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  1. Article ; Online: Evolutionary dependence of host type and chasmothecial appendage morphology in obligate plant parasites belonging to Erysipheae (powdery mildew, Erysiphaceae).

    Shirouzu, Takashi / Suzuki, Takao K / Matsuoka, Shunsuke / Takamatsu, Susumu

    Mycologia

    2024  , Page(s) 1–11

    Abstract: Evolutionary relationships between the morphological and ecological traits of fungi are poorly understood. The appendages of chasmothecia, which are sexual reproductive organs of Erysiphaceae, are considered to play a crucial role in the overwintering ... ...

    Abstract Evolutionary relationships between the morphological and ecological traits of fungi are poorly understood. The appendages of chasmothecia, which are sexual reproductive organs of Erysiphaceae, are considered to play a crucial role in the overwintering strategies of these fungi on host plants. Previous studies suggested that both the host type and appendage morphology evolved at the same nodes and transitioned from complex appendages on deciduous hosts to simple appendages on herb/evergreen hosts. However, the evolutionary dependence between host type and appendage morphology remains unproven owing to the limited species data used in analyses. To elucidate the evolutionary relationship between host type and appendage morphology, we used phylogenetic comparative methods (PCMs) to investigate the state transition, ancestral state, evolutionary dependence, and contingent evolution within Erysipheae, the largest and most diverse tribe in Erysiphaceae. Our PCMs, based on a comprehensive data set of Erysipheae, revealed that the most ancestral states were deciduous host types and complex appendages. From these ancestral states, convergent evolution toward the herb/evergreen host types and simple appendages occurred multiple times at the same nodes. For the first time in Erysiphaceae, we detected an evolutionary dependence between host type and appendage morphology. This is one of the few examples in which evolutionary dependence between host phenology and morphological traits in plant-parasitic fungi was demonstrated using PCMs. Appendage simplification on herb/evergreen hosts and complications on deciduous hosts can be reasonably explained by the functional advantages of each appendage type in different overwintering strategies. These expected appendage functions can explain approximately 90% of host type and appendage morphology combinations observed in the analyzed taxa. However, our results also highlighted the occurrence of evolutionary shifts that deviate from the expected advantages of each appendage morphology. These seemingly irrational shifts might be interpretable from the flexibility of overwintering strategies and quantification of appendage functions.
    Language English
    Publishing date 2024-04-12
    Publishing country England
    Document type Journal Article
    ZDB-ID 281335-x
    ISSN 1557-2536 ; 0027-5514
    ISSN (online) 1557-2536
    ISSN 0027-5514
    DOI 10.1080/00275514.2024.2327972
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Two new records of powdery mildews (

    Meeboon, Jamjan / Okamoto, Jun / Takamatsu, Susumu

    Mycoscience

    2021  Volume 62, Issue 3, Page(s) 198–204

    Abstract: ... Erysiphe ... ...

    Abstract Erysiphe actinidiicola
    Language English
    Publishing date 2021-05-20
    Publishing country Japan
    Document type Journal Article
    ZDB-ID 1285813-4
    ISSN 1618-2545 ; 1340-3540
    ISSN (online) 1618-2545
    ISSN 1340-3540
    DOI 10.47371/mycosci.2021.02.002
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Morphophylogenetic analyses revealed that

    Meeboon, Jamjan / Takamatsu, Susumu / Braun, Uwe

    Mycologia

    2020  Volume 112, Issue 2, Page(s) 244–266

    Abstract: Podosphaera ... ...

    Abstract Podosphaera tridactyla
    MeSH term(s) Ascomycota/classification ; Ascomycota/genetics ; Ascomycota/isolation & purification ; DNA, Ribosomal ; DNA, Ribosomal Spacer ; Genes, Fungal ; Phylogeny ; Plant Diseases/microbiology ; Prunus/microbiology
    Chemical Substances DNA, Ribosomal ; DNA, Ribosomal Spacer
    Language English
    Publishing date 2020-02-24
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 281335-x
    ISSN 1557-2536 ; 0027-5514
    ISSN (online) 1557-2536
    ISSN 0027-5514
    DOI 10.1080/00275514.2019.1698924
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Phylogeny and taxonomy of

    Yamaguchi, Yusuke / Meeboon, Jamjan / P Heluta, Vasyl / Liu, Shu-Yan / Feng, Jing / Takamatsu, Susumu

    Mycoscience

    2021  Volume 62, Issue 2, Page(s) 115–123

    Abstract: ... The ... ...

