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  1. Article ; Online: Cathepsin F mutations cause Type B Kufs disease, an adult-onset neuronal ceroid lipofuscinosis.

    Smith, Katherine R / Dahl, Hans-Henrik M / Canafoglia, Laura / Andermann, Eva / Damiano, John / Morbin, Michela / Bruni, Amalia C / Giaccone, Giorgio / Cossette, Patrick / Saftig, Paul / Grötzinger, Joachim / Schwake, Michael / Andermann, Frederick / Staropoli, John F / Sims, Katherine B / Mole, Sara E / Franceschetti, Silvana / Alexander, Noreen A / Cooper, Jonathan D /
    Chapman, Harold A / Carpenter, Stirling / Berkovic, Samuel F / Bahlo, Melanie

    Human molecular genetics

    2013  Volume 22, Issue 7, Page(s) 1417–1423

    Abstract: ... CTSF encodes cathepsin F, a lysosomal cysteine protease, dysfunction of which is a highly plausible ...

    Abstract Kufs disease, an adult-onset neuronal ceroid lipofuscinosis, is challenging to diagnose and genetically heterogeneous. Mutations in CLN6 were recently identified in recessive Kufs disease presenting as progressive myoclonus epilepsy (Type A), whereas the molecular basis of cases presenting with dementia and motor features (Type B) is unknown. We performed genome-wide linkage mapping of two families with recessive Type B Kufs disease and identified a single region on chromosome 11 to which both families showed linkage. Exome sequencing of five samples from the two families identified homozygous and compound heterozygous missense mutations in CTSF within this linkage region. We subsequently sequenced CTSF in 22 unrelated individuals with suspected recessive Kufs disease, and identified an additional patient with compound heterozygous mutations. CTSF encodes cathepsin F, a lysosomal cysteine protease, dysfunction of which is a highly plausible candidate mechanism for a storage disorder like ceroid lipofuscinosis. In silico modeling suggested the missense mutations would alter protein structure and function. Moreover, re-examination of a previously published mouse knockout of Ctsf shows that it recapitulates the light and electron-microscopic pathological features of Kufs disease. Although CTSF mutations account for a minority of cases of type B Kufs, CTSF screening should be considered in cases with early-onset dementia and may avoid the need for invasive biopsies.
    MeSH term(s) Adult ; Animals ; Anterior Horn Cells/pathology ; Case-Control Studies ; Cathepsin F/genetics ; Cathepsin F/metabolism ; Chromosome Mapping ; Consanguinity ; DNA Mutational Analysis ; Exome ; Female ; Genetic Association Studies ; Humans ; Lod Score ; Mice ; Mice, Knockout ; Middle Aged ; Models, Molecular ; Mutation, Missense ; Neuronal Ceroid-Lipofuscinoses/enzymology ; Neuronal Ceroid-Lipofuscinoses/genetics ; Neuronal Ceroid-Lipofuscinoses/pathology ; Pedigree ; Protein Structure, Secondary ; Protein Structure, Tertiary ; Sequence Analysis, RNA
    Chemical Substances CTSF protein, human (EC 3.4.22.41) ; Cathepsin F (EC 3.4.22.41)
    Language English
    Publishing date 2013-01-07
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 1108742-0
    ISSN 1460-2083 ; 0964-6906
    ISSN (online) 1460-2083
    ISSN 0964-6906
    DOI 10.1093/hmg/dds558
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Altered binaural hearing in pre-ataxic and ataxic mutation carriers of spinocerebellar ataxia type 3.

    Jacobi, Heike / Andermann, Martin / Faber, Jennifer / Baumann, Felicitas / Rupp, André

    Cerebellum (London, England)

    2023  Volume 23, Issue 1, Page(s) 172–180

    Abstract: Brainstem degeneration is a prominent feature of spinocerebellar ataxia type 3 (SCA3), involving structures that execute binaural synchronization with microsecond precision. As a consequence, auditory processing may deteriorate during the course of ... ...

