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  1. Article ; Online: Broadly applicable TCR-based therapy for multiple myeloma targeting the immunoglobulin J chain.

    Meeuwsen, Miranda H / Wouters, Anne K / Wachsmann, Tassilo L A / Hagedoorn, Renate S / Kester, Michel G D / Remst, Dennis F G / van der Steen, Dirk M / de Ru, Arnoud H / van Hees, Els P / Kremer, Martijn / Griffioen, Marieke / van Veelen, Peter A / Falkenburg, J H Frederik / Heemskerk, Mirjam H M

    Journal of hematology & oncology

    2023  Volume 16, Issue 1, Page(s) 16

    Abstract: Background: The immunoglobulin J chain (Jchain) is highly expressed in the majority ...

    Abstract Background: The immunoglobulin J chain (Jchain) is highly expressed in the majority of multiple myeloma (MM), and Jchain-derived peptides presented in HLA molecules may be suitable antigens for T-cell therapy of MM.
    Methods: Using immunopeptidomics, we identified Jchain-derived epitopes presented by MM cells, and pHLA tetramer technology was used to isolate Jchain-specific T-cell clones.
    Results: We identified T cells specific for Jchain peptides presented in HLA-A1, -A24, -A3, and -A11 that recognized and lysed JCHAIN-positive MM cells. TCRs of the most promising T-cell clones were sequenced, cloned into retroviral vectors, and transferred to CD8 T cells. Jchain TCR T cells recognized target cells when JCHAIN and the appropriate HLA restriction alleles were expressed, while JCHAIN or HLA-negative cells, including healthy subsets, were not recognized. Patient-derived JCHAIN-positive MM samples were also lysed by Jchain TCR T cells. In a preclinical in vivo model for established MM, Jchain-A1, -A24, -A3, and -A11 TCR T cells strongly eradicated MM cells, which resulted in 100-fold lower tumor burden in Jchain TCR versus control-treated mice.
    Conclusions: We identified TCRs targeting Jchain-derived peptides presented in four common HLA alleles. All four TCRs demonstrated potent preclinical anti-myeloma activity, encouraging further preclinical testing and ultimately clinical development.
    MeSH term(s) Animals ; Mice ; Immunoglobulin J-Chains ; Multiple Myeloma/therapy ; Receptors, Antigen, T-Cell/genetics ; Alleles ; CD8-Positive T-Lymphocytes
    Chemical Substances Immunoglobulin J-Chains ; Receptors, Antigen, T-Cell
    Language English
    Publishing date 2023-02-27
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2429631-4
    ISSN 1756-8722 ; 1756-8722
    ISSN (online) 1756-8722
    ISSN 1756-8722
    DOI 10.1186/s13045-023-01408-6
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Erratum: "Efficient equilibration of confined and free-standing films of highly entangled polymer melts" [J. Chem. Phys. 153, 144902 (2020)].

    Hsu, Hsiao-Ping / Kremer, Kurt

    The Journal of chemical physics

    2022  Volume 156, Issue 1, Page(s) 19901

    Language English
    Publishing date 2022-01-05
    Publishing country United States
    Document type Journal Article ; Published Erratum
    ZDB-ID 3113-6
    ISSN 1089-7690 ; 0021-9606
    ISSN (online) 1089-7690
    ISSN 0021-9606
    DOI 10.1063/5.0081077
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Erratum: "A coarse-grained polymer model for studying the glass transition" [J. Chem. Phys. 150, 091101 (2019)].

    Hsu, Hsiao-Ping / Kremer, Kurt

    The Journal of chemical physics

    2019  Volume 150, Issue 15, Page(s) 159902

    Language English
    Publishing date 2019-04-12
    Publishing country United States
    Document type Journal Article ; Published Erratum
    ZDB-ID 3113-6
    ISSN 1089-7690 ; 0021-9606
    ISSN (online) 1089-7690
    ISSN 0021-9606
    DOI 10.1063/1.5097690
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Cluster J mycobacteriophages: intron splicing in capsid and tail genes.

    Pope, Welkin H / Jacobs-Sera, Deborah / Best, Aaron A / Broussard, Gregory W / Connerly, Pamela L / Dedrick, Rebekah M / Kremer, Timothy A / Offner, Susan / Ogiefo, Amenawon H / Pizzorno, Marie C / Rockenbach, Kate / Russell, Daniel A / Stowe, Emily L / Stukey, Joseph / Thibault, Sarah A / Conway, James F / Hendrix, Roger W / Hatfull, Graham F

    PloS one

    2013  Volume 8, Issue 7, Page(s) e69273

    Abstract: ... of unknown function. A new group of genomes sharing substantial nucleotide sequences constitute Cluster J ... The six mycobacteriophages forming Cluster J are morphologically members of the Siphoviridae, but have ... into a tRNA-Leu gene not previously identified as a mycobacterial attB site for phage integration. The Cluster J ...