    Abstract The genus
    Language English
    Publishing date 2021-03-20
    Publishing country Japan
    Document type Journal Article
    ZDB-ID 1285813-4
    ISSN 1618-2545 ; 1340-3540
    ISSN (online) 1618-2545
    ISSN 1340-3540
    DOI 10.47371/mycosci.2020.11.009
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: Phylogeny and taxonomy of

    Maeda, Mayu / Meeboon, Jamjan / Heluta, Vasyl P / Liu, Shu-Yan / Tang, Shu Rong / Takamatsu, Susumu

    Mycoscience

    2021  Volume 62, Issue 4, Page(s) 268–280

    Abstract: ... The ... ...

    Abstract The genus
    Language English
    Publishing date 2021-07-20
    Publishing country Japan
    Document type Journal Article
    ZDB-ID 1285813-4
    ISSN 1618-2545 ; 1340-3540
    ISSN (online) 1618-2545
    ISSN 1340-3540
    DOI 10.47371/mycosci.2021.04.001
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Structural and biochemical characterizations of Thermus thermophilus HB8 transketolase producing a heptulose

    Yoshihara, Akihide / Takamatsu, Yota / Mochizuki, Susumu / Yoshida, Hiromi / Masui, Ryoji / Izumori, Ken / Kamitori, Shigehiro

    Appl Microbiol Biotechnol. 2023 Jan., v. 107, no. 1 p.233-245

    2023  

    Abstract: Transketolase is a key enzyme in the pentose phosphate pathway in all organisms, recognizing sugar phosphates as substrates. Transketolase with a cofactor of thiamine pyrophosphate catalyzes the transfer of a 2-carbon unit from D-xylulose-5-phosphate to ... ...

    Abstract Transketolase is a key enzyme in the pentose phosphate pathway in all organisms, recognizing sugar phosphates as substrates. Transketolase with a cofactor of thiamine pyrophosphate catalyzes the transfer of a 2-carbon unit from D-xylulose-5-phosphate to D-ribose-5-phosphate (5-carbon aldose), giving D-sedoheptulose-7-phosphate (7-carbon ketose). Transketolases can also recognize non-phosphorylated monosaccharides as substrates, and catalyze the formation of non-phosphorylated 7-carbon ketose (heptulose), which has attracted pharmaceutical attention as an inhibitor of sugar metabolism. Here, we report the structural and biochemical characterizations of transketolase from Thermus thermophilus HB8 (TtTK), a well-characterized thermophilic Gram-negative bacterium. TtTK showed marked thermostability with maximum enzyme activity at 85 °C, and efficiently catalyzed the formation of heptuloses from lithium hydroxypyruvate and four aldopentoses: D-ribose, L-lyxose, L-arabinose, and D-xylose. The X-ray structure showed that TtTK tightly forms a homodimer with more interactions between subunits compared with transketolase from other organisms, contributing to its thermal stability. A modeling study based on X-ray structures suggested that D-ribose and L-lyxose could bind to the catalytic site of TtTK to form favorable hydrogen bonds with the enzyme, explaining the high conversion rates of 41% (D-ribose) and 43% (L-lyxose) to heptulose. These results demonstrate the potential of TtTK as an enzyme producing a rare sugar of heptulose. KEY POINTS: • Transketolase catalyzes the formation of a 7-carbon sugar phosphate • Structural and biochemical characterizations of thermophilic transketolase were done • The enzyme could produce non-phosphorylated 7-carbon ketoses from sugars
    Keywords Gram-negative bacteria ; Thermus thermophilus ; X-radiation ; active sites ; arabinose ; enzyme activity ; hydrogen ; ketoses ; lithium ; metabolism ; pentose phosphate cycle ; phosphates ; thermal stability ; thiamin ; transketolase ; xylose
    Language English
    Dates of publication 2023-01
    Size p. 233-245.
    Publishing place Springer Berlin Heidelberg
    Document type Article ; Online
    ZDB-ID 392453-1
    ISSN 1432-0614 ; 0171-1741 ; 0175-7598
    ISSN (online) 1432-0614
    ISSN 0171-1741 ; 0175-7598
    DOI 10.1007/s00253-022-12297-z
    Database NAL-Catalogue (AGRICOLA)

