eukaryotic cell contains two distinct multisubunit protein kinase complexes that each contain a TOR (target of rapamycin) protein as the catalytic subunit. These ensembles, designated TORC1 and TORC2, serve as nutrient and stress sensors, signal ... ...

    Abstract Every eukaryotic cell contains two distinct multisubunit protein kinase complexes that each contain a TOR (target of rapamycin) protein as the catalytic subunit. These ensembles, designated TORC1 and TORC2, serve as nutrient and stress sensors, signal integrators, and regulators of cell growth and homeostasis, but they differ in their composition, localization, and function. TORC1, activated on the cytosolic surface of the vacuole (or, in mammalian cells, on the cytosolic surface of the lysosome), promotes biosynthesis and suppresses autophagy. TORC2, located primarily at the plasma membrane (PM), maintains the proper levels and bilayer distribution of all PM components (sphingolipids, glycerophospholipids, sterols, and integral membrane proteins), which are needed for the membrane expansion that accompanies cell growth and division and for combating insults to PM integrity. This review summarizes our current understanding of the assembly, structural features, subcellular distribution, and function and regulation of TORC2, obtained largely through studies conducted with
    Language English
    Publishing date 2023-06-20
    Publishing country United States
    Document type Journal Article ; Review
    ZDB-ID 1293750-2
    ISSN 1530-8995 ; 1081-0706
    ISSN (online) 1530-8995
    ISSN 1081-0706
    DOI 10.1146/annurev-cellbio-011723-030346
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article: Mitogen-activated protein kinase (MAPK) cascades-A yeast perspective.

    Bardwell, Lee / Thorner, Jeremy

    The Enzymes

    2023  Volume 54, Page(s) 137–170

    Abstract: Discovery of the class of protein kinase now dubbed a mitogen (or messenger)-activated protein kinase (MAPK) is an illustrative example of how disparate lines of investigation can converge and reveal an enzyme family universally conserved among ... ...

    Abstract Discovery of the class of protein kinase now dubbed a mitogen (or messenger)-activated protein kinase (MAPK) is an illustrative example of how disparate lines of investigation can converge and reveal an enzyme family universally conserved among eukaryotes, from single-celled microbes to humans. Moreover, elucidation of the circuitry controlling MAPK function defined a now overarching principle in enzyme regulation-the concept of an activation cascade mediated by sequential phosphorylation events. Particularly ground-breaking for this field of exploration were the contributions of genetic approaches conducted using several model organisms, but especially the budding yeast Saccharomyces cerevisiae. Notably, examination of how haploid yeast cells respond to their secreted peptide mating pheromones was crucial in pinpointing genes encoding MAPKs and their upstream activators. Fully contemporaneous biochemical analysis of the activities elicited upon stimulation of mammalian cells by insulin and other growth- and differentiation-inducing factors lead eventually to the demonstration that components homologous to those in yeast were involved. Continued studies of these pathways in yeast were integral to other foundational discoveries in MAPK signaling, including the roles of tethering, scaffolding and docking interactions.
    MeSH term(s) Animals ; Humans ; Saccharomyces cerevisiae/genetics ; Mitogen-Activated Protein Kinases/genetics ; Mitogen-Activated Protein Kinases/metabolism ; Signal Transduction ; Phosphorylation ; Protein Kinases/metabolism ; Mammals/metabolism
    Chemical Substances Mitogen-Activated Protein Kinases (EC 2.7.11.24) ; Protein Kinases (EC 2.7.-)
    Language English
    Publishing date 2023-07-28
    Publishing country United States
    Document type Journal Article
    ISSN 0423-2607
    ISSN 0423-2607
    DOI 10.1016/bs.enz.2023.07.001
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Book: Applications of chimeric genes and hybrid proteins / B

    Thorner, Jeremy

    (Methods in enzymology ; 327)

