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  1. Article ; Online: SARS-COV-2 viroporins activate the NLRP3-inflammasome by the mitochondrial permeability transition pore.

    Guarnieri, Joseph W / Angelin, Alessia / Murdock, Deborah G / Schaefer, Patrick / Portluri, Prasanth / Lie, Timothy / Huang, Jessica / Wallace, Douglas C

    Frontiers in immunology

    2023  Volume 14, Page(s) 1064293

    Abstract: Background: Compared to healthy controls, severe COVID19 patients display increased levels of activated NLRP3-inflammasome (NLRP3-I) and interleukin (IL)-1β. SARS-CoV-2 encodes viroporin proteins E and Orf3a(2-E+2-3a) with homologs to SARS-CoV-1, 1-E+1- ... ...

    Abstract Background: Compared to healthy controls, severe COVID19 patients display increased levels of activated NLRP3-inflammasome (NLRP3-I) and interleukin (IL)-1β. SARS-CoV-2 encodes viroporin proteins E and Orf3a(2-E+2-3a) with homologs to SARS-CoV-1, 1-E+1-3a, which elevate NLRP3-I activation; by an unknown mechanism. Thus, we investigated how 2-E+2-3a activates the NLRP3-I to better understand the pathophysiology of severe COVID-19.
    Methods: We generated a polycistronic expression-vector co-expressing 2-E+2-3a from a single transcript. To elucidate how 2-E+2-3a activates the NLRP3-I, we reconstituted the NLRP3-I in 293T cells and used THP1-derived macrophages to monitor the secretion of mature IL-1β. Mitochondrial physiology was assessed using fluorescent microscopy and plate reader assays, and the release of mitochondrial DNA (mtDNA) was detected from cytosolic-enriched fractions using Real-Time PCR.
    Results: Expression of 2-E+2-3a in 293T cells increased cytosolic Ca++ and elevated mitochondrial Ca++, taken up through the MCUi11-sensitive mitochondrial calcium uniporter. Increased mitochondrial Ca++ stimulated NADH, mitochondrial reactive oxygen species (mROS) production and the release of mtDNA into the cytosol. Expression of 2-E+2-3a in NLRP3-I reconstituted 293T cells and THP1-derived macrophages displayed increased secretion of IL-1β. Increasing mitochondrial antioxidant defenses via treatment with MnTBAP or genetic expression of mCAT abolished 2-E+2-3a elevation of mROS, cytosolic mtDNA levels, and secretion of NLRP3-activated-IL-1β. The 2-E+2-3a-induced release of mtDNA and the secretion of NLRP3-activated-IL-1β were absent in cells lacking mtDNA and blocked in cells treated with the mitochondrial-permeability-pore(mtPTP)-specific inhibitor NIM811.
    Conclusion: Our findings revealed that mROS activates the release of mitochondrial DNA via the NIM811-sensitive mitochondrial-permeability-pore(mtPTP), activating the inflammasome. Hence, interventions targeting mROS and the mtPTP may mitigate the severity of COVID-19 cytokine storms.
    MeSH term(s) Humans ; Inflammasomes/genetics ; Inflammasomes/metabolism ; NLR Family, Pyrin Domain-Containing 3 Protein/genetics ; NLR Family, Pyrin Domain-Containing 3 Protein/metabolism ; Viroporin Proteins ; SARS-CoV-2/genetics ; Mitochondrial Permeability Transition Pore ; COVID-19 ; DNA, Mitochondrial/metabolism
    Chemical Substances Inflammasomes ; NLR Family, Pyrin Domain-Containing 3 Protein ; Viroporin Proteins ; Mitochondrial Permeability Transition Pore ; DNA, Mitochondrial
    Language English
    Publishing date 2023-02-20
    Publishing country Switzerland
    Document type Journal Article ; Research Support, U.S. Gov't, Non-P.H.S.
    ZDB-ID 2606827-8
    ISSN 1664-3224 ; 1664-3224
    ISSN (online) 1664-3224
    ISSN 1664-3224
    DOI 10.3389/fimmu.2023.1064293
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: SARS-CoV-2 Mitochondrial Metabolic and Epigenomic Reprogramming in COVID-19.