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  7. Article: Beyond Nuclear Ribosomal DNA Sequences: Evolution, Taxonomy, and Closest Known Saprobic Relatives of Powdery Mildew Fungi (

    Vaghefi, Niloofar / Kusch, Stefan / Németh, Márk Z / Seress, Diána / Braun, Uwe / Takamatsu, Susumu / Panstruga, Ralph / Kiss, Levente

    Frontiers in microbiology

    2022  Volume 13, Page(s) 903024

    Abstract: Powdery mildew fungi ( ...

    Abstract Powdery mildew fungi (
    Language English
    Publishing date 2022-06-09
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2587354-4
    ISSN 1664-302X
    ISSN 1664-302X
    DOI 10.3389/fmicb.2022.903024
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article: Hosts of asexual morph of Erysiphe quercicola from Thailand

    Meeboon, Jamjan / Takamatsu, Susumu

    Tropical plant pathology. 2020 Apr., v. 45, no. 2

    2020  

    Abstract: Between 2002 and 2017, asexual morphs of powdery mildews (Erysiphales) were collected in Thailand from the following hosts: Cassia fistula, Castanopsis argyrophylla, Durio zibethinus, Jatropha curcas, Kydia calycina, Hevea brasiliensis, Hodgsonia ... ...

    Abstract Between 2002 and 2017, asexual morphs of powdery mildews (Erysiphales) were collected in Thailand from the following hosts: Cassia fistula, Castanopsis argyrophylla, Durio zibethinus, Jatropha curcas, Kydia calycina, Hevea brasiliensis, Hodgsonia macrocarpa, Mallotus philippinensis, Mimosa pudica, Nephelium lappaceum, Tamarindus indica and Ziziphus jujuba. Combined molecular and morphological analyses revealed that all these specimens belong to Erysiphe quercicola. Sequences retrieved from these powdery mildews are nested within the E. quercicola clade. These results show that Erysiphe quercicola may form its asexual morph on a very broad range of hosts belonging to various plant families, particularly in the tropics, in contrast to its sexual morph which is confined to oak species (Quercus, Fagaceae). Cassia fistula, Castanopsis argyrophylla, J. curcas, K. calycina, H. macrocarpa, M. philippinensis, M. pudica, T. indica and Z. jujuba are new host records for E. quercicola worldwide.
    Keywords Cassia fistula ; Castanopsis ; Durio zibethinus ; Erysiphe ; Hevea brasiliensis ; Hodgsonia macrocarpa ; Jatropha curcas ; Mallotus philippensis ; Mimosa pudica ; Nephelium lappaceum ; Quercus ; Tamarindus indica ; Ziziphus jujuba ; anamorphs ; hosts ; new host records ; powdery mildew ; tropics ; Thailand
    Language English
    Dates of publication 2020-04
    Size p. 122-135.
    Publishing place Springer International Publishing
    Document type Article
    ZDB-ID 2519866-X
    ISSN 1983-2052 ; 1982-5676
    ISSN (online) 1983-2052
    ISSN 1982-5676
    DOI 10.1007/s40858-019-00326-8
    Database NAL-Catalogue (AGRICOLA)

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  9. Article ; Online: Evolutionary patterns of host type and chasmothecial appendage morphology in obligate plant parasites belonging to Cystotheceae (powdery mildew, Erysiphaceae).

    Shirouzu, Takashi / Suzuki, Takao K / Matsuoka, Shunsuke / Takamatsu, Susumu

    Mycologia

    2021  Volume 114, Issue 1, Page(s) 35–45

    Abstract: The chasmothecial appendages of Erysiphaceae are considered to function in the overwintering strategy and evolve morphologically in line with transitions of different host type. However, the evolutionary patterns and relationships of these traits have ... ...