    Abstract Brainstem degeneration is a prominent feature of spinocerebellar ataxia type 3 (SCA3), involving structures that execute binaural synchronization with microsecond precision. As a consequence, auditory processing may deteriorate during the course of disease. We tested whether the binaural "Huggins pitch" effect is suitable to study the temporal precision of brainstem functioning in SCA3 mutation carriers. We expected that they would have difficulties perceiving Huggins pitch at high frequencies, and that they would show attenuated neuromagnetic responses to Huggins pitch. The upper limit of Huggins pitch perception was psychoacoustically determined in 18 pre-ataxic and ataxic SCA3 mutation carriers and in 18 age-matched healthy controls. Moreover, the cortical N100 response following Huggins pitch onset was acquired by means of magnetoencephalography (MEG). MEG recordings were analyzed using dipole source modeling and comprised a monaural pitch condition and a no-pitch condition with simple binaural correlation changes. Compared with age-matched controls, ataxic but not pre-ataxic SCA3 mutation carriers had significantly lower frequency limits up to which Huggins pitch could be heard. Listeners with lower frequency limits also showed diminished MEG responses to Huggins pitch, but not in the two control conditions. Huggins pitch is a promising tool to assess brainstem functioning in ataxic SCA3 patients. Future studies should refine the psychophysiological setup to capture possible performance decrements also in pre-ataxic mutation carriers. Longitudinal observations will be needed to prove the potential of the assessment of Huggins pitch as a biomarker to track brainstem functioning during the disease course in SCA3.
    MeSH term(s) Humans ; Machado-Joseph Disease/genetics ; Hearing ; Pitch Perception/physiology ; Magnetoencephalography ; Mutation/genetics
    Language English
    Publishing date 2023-01-30
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2112586-7
    ISSN 1473-4230 ; 1473-4222
    ISSN (online) 1473-4230
    ISSN 1473-4222
    DOI 10.1007/s12311-023-01519-3
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Undiscovered bird extinctions obscure the true magnitude of human-driven extinction waves.

    Cooke, Rob / Sayol, Ferran / Andermann, Tobias / Blackburn, Tim M / Steinbauer, Manuel J / Antonelli, Alexandre / Faurby, Søren

    Nature communications

    2023  Volume 14, Issue 1, Page(s) 8116

    Abstract: Birds are among the best-studied animal groups, but their prehistoric diversity is poorly known due to low fossilization potential. Hence, while many human-driven bird extinctions (i.e., extinctions caused directly by human activities such as hunting, as ...

    Abstract Birds are among the best-studied animal groups, but their prehistoric diversity is poorly known due to low fossilization potential. Hence, while many human-driven bird extinctions (i.e., extinctions caused directly by human activities such as hunting, as well as indirectly through human-associated impacts such as land use change, fire, and the introduction of invasive species) have been recorded, the true number is likely much larger. Here, by combining recorded extinctions with model estimates based on the completeness of the fossil record, we suggest that at least ~1300-1500 bird species (~12% of the total) have gone extinct since the Late Pleistocene, with 55% of these extinctions undiscovered (not yet discovered or left no trace). We estimate that the Pacific accounts for 61% of total bird extinctions. Bird extinction rate varied through time with an intense episode ~1300 CE, which likely represents the largest human-driven vertebrate extinction wave ever, and a rate 80 (60-95) times the background extinction rate. Thus, humans have already driven more than one in nine bird species to extinction, with likely severe, and potentially irreversible, ecological and evolutionary consequences.
    MeSH term(s) Animals ; Birds ; Extinction, Biological ; Introduced Species ; Anthropogenic Effects
    Language English
    Publishing date 2023-12-19
    Publishing country England
    Document type Journal Article
    ZDB-ID 2553671-0
    ISSN 2041-1723 ; 2041-1723
    ISSN (online) 2041-1723
    ISSN 2041-1723
    DOI 10.1038/s41467-023-43445-2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Rasmussen encephalitis and comorbid autoimmune diseases: A window into disease mechanism?

    Amrom, Dina / Kinay, Demet / Andermann, Frederick / Andermann, Eva

    Neurology

    2015  Volume 84, Issue 16, Page(s) 1721

    MeSH term(s) Autoimmune Diseases/immunology ; Encephalitis/immunology ; Female ; Hashimoto Disease/immunology ; Humans ; Male
    Language English
    Publishing date 2015-04-21
    Publishing country United States
    Document type Comment ; Letter
    ZDB-ID 207147-2
    ISSN 1526-632X ; 0028-3878
    ISSN (online) 1526-632X
    ISSN 0028-3878
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Rare transmission of commensal and pathogenic bacteria in the gut microbiome of hospitalized adults.