    Guarnieri, Joseph W / Haltom, Jeffrey A / Albrecht, Yentli E Soto / Lie, Timothy / Olali, Arnold Z / Widjaja, Gabrielle A / Ranshing, Sujata S / Angelin, Alessia / Murdock, Deborah / Wallace, Douglas C

    Pharmacological research

    2024  , Page(s) 107170

    Abstract: To determine the effects of SARS-CoV-2 infection on cellular metabolism, we conducted an exhaustive survey of the cellular metabolic pathways modulated by SARS-CoV-2 infection and confirmed their importance for SARS-CoV-2 propagation by cataloging the ... ...

    Abstract To determine the effects of SARS-CoV-2 infection on cellular metabolism, we conducted an exhaustive survey of the cellular metabolic pathways modulated by SARS-CoV-2 infection and confirmed their importance for SARS-CoV-2 propagation by cataloging the effects of specific pathway inhibitors. This revealed that SARS-CoV-2 strongly inhibits mitochondrial oxidative phosphorylation (OXPHOS) resulting in increased mitochondrial reactive oxygen species (mROS) production. The elevated mROS stabilizes HIF-1α which redirects carbon molecules from mitochondrial oxidation through glycolysis and the pentose phosphate pathway (PPP) to provide substrates for viral biogenesis. mROS also induces the release of mitochondrial DNA (mtDNA) which activates innate immunity. The restructuring of cellular energy metabolism is mediated in part by SARS-CoV-2 Orf8 and Orf10 whose expression restructures nuclear DNA (nDNA) and mtDNA OXPHOS gene expression. These viral proteins likely alter the epigenome, either by directly altering histone modifications or by modulating mitochondrial metabolite substrates of epigenome modification enzymes, potentially silencing OXPHOS gene expression and contributing to long-COVID.
    Language English
    Publishing date 2024-04-11
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 1003347-6
    ISSN 1096-1186 ; 0031-6989 ; 1043-6618
    ISSN (online) 1096-1186
    ISSN 0031-6989 ; 1043-6618
    DOI 10.1016/j.phrs.2024.107170
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: SARS-CoV-2 Viroporins Activate The NLRP3-Inflammasome Via The Mitochondrial Permeability Transition Pore

    Guarnieri, Joseph W / Angelin, Alessia / Murdoch, Deborah G / Portluri, Prasanth / Lie, Timothy / Wallace, Douglas C.

    bioRxiv

    Abstract: Cytokine storm precipitated by activation of the host innate immune defenses is a major cause of COVID19 death. To elucidate how SARS-CoV-2 initiates this inflammatory process, we studied viroporin proteins E and Orf3a (2-E+2-3a). Expression of 2-E+2-3a ... ...

    Abstract Cytokine storm precipitated by activation of the host innate immune defenses is a major cause of COVID19 death. To elucidate how SARS-CoV-2 initiates this inflammatory process, we studied viroporin proteins E and Orf3a (2-E+2-3a). Expression of 2-E+2-3a in human 293T cells resulted in increased cytosolic Ca++ and then elevated mitochondrial Ca++, taken up through the MUCi11-sensitive mitochondrial calcium uniporter (MCU). Increased mitochondrial Ca++ resulted in stimulation of mitochondrial reactive oxygen species (mROS) production, which was blocked by mitochondrially-targeted catalase or MnTBAP. To determined how mROS activates the inflammasome, we transformed 293T cells with NLRP3, ASC, pro-caspase-1 and pro-IL-1β plus used THP1 derived macrophages to monitor the secretion of mature IL-1β. This revealed that mROS activates a factor that is released via the NIM811-sensitive mitochondrial permeability pore (mtPTP) to activate the inflammasome. Hence, interventions targeting mROS and the mtPTP may mitigate the severity of COVID19 cytokine storms.
    Keywords covid19
    Language English
    Publishing date 2022-02-22
    Publisher Cold Spring Harbor Laboratory
    Document type Article ; Online
    DOI 10.1101/2022.02.19.481139
    Database COVID19

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  4. Article ; Online: A comprehensive SARS-CoV-2 and COVID-19 review, Part 1: Intracellular overdrive for SARS-CoV-2 infection.