    Abstract The chasmothecial appendages of Erysiphaceae are considered to function in the overwintering strategy and evolve morphologically in line with transitions of different host type. However, the evolutionary patterns and relationships of these traits have not yet been verified using statistical models based on phylogenetic information. We aimed to clarify the evolutionary process of host type and appendage morphology in Cystotheceae using phylogenetic comparative methods (PCMs) and to evaluate the evolutionary relationship of these traits. The ancestral state estimation of host types showed that the deciduous type is the most ancestral in Cystotheceae, and the herb or evergreen types evolved secondarily four times and twice, respectively. Branched- or circinate-type appendages were estimated to be the most ancestral, and the mycelioid and rudimentary types evolved secondarily thrice and once, respectively. The results of the random forest analysis showed that the host type was predictable from the phylogeny and appendage morphology. The ancestral state estimation suggested that simultaneous transitions of the host type and appendage morphology occurred at several ancestral nodes. These results suggest some functional relationships between host type and appendage morphology, but there was no statistical support for an overall trend in evolutionary dependence between these traits. Our results demonstrate the utility of PCMs in the study of trait evolution in Cystotheceae, which can be applied to a broader phylogeny of powdery mildews to elucidate the evolutionary relationship and functional causality of phenotypic traits.
    MeSH term(s) Animals ; Ascomycota/genetics ; Erysiphe ; Parasites ; Phylogeny ; Plant Diseases ; Plants
    Language English
    Publishing date 2021-12-06
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 281335-x
    ISSN 1557-2536 ; 0027-5514
    ISSN (online) 1557-2536
    ISSN 0027-5514
    DOI 10.1080/00275514.2021.1983352
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Structural and biochemical characterizations of Thermus thermophilus HB8 transketolase producing a heptulose.

    Yoshihara, Akihide / Takamatsu, Yota / Mochizuki, Susumu / Yoshida, Hiromi / Masui, Ryoji / Izumori, Ken / Kamitori, Shigehiro

    Applied microbiology and biotechnology

    2022  

    Abstract: Transketolase is a key enzyme in the pentose phosphate pathway in all organisms, recognizing sugar phosphates as substrates. Transketolase with a cofactor of thiamine pyrophosphate catalyzes the transfer of a 2-carbon unit from D-xylulose-5-phosphate to ... ...

    Abstract Transketolase is a key enzyme in the pentose phosphate pathway in all organisms, recognizing sugar phosphates as substrates. Transketolase with a cofactor of thiamine pyrophosphate catalyzes the transfer of a 2-carbon unit from D-xylulose-5-phosphate to D-ribose-5-phosphate (5-carbon aldose), giving D-sedoheptulose-7-phosphate (7-carbon ketose). Transketolases can also recognize non-phosphorylated monosaccharides as substrates, and catalyze the formation of non-phosphorylated 7-carbon ketose (heptulose), which has attracted pharmaceutical attention as an inhibitor of sugar metabolism. Here, we report the structural and biochemical characterizations of transketolase from Thermus thermophilus HB8 (TtTK), a well-characterized thermophilic Gram-negative bacterium. TtTK showed marked thermostability with maximum enzyme activity at 85 °C, and efficiently catalyzed the formation of heptuloses from lithium hydroxypyruvate and four aldopentoses: D-ribose, L-lyxose, L-arabinose, and D-xylose. The X-ray structure showed that TtTK tightly forms a homodimer with more interactions between subunits compared with transketolase from other organisms, contributing to its thermal stability. A modeling study based on X-ray structures suggested that D-ribose and L-lyxose could bind to the catalytic site of TtTK to form favorable hydrogen bonds with the enzyme, explaining the high conversion rates of 41% (D-ribose) and 43% (L-lyxose) to heptulose. These results demonstrate the potential of TtTK as an enzyme producing a rare sugar of heptulose. KEY POINTS: • Transketolase catalyzes the formation of a 7-carbon sugar phosphate • Structural and biochemical characterizations of thermophilic transketolase were done • The enzyme could produce non-phosphorylated 7-carbon ketoses from sugars.
    Language English
    Publishing date 2022-11-28
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 392453-1
    ISSN 1432-0614 ; 0171-1741 ; 0175-7598
    ISSN (online) 1432-0614
    ISSN 0171-1741 ; 0175-7598
    DOI 10.1007/s00253-022-12297-z
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

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