    Siranosian, Benjamin A / Brooks, Erin F / Andermann, Tessa / Rezvani, Andrew R / Banaei, Niaz / Tang, Hua / Bhatt, Ami S

    Nature communications

    2022  Volume 13, Issue 1, Page(s) 586

    Abstract: Bacterial bloodstream infections are a major cause of morbidity and mortality among patients undergoing hematopoietic cell transplantation (HCT). Although previous research has demonstrated that pathogens may translocate from the gut microbiome into the ... ...

    Abstract Bacterial bloodstream infections are a major cause of morbidity and mortality among patients undergoing hematopoietic cell transplantation (HCT). Although previous research has demonstrated that pathogens may translocate from the gut microbiome into the bloodstream to cause infections, the mechanisms by which HCT patients acquire pathogens in their microbiome have not yet been described. Here, we use linked-read and short-read metagenomic sequencing to analyze 401 stool samples collected from 149 adults undergoing HCT and hospitalized in the same unit over three years, many of whom were roommates. We use metagenomic assembly and strain-specific comparison methods to search for high-identity bacterial strains, which may indicate transmission between the gut microbiomes of patients. Overall, the microbiomes of patients who share time and space in the hospital do not converge in taxonomic composition. However, we do observe six pairs of patients who harbor identical or nearly identical strains of the pathogen Enterococcus faecium, or the gut commensals Akkermansia muciniphila and Hungatella hathewayi. These shared strains may result from direct transmission between patients who shared a room and bathroom, acquisition from a common hospital source, or transmission from an unsampled intermediate. We also identify multiple patients with identical strains of species commonly found in commercial probiotics, including Lactobacillus rhamnosus and Streptococcus thermophilus. In summary, our findings indicate that sharing of identical pathogens between the gut microbiomes of multiple patients is a rare phenomenon. Furthermore, the observed potential transmission of commensal, immunomodulatory microbes suggests that exposure to other humans may contribute to microbiome reassembly post-HCT.
    MeSH term(s) Adult ; Aged ; Anti-Bacterial Agents/pharmacology ; Bacteria/metabolism ; Bacterial Infections/transmission ; Cross Infection/microbiology ; Cross Infection/transmission ; Drug Resistance, Microbial/drug effects ; Drug Resistance, Microbial/genetics ; Enterococcus faecium/drug effects ; Enterococcus faecium/isolation & purification ; Escherichia coli/drug effects ; Escherichia coli/isolation & purification ; Female ; Gastrointestinal Microbiome/drug effects ; Hematopoietic Stem Cell Transplantation ; Hospitalization ; Hospitals ; Humans ; Length of Stay ; Male ; Metagenome/genetics ; Metagenomics ; Middle Aged ; Phylogeny ; Probiotics ; Sequence Analysis, DNA ; Time Factors
    Chemical Substances Anti-Bacterial Agents
    Language English
    Publishing date 2022-01-31
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S. ; Research Support, U.S. Gov't, P.H.S.
    ZDB-ID 2553671-0
    ISSN 2041-1723 ; 2041-1723
    ISSN (online) 2041-1723
    ISSN 2041-1723
    DOI 10.1038/s41467-022-28048-7
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Early cortical processing of pitch height and the role of adaptation and musicality.

    Andermann, Martin / Günther, Melanie / Patterson, Roy D / Rupp, André

    NeuroImage

    2020  Volume 225, Page(s) 117501

    Abstract: ... correlates are shaped by absolute vs relative fundamental frequency (f ...

    Abstract Pitch is an important perceptual feature; however, it is poorly understood how its cortical correlates are shaped by absolute vs relative fundamental frequency (f
    MeSH term(s) Adaptation, Physiological ; Adult ; Auditory Cortex/physiology ; Evoked Potentials, Auditory/physiology ; Female ; Humans ; Magnetoencephalography ; Male ; Music ; Pitch Perception/physiology ; Young Adult
    Language English
    Publishing date 2020-10-24
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1147767-2
    ISSN 1095-9572 ; 1053-8119
    ISSN (online) 1095-9572
    ISSN 1053-8119
    DOI 10.1016/j.neuroimage.2020.117501
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: Competition between stochastic neuropeptide signals calibrates the rate of satiation.