    Jamison, David A / Anand Narayanan, S / Trovão, Nídia S / Guarnieri, Joseph W / Topper, Michael J / Moraes-Vieira, Pedro M / Zaksas, Viktorija / Singh, Keshav K / Wurtele, Eve Syrkin / Beheshti, Afshin

    European journal of human genetics : EJHG

    2022  Volume 30, Issue 8, Page(s) 889–898

    Abstract: COVID-19, the disease caused by SARS-CoV-2, has claimed approximately 5 million lives and 257 million cases reported globally. This virus and disease have significantly affected people worldwide, whether directly and/or indirectly, with a virulent ... ...

    Abstract COVID-19, the disease caused by SARS-CoV-2, has claimed approximately 5 million lives and 257 million cases reported globally. This virus and disease have significantly affected people worldwide, whether directly and/or indirectly, with a virulent pathogen that continues to evolve as we race to learn how to prevent, control, or cure COVID-19. The focus of this review is on the SARS-CoV-2 virus' mechanism of infection and its proclivity at adapting and restructuring the intracellular environment to support viral replication. We highlight current knowledge and how scientific communities with expertize in viral, cellular, and clinical biology have contributed to increase our understanding of SARS-CoV-2, and how these findings may help explain the widely varied clinical observations of COVID-19 patients.
    MeSH term(s) COVID-19 ; Humans ; SARS-CoV-2 ; Virus Replication
    Language English
    Publishing date 2022-05-16
    Publishing country England
    Document type Journal Article ; Review ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S.
    ZDB-ID 1141470-4
    ISSN 1476-5438 ; 1018-4813
    ISSN (online) 1476-5438
    ISSN 1018-4813
    DOI 10.1038/s41431-022-01108-8
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: A comprehensive SARS-CoV-2 and COVID-19 review, Part 2: host extracellular to systemic effects of SARS-CoV-2 infection.

    Narayanan, S Anand / Jamison, David A / Guarnieri, Joseph W / Zaksas, Victoria / Topper, Michael / Koutnik, Andrew P / Park, Jiwoon / Clark, Kevin B / Enguita, Francisco J / Leitão, Ana Lúcia / Das, Saswati / Moraes-Vieira, Pedro M / Galeano, Diego / Mason, Christopher E / Trovão, Nídia S / Schwartz, Robert E / Schisler, Jonathan C / Coelho-Dos-Reis, Jordana G A / Wurtele, Eve Syrkin /
    Beheshti, Afshin

    European journal of human genetics : EJHG

    2023  Volume 32, Issue 1, Page(s) 10–20

    Abstract: COVID-19, the disease caused by SARS-CoV-2, has caused significant morbidity and mortality worldwide. The betacoronavirus continues to evolve with global health implications as we race to learn more to curb its transmission, evolution, and sequelae. The ... ...

    Abstract COVID-19, the disease caused by SARS-CoV-2, has caused significant morbidity and mortality worldwide. The betacoronavirus continues to evolve with global health implications as we race to learn more to curb its transmission, evolution, and sequelae. The focus of this review, the second of a three-part series, is on the biological effects of the SARS-CoV-2 virus on post-acute disease in the context of tissue and organ adaptations and damage. We highlight the current knowledge and describe how virological, animal, and clinical studies have shed light on the mechanisms driving the varied clinical diagnoses and observations of COVID-19 patients. Moreover, we describe how investigations into SARS-CoV-2 effects have informed the understanding of viral pathogenesis and provide innovative pathways for future research on the mechanisms of viral diseases.
    MeSH term(s) Animals ; Humans ; COVID-19 ; SARS-CoV-2
    Language English
    Publishing date 2023-11-08
    Publishing country England
    Document type Journal Article ; Review
    ZDB-ID 1141470-4
    ISSN 1476-5438 ; 1018-4813
    ISSN (online) 1476-5438
    ISSN 1018-4813
    DOI 10.1038/s41431-023-01462-1
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Core mitochondrial genes are down-regulated during SARS-CoV-2 infection of rodent and human hosts.

