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  1. Article ; Online: Characterization of the emerging B.1.621 variant of interest of SARS-CoV-2.

    Laiton-Donato, Katherine / Franco-Muñoz, Carlos / Álvarez-Díaz, Diego A / Ruiz-Moreno, Hector Alejandro / Usme-Ciro, José A / Prada, Diego Andrés / Reales-González, Jhonnatan / Corchuelo, Sheryll / Herrera-Sepúlveda, María T / Naizaque, Julian / Santamaría, Gerardo / Rivera, Jorge / Rojas, Paola / Ortiz, Juan Hernández / Cardona, Andrés / Malo, Diana / Prieto-Alvarado, Franklin / Gómez, Fernando Ruiz / Wiesner, Magdalena /
    Martínez, Martha Lucia Ospina / Mercado-Reyes, Marcela

    Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases

    2021  Volume 95, Page(s) 105038

    Abstract: ... of the B.1.621 lineage, considered a variant of interest (VOI) with the accumulation ... the biological and epidemiologic roles of the substitution pattern found in the B.1.621 lineage. ...

    Abstract Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) genetic diversity has the potential to impact the virus transmissibility and the escape from natural infection- or vaccine-elicited neutralizing antibodies. Here, representative samples from circulating SARS-CoV-2 in Colombia between January and April 2021, were processed for genome sequencing and lineage determination following the nanopore amplicon ARTIC network protocol and PANGOLIN pipeline. This strategy allowed us to identify the emergence of the B.1.621 lineage, considered a variant of interest (VOI) with the accumulation of several substitutions affecting the Spike protein, including the amino acid changes I95I, Y144T, Y145S and the insertion 146 N in the N-terminal domain, R346K, E484K and N501Y in the Receptor binding Domain (RBD) and P681H in the S1/S2 cleavage site of the Spike protein. The rapid increase in frequency and fixation in a relatively short time in Magdalena, Atlantico, Bolivar, Bogotá D.C, and Santander that were near the theoretical herd immunity suggests an epidemiologic impact. Further studies will be required to assess the biological and epidemiologic roles of the substitution pattern found in the B.1.621 lineage.
    MeSH term(s) Amino Acid Substitution ; COVID-19/epidemiology ; COVID-19/transmission ; COVID-19/virology ; Colombia/epidemiology ; Epidemiological Monitoring ; Evolution, Molecular ; Genome, Viral ; High-Throughput Nucleotide Sequencing ; Humans ; Mutation ; Phylogeny ; Phylogeography ; Protein Domains ; SARS-CoV-2/classification ; SARS-CoV-2/genetics ; SARS-CoV-2/pathogenicity ; Severity of Illness Index ; Spike Glycoprotein, Coronavirus/genetics
    Chemical Substances Spike Glycoprotein, Coronavirus ; spike protein, SARS-CoV-2
    Language English
    Publishing date 2021-08-14
    Publishing country Netherlands
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2037068-4
    ISSN 1567-7257 ; 1567-1348
    ISSN (online) 1567-7257
    ISSN 1567-1348
    DOI 10.1016/j.meegid.2021.105038
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Characterization of the emerging B.1.621 variant of interest of SARS-CoV-2

    Laiton-Donato, Katherine / Franco-Muñoz, Carlos / Álvarez-Díaz, Diego A. / Ruiz-Moreno, Hector Alejandro / Usme-Ciro, José A. / Prada, Diego Andrés / Reales-González, Jhonnatan / Corchuelo, Sheryll / Herrera-Sepúlveda, María T. / Naizaque, Julian / Santamaría, Gerardo / Rivera, Jorge / Rojas, Paola / Ortiz, Juan Hernández / Cardona, Andrés / Malo, Diana / Prieto-Alvarado, Franklin / Gómez, Fernando Ruiz / Wiesner, Magdalena /
    Martínez, Martha Lucia Ospina / Mercado-Reyes, Marcela

    Infection, genetics, and evolution. 2021 Nov., v. 95

    2021  

    Abstract: ... of the B.1.621 lineage, considered a variant of interest (VOI) with the accumulation ... the biological and epidemiologic roles of the substitution pattern found in the B.1.621 lineage. ...

    Abstract Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) genetic diversity has the potential to impact the virus transmissibility and the escape from natural infection- or vaccine-elicited neutralizing antibodies. Here, representative samples from circulating SARS-CoV-2 in Colombia between January and April 2021, were processed for genome sequencing and lineage determination following the nanopore amplicon ARTIC network protocol and PANGOLIN pipeline. This strategy allowed us to identify the emergence of the B.1.621 lineage, considered a variant of interest (VOI) with the accumulation of several substitutions affecting the Spike protein, including the amino acid changes I95I, Y144T, Y145S and the insertion 146 N in the N-terminal domain, R346K, E484K and N501Y in the Receptor binding Domain (RBD) and P681H in the S1/S2 cleavage site of the Spike protein. The rapid increase in frequency and fixation in a relatively short time in Magdalena, Atlantico, Bolivar, Bogotá D.C, and Santander that were near the theoretical herd immunity suggests an epidemiologic impact. Further studies will be required to assess the biological and epidemiologic roles of the substitution pattern found in the B.1.621 lineage.
    Keywords Severe acute respiratory syndrome coronavirus 2 ; amino acids ; evolution ; genetic variation ; genome ; herd immunity ; infection ; nanopores ; viruses ; Colombia
    Language English
    Dates of publication 2021-11
    Publishing place Elsevier B.V.
    Document type Article
    ZDB-ID 2037068-4
    ISSN 1567-1348
    ISSN 1567-1348
    DOI 10.1016/j.meegid.2021.105038
    Database NAL-Catalogue (AGRICOLA)