    Zhang, Stephen X / Kim, Angela / Madara, Joseph C / Zhu, Paula K / Christenson, Lauren F / Lutas, Andrew / Kalugin, Peter N / Jin, Yihan / Pal, Akash / Tian, Lin / Lowell, Bradford B / Andermann, Mark L

    Research square

    2023  

    Abstract: We investigated how transmission of hunger- and satiety-promoting neuropeptides, NPY and αMSH, is integrated at the level of intracellular signaling to control feeding. Receptors for these peptides use the second messenger cAMP. How cAMP integrates ... ...

    Abstract We investigated how transmission of hunger- and satiety-promoting neuropeptides, NPY and αMSH, is integrated at the level of intracellular signaling to control feeding. Receptors for these peptides use the second messenger cAMP. How cAMP integrates opposing peptide signals to regulate energy balance, and the
    Language English
    Publishing date 2023-07-26
    Publishing country United States
    Document type Preprint
    DOI 10.21203/rs.3.rs-3185572/v1
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article: Competition between stochastic neuropeptide signals calibrates the rate of satiation.

    Zhang, Stephen X / Kim, Angela / Madara, Joseph C / Zhu, Paula K / Christenson, Lauren F / Lutas, Andrew / Kalugin, Peter N / Jin, Yihan / Pal, Akash / Tian, Lin / Lowell, Bradford B / Andermann, Mark L

    bioRxiv : the preprint server for biology

    2023  

    Abstract: We investigated how transmission of hunger- and satiety-promoting neuropeptides, NPY and αMSH, is integrated at the level of intracellular signaling to control feeding. Receptors for these peptides use the second messenger cAMP, but the messenger's ... ...

    Abstract We investigated how transmission of hunger- and satiety-promoting neuropeptides, NPY and αMSH, is integrated at the level of intracellular signaling to control feeding. Receptors for these peptides use the second messenger cAMP, but the messenger's spatiotemporal dynamics and role in energy balance are controversial. We show that AgRP axon stimulation in the paraventricular hypothalamus evokes probabilistic and spatially restricted NPY release that triggers stochastic cAMP decrements in downstream MC4R-expressing neurons (PVH
    Language English
    Publishing date 2023-07-12
    Publishing country United States
    Document type Preprint
    DOI 10.1101/2023.07.11.548551
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: A life in epilepsy.

    Andermann, Eva / Andermann, Frederick

    Epilepsia

    2010  Volume 51 Suppl 1, Page(s) 101–103

    MeSH term(s) Anticonvulsants/therapeutic use ; Epilepsy/physiopathology ; Epilepsy/psychology ; Epilepsy/therapy ; Humans ; Quality of Life/psychology
    Chemical Substances Anticonvulsants
    Language English
    Publishing date 2010-02
    Publishing country United States
    Document type Journal Article ; Portraits
    ZDB-ID 216382-2
    ISSN 1528-1167 ; 0013-9580
    ISSN (online) 1528-1167
    ISSN 0013-9580
    DOI 10.1111/j.1528-1167.2009.02462.x
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article: Why study mesial temporal atrophy in patients with intractable temporal lobe epilepsy?

    Andermann, F

    Journal of neurology, neurosurgery, and psychiatry

    2003  Volume 74, Issue 12, Page(s) 1606–1607

    MeSH term(s) Atrophy/complications ; Atrophy/pathology ; Atrophy/surgery ; Epilepsy, Temporal Lobe/etiology ; Epilepsy, Temporal Lobe/pathology ; Epilepsy, Temporal Lobe/surgery ; Humans ; Temporal Lobe/pathology ; Temporal Lobe/surgery
    Language English
    Publishing date 2003-10-01
    Publishing country England
    Document type Comment ; Editorial
    ZDB-ID 3087-9
    ISSN 1468-330X ; 0022-3050
    ISSN (online) 1468-330X
    ISSN 0022-3050
    DOI 10.1136/jnnp.74.12.1606
    Database MEDical Literature Analysis and Retrieval System OnLINE

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