    Abstract Bacteriophages isolated on Mycobacterium smegmatis mc(2)155 represent many distinct genomes sharing little or no DNA sequence similarity. The genomes are architecturally mosaic and are replete with genes of unknown function. A new group of genomes sharing substantial nucleotide sequences constitute Cluster J. The six mycobacteriophages forming Cluster J are morphologically members of the Siphoviridae, but have unusually long genomes ranging from 106.3 to 117 kbp. Reconstruction of the capsid by cryo-electron microscopy of mycobacteriophage BAKA reveals an icosahedral structure with a triangulation number of 13. All six phages are temperate and homoimmune, and prophage establishment involves integration into a tRNA-Leu gene not previously identified as a mycobacterial attB site for phage integration. The Cluster J genomes provide two examples of intron splicing within the virion structural genes, one in a major capsid subunit gene, and one in a tail gene. These genomes also contain numerous free-standing HNH homing endonuclease, and comparative analysis reveals how these could contribute to genome mosaicism. The unusual Cluster J genomes provide new insights into phage genome architecture, gene function, capsid structure, gene mobility, intron splicing, and evolution.
    MeSH term(s) Amino Acid Sequence ; Bacteriolysis/genetics ; Base Composition ; Base Sequence ; Capsid Proteins/chemistry ; Capsid Proteins/genetics ; Cluster Analysis ; DNA Transposable Elements ; Gene Order ; Genome Size ; Genome, Viral ; Introns ; Molecular Sequence Data ; Mycobacteriophages/classification ; Mycobacteriophages/genetics ; Mycobacteriophages/ultrastructure ; Open Reading Frames ; Phylogeny ; RNA Splicing ; Viral Tail Proteins/chemistry ; Viral Tail Proteins/genetics ; Virion/ultrastructure ; Virus Integration/genetics
    Chemical Substances Capsid Proteins ; DNA Transposable Elements ; Viral Tail Proteins
    Language English
    Publishing date 2013-07-09
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ISSN 1932-6203
    ISSN (online) 1932-6203
    DOI 10.1371/journal.pone.0069273
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Cluster J mycobacteriophages

    Welkin H Pope / Deborah Jacobs-Sera / Aaron A Best / Gregory W Broussard / Pamela L Connerly / Rebekah M Dedrick / Timothy A Kremer / Susan Offner / Amenawon H Ogiefo / Marie C Pizzorno / Kate Rockenbach / Daniel A Russell / Emily L Stowe / Joseph Stukey / Sarah A Thibault / James F Conway / Roger W Hendrix / Graham F Hatfull

    PLoS ONE, Vol 8, Iss 7, p e

    intron splicing in capsid and tail genes.

    2013  Volume 69273

    Abstract: ... of unknown function. A new group of genomes sharing substantial nucleotide sequences constitute Cluster J ... The six mycobacteriophages forming Cluster J are morphologically members of the Siphoviridae, but have ... into a tRNA-Leu gene not previously identified as a mycobacterial attB site for phage integration. The Cluster J ...

    Abstract Bacteriophages isolated on Mycobacterium smegmatis mc(2)155 represent many distinct genomes sharing little or no DNA sequence similarity. The genomes are architecturally mosaic and are replete with genes of unknown function. A new group of genomes sharing substantial nucleotide sequences constitute Cluster J. The six mycobacteriophages forming Cluster J are morphologically members of the Siphoviridae, but have unusually long genomes ranging from 106.3 to 117 kbp. Reconstruction of the capsid by cryo-electron microscopy of mycobacteriophage BAKA reveals an icosahedral structure with a triangulation number of 13. All six phages are temperate and homoimmune, and prophage establishment involves integration into a tRNA-Leu gene not previously identified as a mycobacterial attB site for phage integration. The Cluster J genomes provide two examples of intron splicing within the virion structural genes, one in a major capsid subunit gene, and one in a tail gene. These genomes also contain numerous free-standing HNH homing endonuclease, and comparative analysis reveals how these could contribute to genome mosaicism. The unusual Cluster J genomes provide new insights into phage genome architecture, gene function, capsid structure, gene mobility, intron splicing, and evolution.
    Keywords Medicine ; R ; Science ; Q
    Subject code 572
    Language English
    Publishing date 2013-01-01T00:00:00Z
    Publisher Public Library of Science (PLoS)
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  6. Article ; Online: Pressure response of amide one-bond J-couplings in model peptides and proteins.

    Koehler, Joerg / Beck Erlach, Markus / Crusca, Edson / Kremer, Werner / Munte, Claudia E / Meier, Alexander / Kalbitzer, Hans Robert

    Journal of biomolecular NMR

    2014  Volume 60, Issue 1, Page(s) 45–50

    Abstract: The pressure dependence of the one-bond indirect spin-spin coupling constants (1)J(N-H) was studied ... The response of the (1)J(N-H) coupling constants is amino acid type specific, with an average increase ... The size of the J-coupling constant at high pressure is positively correlated with its low pressure value ...