    2000  

    Author's details ed. by Jeremy Thorner
    Series title Methods in enzymology ; 327
    Applications of chimeric genes and hybrid proteins
    Collection Applications of chimeric genes and hybrid proteins
    Language English
    Size XXXVII, 672 S. : Ill., graph. Darst.
    Publisher Acad. Press
    Publishing place San Diego u.a.
    Publishing country United States
    Document type Book
    HBZ-ID HT012856945
    ISBN 0-12-182228-1 ; 978-0-12-182228-6
    Database Catalogue ZB MED Medicine, Health

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  5. Book: Applications of chimeric genes and hybrid proteins / A

    Thorner, Jeremy

    (Methods in enzymology ; 326)

    2000  

    Author's details ed. by Jeremy Thorner
    Series title Methods in enzymology ; 326
    Applications of chimeric genes and hybrid proteins
    Collection Applications of chimeric genes and hybrid proteins
    Language English
    Size XXXIII, 617 S. : Ill., graph. Darst.
    Publisher Acad. Press
    Publishing place San Diego u.a.
    Publishing country United States
    Document type Book
    HBZ-ID HT012847284
    ISBN 0-12-182227-3 ; 978-0-12-182227-9
    Database Catalogue ZB MED Medicine, Health

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  6. Book: Applications of chimeric genes and hybrid proteins / C

    Thorner, Jeremy

    (Methods in enzymology ; 328)

    2000  

    Title variant Protein-protein interactions and genomics
    Author's details ed. by Jeremy Thorner
    Series title Methods in enzymology ; 328
    Applications of chimeric genes and hybrid proteins
    Collection Applications of chimeric genes and hybrid proteins
    Language English
    Size XXXIV, 666 S. : Ill., graph. Darst.
    Publisher Acad. Press
    Publishing place San Diego u.a.
    Publishing country United States
    Document type Book
    HBZ-ID HT012853681
    ISBN 0-12-182229-X ; 978-0-12-182229-3
    Database Catalogue ZB MED Medicine, Health

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  7. Book: Applications of chimeric genes and hybrid proteins

    Thorner, Jeremy

    (Methods in enzymology ; ...)

    2000  

    Author's details ed. by Jeremy Thorner
    Series title Methods in enzymology
    ...
    Keywords Enzymologie ; Chimäre ; Gen ; Methode ; Rekombinantes Protein
    Subject Methodik ; Verfahren ; Technik ; Methoden ; Rekombinante Substanz ; Hybrid-Protein ; Rekombiniertes Protein ; Fusionsprotein ; Klinische Enzymologie ; Erbanlage ; Erbeinheit ; Erbfaktor
    Language English
    Dates of publication 2000-9999
    Publisher Acad. Press
    Publishing place San Diego u.a.
    Publishing country United States
    Document type Book
    HBZ-ID HT012847277
    Database ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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  8. Article ; Online: Editorial overview 'Network news: Reporting from the frontlines of cell signaling'.

    Ablasser, Andrea / Thorner, Jeremy

    Current opinion in cell biology

    2020  Volume 63, Page(s) iii–v

    Language English
    Publishing date 2020-04-08
    Publishing country England
    Document type Editorial
    ZDB-ID 1026381-0
    ISSN 1879-0410 ; 0955-0674
    ISSN (online) 1879-0410
    ISSN 0955-0674
    DOI 10.1016/j.ceb.2020.02.013
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Septin-associated protein kinases in the yeast Saccharomyces cerevisiae

    Jeremy THORNER

    Frontiers in Cell and Developmental Biology, Vol

    2016  Volume 4

    Abstract: Septins are a family of eukaryotic GTP-binding proteins that associate into linear rods, which, in turn, polymerize end-on-end into filaments and further assemble into other, more elaborate super-structures at discrete subcellular locations. Hence, ... ...