    Guarnieri, Joseph W / Dybas, Joseph M / Fazelinia, Hossein / Kim, Man S / Frere, Justin / Zhang, Yuanchao / Soto Albrecht, Yentli / Murdock, Deborah G / Angelin, Alessia / Singh, Larry N / Weiss, Scott L / Best, Sonja M / Lott, Marie T / Zhang, Shiping / Cope, Henry / Zaksas, Victoria / Saravia-Butler, Amanda / Meydan, Cem / Foox, Jonathan /
    Mozsary, Christopher / Bram, Yaron / Kidane, Yared / Priebe, Waldemar / Emmett, Mark R / Meller, Robert / Demharter, Sam / Stentoft-Hansen, Valdemar / Salvatore, Marco / Galeano, Diego / Enguita, Francisco J / Grabham, Peter / Trovao, Nidia S / Singh, Urminder / Haltom, Jeffrey / Heise, Mark T / Moorman, Nathaniel J / Baxter, Victoria K / Madden, Emily A / Taft-Benz, Sharon A / Anderson, Elizabeth J / Sanders, Wes A / Dickmander, Rebekah J / Baylin, Stephen B / Wurtele, Eve Syrkin / Moraes-Vieira, Pedro M / Taylor, Deanne / Mason, Christopher E / Schisler, Jonathan C / Schwartz, Robert E / Beheshti, Afshin / Wallace, Douglas C

    Science translational medicine

    2023  Volume 15, Issue 708, Page(s) eabq1533

    Abstract: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) viral proteins bind to host mitochondrial proteins, likely inhibiting oxidative phosphorylation (OXPHOS) and stimulating glycolysis. We analyzed mitochondrial gene expression in nasopharyngeal ... ...

    Abstract Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) viral proteins bind to host mitochondrial proteins, likely inhibiting oxidative phosphorylation (OXPHOS) and stimulating glycolysis. We analyzed mitochondrial gene expression in nasopharyngeal and autopsy tissues from patients with coronavirus disease 2019 (COVID-19). In nasopharyngeal samples with declining viral titers, the virus blocked the transcription of a subset of nuclear DNA (nDNA)-encoded mitochondrial OXPHOS genes, induced the expression of microRNA 2392, activated HIF-1α to induce glycolysis, and activated host immune defenses including the integrated stress response. In autopsy tissues from patients with COVID-19, SARS-CoV-2 was no longer present, and mitochondrial gene transcription had recovered in the lungs. However, nDNA mitochondrial gene expression remained suppressed in autopsy tissue from the heart and, to a lesser extent, kidney, and liver, whereas mitochondrial DNA transcription was induced and host-immune defense pathways were activated. During early SARS-CoV-2 infection of hamsters with peak lung viral load, mitochondrial gene expression in the lung was minimally perturbed but was down-regulated in the cerebellum and up-regulated in the striatum even though no SARS-CoV-2 was detected in the brain. During the mid-phase SARS-CoV-2 infection of mice, mitochondrial gene expression was starting to recover in mouse lungs. These data suggest that when the viral titer first peaks, there is a systemic host response followed by viral suppression of mitochondrial gene transcription and induction of glycolysis leading to the deployment of antiviral immune defenses. Even when the virus was cleared and lung mitochondrial function had recovered, mitochondrial function in the heart, kidney, liver, and lymph nodes remained impaired, potentially leading to severe COVID-19 pathology.
    MeSH term(s) Cricetinae ; Humans ; Animals ; Mice ; COVID-19/pathology ; SARS-CoV-2 ; Rodentia ; Genes, Mitochondrial ; Lung/pathology
    Language English
    Publishing date 2023-08-09
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Intramural ; Research Support, U.S. Gov't, Non-P.H.S. ; Research Support, Non-U.S. Gov't
    ZDB-ID 2518854-9
    ISSN 1946-6242 ; 1946-6234
    ISSN (online) 1946-6242
    ISSN 1946-6234
    DOI 10.1126/scitranslmed.abq1533
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: TARGETED DOWN REGULATION OF CORE MITOCHONDRIAL GENES DURING SARS-COV-2 INFECTION.