    Abstract The pressure dependence of the one-bond indirect spin-spin coupling constants (1)J(N-H) was studied in the protected tetrapeptides Ac-Gly-Gly-Xxx-Ala-NH2 (with Xxx being one of the 20 proteinogenic amino acids). The response of the (1)J(N-H) coupling constants is amino acid type specific, with an average increase of its magnitude by 0.6 Hz at 200 MPa. The variance of the pressure response is rather large, the largest pressure effect is observed for asparagine where the coupling constant becomes more negative by -2.9 Hz at 200 MPa. The size of the J-coupling constant at high pressure is positively correlated with its low pressure value and the β-propensity, and negatively correlated with the amide proton shift and the first order nitrogen pressure coefficient and the electrostatic solvation free energy.
    MeSH term(s) Amides/chemistry ; Nuclear Magnetic Resonance, Biomolecular/methods ; Peptides/chemistry ; Pressure ; Proteins/chemistry
    Chemical Substances Amides ; Peptides ; Proteins
    Language English
    Publishing date 2014-08-13
    Publishing country Netherlands
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1081696-3
    ISSN 1573-5001 ; 0925-2738
    ISSN (online) 1573-5001
    ISSN 0925-2738
    DOI 10.1007/s10858-014-9850-2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Erratum: "Adaptive resolution simulation of a biomolecule and its hydration shell: Structural and dynamical properties" [J. Chem. Phys. 142, 195101 (2015)].

    Fogarty, Aoife C / Potestio, Raffaello / Kremer, Kurt

    The Journal of chemical physics

    2017  Volume 146, Issue 4, Page(s) 49901

    Language English
    Publishing date 2017-01-26
    Publishing country United States
    Document type Journal Article ; Published Erratum
    ZDB-ID 3113-6
    ISSN 1089-7690 ; 0021-9606
    ISSN (online) 1089-7690
    ISSN 0021-9606
    DOI 10.1063/1.4975169
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Corrigendum to "Long-term functional outcome and patient satisfaction after ulnar head resection" [J Plast Reconstr Aesthet Surg 69 (2016), 1417-1423].

    Hernekamp, Jochen-Frederick / Yary, Pouyan / Bigdeli, Amir Khosrow / Hirche, Christoph / Bickert, Berthold / Kneser, Ulrich / Kremer, Thomas

    Journal of plastic, reconstructive & aesthetic surgery : JPRAS

    2016  Volume 69, Issue 12, Page(s) 1719

    Language English
    Publishing date 2016
    Publishing country Netherlands
    Document type Journal Article ; Published Erratum
    ZDB-ID 2217750-4
    ISSN 1878-0539 ; 1748-6815 ; 0007-1226
    ISSN (online) 1878-0539
    ISSN 1748-6815 ; 0007-1226
    DOI 10.1016/j.bjps.2016.10.001
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Zeosil Nanoslabs: Building Blocks in nPr(4)N(+)-Mediated Synthesis of MFI Zeolite C.E.A.K., J.A.M., and P.A.J. acknowledge the Belgian Government for sponsoring in the frame of IUAP-PAI program. J.A.M. and P.A.J. acknowledge FWO Vlaanderen for a research grant.

    Kirschhock, Christine E. A. / Buschmann, Véronique / Kremer, Sebastien / Ravishankar, Raman / Houssin, Christophe J. Y. / Mojet, Barbara L. / van Santen, Rutger A. / Grobet, Piet J. / Jacobs, Pierre A. / Martens, Johan A.

    Angewandte Chemie (International ed. in English)

    2001  Volume 40, Issue 14, Page(s) 2637–2640

    Language English
    Publishing date 2001-07-16
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 2011836-3
    ISSN 1521-3773 ; 1433-7851
    ISSN (online) 1521-3773
    ISSN 1433-7851
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Response to "Comment on 'Molecular dynamics simulation study of nonconcatenated ring polymers in a melt. I. Statics"' [J. Chem. Phys. 139, 217101 (2013)].

    Halverson, Jonathan D / Lee, Won Bo / Grest, Gary S / Grosberg, Alexander Y / Kremer, Kurt

    The Journal of chemical physics

    2013  Volume 139, Issue 21, Page(s) 217102

    Language English
    Publishing date 2013-12-07
    Publishing country United States
    Document type Comment ; Letter
    ZDB-ID 3113-6
    ISSN 1089-7690 ; 0021-9606
    ISSN (online) 1089-7690
    ISSN 0021-9606
    DOI 10.1063/1.4833175
    Database MEDical Literature Analysis and Retrieval System OnLINE

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