    Abstract Septins are a family of eukaryotic GTP-binding proteins that associate into linear rods, which, in turn, polymerize end-on-end into filaments and further assemble into other, more elaborate super-structures at discrete subcellular locations. Hence, septin-based ensembles are considered elements of the cytoskeleton. One function of these structures that has been well-documented in studies conducted in budding yeast Saccharomyces cerevisiae is to serve as a scaffold that recruits regulatory proteins, which dictate the spatial and temporal control of certain aspects of the cell division cycle. In particular, septin-associated protein kinases couple cell cycle progression with cellular morphogenesis. Thus, septin-containing structures serve as signaling platforms that integrate a multitude of signals and coordinate key downstream networks required for cell cycle passage. This review summarizes what we currently understand about how the action of septin-associated protein kinases and their substrates control information flow to drive the cell cycle into and out of mitosis, to regulate bud growth, and especially to direct timely and efficient execution of cytokinesis and cell abscission. Thus, septin structures represent a regulatory node at the intersection of many signaling pathways. In addition, and importantly, the activities of certain septin-associated protein kinases also regulate the state of organization of the septins themselves, creating a complex feedback loop.
    Keywords Cell cycle ; cell signaling ; cytoskeletal element ; morphology ; protein phosphorylation ; Biology (General) ; QH301-705.5
    Subject code 571 ; 612
    Language English
    Publishing date 2016-11-01T00:00:00Z
    Publisher Frontiers Media S.A.
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  10. Article ; Online: Cdc42-Specific GTPase-Activating Protein Rga1 Squelches Crosstalk between the High-Osmolarity Glycerol (HOG) and Mating Pheromone Response MAPK Pathways.

    Patterson, Jesse C / Goupil, Louise S / Thorner, Jeremy

    Biomolecules

    2021  Volume 11, Issue 10

    Abstract: Eukaryotes utilize distinct mitogen/messenger-activated protein kinase (MAPK) pathways to evoke appropriate responses when confronted with different stimuli. In yeast, hyperosmotic stress activates MAPK Hog1, whereas mating pheromones activate MAPK Fus3 ( ...

    Abstract Eukaryotes utilize distinct mitogen/messenger-activated protein kinase (MAPK) pathways to evoke appropriate responses when confronted with different stimuli. In yeast, hyperosmotic stress activates MAPK Hog1, whereas mating pheromones activate MAPK Fus3 (and MAPK Kss1). Because these pathways share several upstream components, including the small guanosine-5'-triphosphate phosphohydrolase (GTPase) cell-division-cycle-42 (Cdc42), mechanisms must exist to prevent inadvertent cross-pathway activation. Hog1 activity is required to prevent crosstalk to Fus3 and Kss1. To identify other factors required to maintain signaling fidelity during hypertonic stress, we devised an unbiased genetic selection for mutants unable to prevent such crosstalk even when active Hog1 is present. We repeatedly isolated truncated alleles of
    MeSH term(s) CDC28 Protein Kinase, S cerevisiae/genetics ; Catalytic Domain/genetics ; GTPase-Activating Proteins/genetics ; Gene Expression Regulation, Fungal/genetics ; Genes, Mating Type, Fungal/genetics ; Mitogen-Activated Protein Kinases/genetics ; Pheromones/genetics ; Phosphoprotein Phosphatases/genetics ; Phosphorylation/genetics ; Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae Proteins/genetics ; Signal Transduction/genetics ; cdc42 GTP-Binding Protein/genetics
    Chemical Substances GTPase-Activating Proteins ; Pheromones ; Rga1 protein, S cerevisiae ; Saccharomyces cerevisiae Proteins ; CDC28 Protein Kinase, S cerevisiae (EC 2.7.11.22) ; FUS3 protein, S cerevisiae (EC 2.7.11.24) ; HOG1 protein, S cerevisiae (EC 2.7.11.24) ; KSS1 protein, S cerevisiae (EC 2.7.11.24) ; Mitogen-Activated Protein Kinases (EC 2.7.11.24) ; Phosphoprotein Phosphatases (EC 3.1.3.16) ; cdc42 GTP-Binding Protein (EC 3.6.5.2)
    Language English
    Publishing date 2021-10-17
    Publishing country Switzerland
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 2701262-1
    ISSN 2218-273X ; 2218-273X
    ISSN (online) 2218-273X
    ISSN 2218-273X
    DOI 10.3390/biom11101530
    Database MEDical Literature Analysis and Retrieval System OnLINE

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