    Guarnieri, Joseph W / Dybas, Joseph M / Fazelinia, Hossein / Kim, Man S / Frere, Justin / Zhang, Yuanchao / Albrecht, Yentli Soto / Murdock, Deborah G / Angelin, Alessia / Singh, Larry N / Weiss, Scott L / Best, Sonja M / Lott, Marie T / Cope, Henry / Zaksas, Viktorija / Saravia-Butler, Amanda / Meydan, Cem / Foox, Jonathan / Mozsary, Christopher /
    Kidane, Yared H / Priebe, Waldemar / Emmett, Mark R / Meller, Robert / Singh, Urminder / Bram, Yaron / tenOever, Benjamin R / Heise, Mark T / Moorman, Nathaniel J / Madden, Emily A / Taft-Benz, Sharon A / Anderson, Elizabeth J / Sanders, Wes A / Dickmander, Rebekah J / Baxter, Victoria K / Baylin, Stephen B / Wurtele, Eve Syrkin / Moraes-Vieira, Pedro M / Taylor, Deanne / Mason, Christopher E / Schisler, Jonathan C / Schwartz, Robert E / Beheshti, Afshin / Wallace, Douglas C

    bioRxiv : the preprint server for biology

    2022  

    Abstract: Defects in mitochondrial oxidative phosphorylation (OXPHOS) have been reported in COVID-19 patients, but the timing and organs affected vary among reports. Here, we reveal the dynamics of COVID-19 through transcription profiles in nasopharyngeal and ... ...

    Abstract Defects in mitochondrial oxidative phosphorylation (OXPHOS) have been reported in COVID-19 patients, but the timing and organs affected vary among reports. Here, we reveal the dynamics of COVID-19 through transcription profiles in nasopharyngeal and autopsy samples from patients and infected rodent models. While mitochondrial bioenergetics is repressed in the viral nasopharyngeal portal of entry, it is up regulated in autopsy lung tissues from deceased patients. In most disease stages and organs, discrete OXPHOS functions are blocked by the virus, and this is countered by the host broadly up regulating unblocked OXPHOS functions. No such rebound is seen in autopsy heart, results in severe repression of genes across all OXPHOS modules. Hence, targeted enhancement of mitochondrial gene expression may mitigate the pathogenesis of COVID-19.
    Language English
    Publishing date 2022-02-22
    Publishing country United States
    Document type Preprint
    DOI 10.1101/2022.02.19.481089
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. McDonald, J Tyson / Enguita, Francisco Javier / Taylor, Deanne / Griffin, Robert J / Priebe, Waldemar / Emmett, Mark R / Sajadi, Mohammad M / Harris, Anthony D / Clement, Jean / Dybas, Joseph M / Aykin-Burns, Nukhet / Guarnieri, Joseph W / Singh, Larry N / Grabham, Peter / Baylin, Stephen B / Yousey, Aliza / Pearson, Andrea N / Corry, Peter M / Saravia-Butler, Amanda /
    Aunins, Thomas R / Sharma, Sadhana / Nagpal, Prashant / Meydan, Cem / Foox, Jonathan / Mozsary, Christopher / Cerqueira, Bianca / Zaksas, Viktorija / Singh, Urminder / Wurtele, Eve Syrkin / Costes, Sylvain V / Davanzo, Gustavo Gastão / Galeano, Diego / Paccanaro, Alberto / Meinig, Suzanne L / Hagan, Robert S / Bowman, Natalie M / Wolfgang, Matthew C / Altinok, Selin / Sapoval, Nicolae / Treangen, Todd J / Moraes-Vieira, Pedro M / Vanderburg, Charles / Wallace, Douglas C / Schisler, Jonathan / Mason, Christopher E / Chatterjee, Anushree / Meller, Robert / Beheshti, Afshin

    bioRxiv : the preprint server for biology

    2021  

    Abstract: MicroRNAs (miRNAs) are small non-coding RNAs involved in post-transcriptional gene regulation that have a major impact on many diseases and provides an exciting avenue towards antiviral therapeutics. From patient transcriptomic data, we have discovered a ...

    Abstract MicroRNAs (miRNAs) are small non-coding RNAs involved in post-transcriptional gene regulation that have a major impact on many diseases and provides an exciting avenue towards antiviral therapeutics. From patient transcriptomic data, we have discovered a circulating miRNA, miR-2392, that is directly involved with SARS-CoV-2 machinery during host infection. Specifically, we show that miR-2392 is key in driving downstream suppression of mitochondrial gene expression, increasing inflammation, glycolysis, and hypoxia as well as promoting many symptoms associated with COVID-19 infection. We demonstrate miR-2392 is present in the blood and urine of COVID-19 positive patients, but not detected in COVID-19 negative patients. These findings indicate the potential for developing a novel, minimally invasive, COVID-19 detection method. Lastly, using
    Language English
    Publishing date 2021-08-18
    Publishing country United States
    Document type Preprint
    DOI 10.1101/2021.04.23.441024
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Role of miR-2392 in driving SARS-CoV-2 infection.

    McDonald, J Tyson / Enguita, Francisco J / Taylor, Deanne / Griffin, Robert J / Priebe, Waldemar / Emmett, Mark R / Sajadi, Mohammad M / Harris, Anthony D / Clement, Jean / Dybas, Joseph M / Aykin-Burns, Nukhet / Guarnieri, Joseph W / Singh, Larry N / Grabham, Peter / Baylin, Stephen B / Yousey, Aliza / Pearson, Andrea N / Corry, Peter M / Saravia-Butler, Amanda /
    Aunins, Thomas R / Sharma, Sadhana / Nagpal, Prashant / Meydan, Cem / Foox, Jonathan / Mozsary, Christopher / Cerqueira, Bianca / Zaksas, Viktorija / Singh, Urminder / Wurtele, Eve Syrkin / Costes, Sylvain V / Davanzo, Gustavo Gastão / Galeano, Diego / Paccanaro, Alberto / Meinig, Suzanne L / Hagan, Robert S / Bowman, Natalie M / Wolfgang, Matthew C / Altinok, Selin / Sapoval, Nicolae / Treangen, Todd J / Moraes-Vieira, Pedro M / Vanderburg, Charles / Wallace, Douglas C / Schisler, Jonathan C / Mason, Christopher E / Chatterjee, Anushree / Meller, Robert / Beheshti, Afshin

    Cell reports

    2021  Volume 37, Issue 3, Page(s) 109839

    Abstract: MicroRNAs (miRNAs) are small non-coding RNAs involved in post-transcriptional gene regulation that have a major impact on many diseases and provide an exciting avenue toward antiviral therapeutics. From patient transcriptomic data, we determined that a ... ...

    Abstract MicroRNAs (miRNAs) are small non-coding RNAs involved in post-transcriptional gene regulation that have a major impact on many diseases and provide an exciting avenue toward antiviral therapeutics. From patient transcriptomic data, we determined that a circulating miRNA, miR-2392, is directly involved with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) machinery during host infection. Specifically, we show that miR-2392 is key in driving downstream suppression of mitochondrial gene expression, increasing inflammation, glycolysis, and hypoxia, as well as promoting many symptoms associated with coronavirus disease 2019 (COVID-19) infection. We demonstrate that miR-2392 is present in the blood and urine of patients positive for COVID-19 but is not present in patients negative for COVID-19. These findings indicate the potential for developing a minimally invasive COVID-19 detection method. Lastly, using in vitro human and in vivo hamster models, we design a miRNA-based antiviral therapeutic that targets miR-2392, significantly reduces SARS-CoV-2 viability in hamsters, and may potentially inhibit a COVID-19 disease state in humans.
    MeSH term(s) Adult ; Aged ; Aged, 80 and over ; Animals ; Antiviral Agents/pharmacology ; Biomarkers/metabolism ; COVID-19/genetics ; COVID-19/immunology ; Cricetinae ; Female ; Ferrets ; Gene Expression Regulation ; Glycolysis ; Healthy Volunteers ; Humans ; Hypoxia ; Inflammation ; Male ; Mice ; MicroRNAs/genetics ; Middle Aged ; Proteomics/methods ; ROC Curve ; Rats ; SARS-CoV-2/genetics ; COVID-19 Drug Treatment
    Chemical Substances Antiviral Agents ; Biomarkers ; MIRN2392 microRNA, human ; MicroRNAs
    Language English
    Publishing date 2021-09-30
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, P.H.S.
    ZDB-ID 2649101-1
    ISSN 2211-1247 ; 2211-1247
    ISSN (online) 2211-1247
    ISSN 2211-1247
    DOI 10.1016/j.celrep.2021.109839
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Targeted Down Regulation Of Core Mitochondrial Genes During SARS-CoV-2 Infection

    Guarnieri, Joseph W / Dybas, Joseph M / Fazelinia, Hossein / Kim, Man S / Frere, Justin / Zhang, Yuanchao / Albrecht, Yentli Soto / Murdock, Deborah G / Angelin, Alessia / Singh, Larry N / Weiss, Scott L / Best, Sonja M / Lott, Marie T / Cope, Henry / Zaksas, Viktorija / Saravia-Butler, Amanda / Meydan, Cem / Foox, Jonathan / Mozsary, Christopher /
    Kidane, Yared H / Priebe, Waldemar / Emmett, Mark / Meller, Robert / Singh, Urminder / Bram, Yaron / tenOever, Benjamin R. / Heise, Mark T. / Moorman, Nathaniel J. / Madden, Emily A. / Taft-Benz, Sharon A. / Anderson, Elizabeth J. / Sanders, Wes A. / Dickmander, Rebekah J. / Baxter, Victoria K. / Baylin, Stephen / Wurtele, Eve / Moraes-vieira, Pedro / Taylor, Deanne / Mason, Christopher / Schisler, Jonathan C / Schwartz, Robert E. / Beheshti, Afshin / Wallace, Douglas C.

    bioRxiv

    Abstract: Defects in mitochondrial oxidative phosphorylation (OXPHOS) have been reported in COVID-19 patients, but the timing and organs affected vary among reports. Here, we reveal the dynamics of COVID-19 through transcription profiles in nasopharyngeal and ... ...

    Abstract Defects in mitochondrial oxidative phosphorylation (OXPHOS) have been reported in COVID-19 patients, but the timing and organs affected vary among reports. Here, we reveal the dynamics of COVID-19 through transcription profiles in nasopharyngeal and autopsy samples from patients and infected rodent models. While mitochondrial bioenergetics is repressed in the viral nasopharyngeal portal of entry, it is up regulated in autopsy lung tissues from deceased patients. In most disease stages and organs, discrete OXPHOS functions are blocked by the virus, and this is countered by the host broadly up regulating unblocked OXPHOS functions. No such rebound is seen in autopsy heart, results in severe repression of genes across all OXPHOS modules. Hence, targeted enhancement of mitochondrial gene expression may mitigate the pathogenesis of COVID-19.
    Keywords covid19
    Language English
    Publishing date 2022-02-22
    Publisher Cold Spring Harbor Laboratory
    Document type Article ; Online
    DOI 10.1101/2022.02.19.481089
    Database COVID19

    Kategorien

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