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  3. Article ; Online: Characterization of the emerging B.1.621 variant of interest of SARS-CoV-2

    Laiton-Donato, Katherine / Franco-Munoz, Carlos / Alvarez-Diaz, Diego Alejandro / Ruiz-Moreno, Hector / Usme-Ciro, Jose / Prada, Diego / Reales, Jhonnatan / Corchuelo, Sheryll / Herrera-sepulveda, Maria / Naizaque, Julian / Santamaria, Gerardo / Rivera, Jorge / Rojas, Paola / Cardona Rios, Andres / Hernandez-Ortiz, Juan / Malo, Diana / Prieto, Franklin / Ruiz-Gomez, Fernando / Wiesner, Magdalena /
    Ospina-Martinez, Martha Lucia / Mercado-Reyes, Marcela

    medRxiv

    Abstract: ... the emergence of novel B.1.621 variant of interest with the insertion 145N in the N-terminal domain and ... impact of B.1.621 variant. ...

    Abstract The SARS-CoV-2 genetic diversification has a potential impact in the virus escape from natural infection- or vaccine-elicited neutralizing antibodies and higher transmissibility. Here we report the emergence of novel B.1.621 variant of interest with the insertion 145N in the N-terminal domain and amino acid change N501Y, E484K, and P681H in the Receptor Binding Domain of the Spike protein. Further studies in vitro biological assays and epidemiologic analysis will allow evaluating the public health impact of B.1.621 variant.
    Keywords covid19
    Language English
    Publishing date 2021-05-10
    Publisher Cold Spring Harbor Laboratory Press
    Document type Article ; Online
    DOI 10.1101/2021.05.08.21256619
    Database COVID19

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  4. Article: Zinc: The Wonder Drug for the Treatment of Carcinomas.

    Costello, Leslie C / Franklin, Renty B

    Acta scientific cancer biology

    2020  Volume 4, Issue 5, Page(s) 33–39

    Abstract: Evidence is evolving that support the relationship that all carcinomas exhibit the following important relationships: The malignant cells exhibit a significant decreased zinc compared to the normal cells. The higher zinc levels that exist in the normal ... ...

    Abstract Evidence is evolving that support the relationship that all carcinomas exhibit the following important relationships: The malignant cells exhibit a significant decreased zinc compared to the normal cells. The higher zinc levels that exist in the normal cells are cytotoxic in the malignant cells. The decrease in zinc is due to the down regulation of the ZIP-family zinc uptake transporter. These cells are as "ZIP-deficient/decreased zinc" malignancies. This provides a target for a chemotherapy that can restore the high zinc levels that will manifest cytotoxic effects in the malignant cells. In order to achieve this, a vehicle that facilitates the uptake and accumulation of zinc in the ZIP-deficient cells is required. The zinc ionophore, clioquinol, exhibits the properties that will provide these requirements. This is demonstrated by the treatment of a patient with 3% Clioquinol Cream, which successfully suppressed the progression of androgen-dependent prostate cancer. This treatment should also be efficacious for pancreatic cancer, liver cancer, breast cancer, thyroid cancer, kidney cancer, stomach cancer, gall bladder cancer, and lung cancer; which are carcinomas that exhibit decreased zinc. Thus, it is appropriate to describe that "Zinc is the wonder drug for the treatment of carcinomas".
    Language English
    Publishing date 2020-04-27
    Publishing country India
    Document type Journal Article
    DOI 10.31080/ascb.2020.04.0223
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: The implications of the hypocitricemic response to surgery and the role of liver function and hepatocyte metabolism: An important, but neglected, clinical relationship.

    Costello, Leslie C / Franklin, Renty B

    Journal of liver research, disorders & therapy

    2018  Volume 4, Issue 3, Page(s) 114–119

    Abstract: ... will generate interest and research that should be integrated into contemporary issues that involve surgical ...

    Abstract Reported studies more than forty years ago established that all surgery patients exhibit a marked postoperative hypocitricemia within one day following surgery and persists for seven days and longer. Animals also exhibit the postoperative hypocitricemia. The hypocitricemia results from increased liver clearance of plasma citrate, in which the hepatocytes become capable of transporting and utilizing citrate from plasma. This represents a physiologic/metabolic response during the patient recovery from surgery. The extensive hypocitricemia in response to surgery is not manifested by known citricemic hormones, but is initiated via an unidentified putative endocrine hypocitricemic hormone. In addition to the importance relating to surgery patients, the surgical hypocitricemic effects, along with the liver and hepatic cell effects, will impact virtually all human and animal clinical and experimental studies that include surgical intervention; including the conclusions and translational clinical implications. Unfortunately, the hypocitricemic response to surgery has been ignored for the past forty years, and most contemporary clinicians and biomedical investigators are not aware of this clinical relationship. The intent of this review is to inform members of the medical community of the established hypocitricemic response to surgery and the important role of liver clearance and hepatocyte metabolism of plasma citrate; which, hopefully, will generate interest and research that should be integrated into contemporary issues that involve surgical intervention.
    Language English
    Publishing date 2018-06-08
    Publishing country United States
    Document type Journal Article
    ISSN 2471-1381
    ISSN (online) 2471-1381
    DOI 10.15406/jlrdt.2018.04.00112
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: A Proposed Efficacious Treatment with Clioquinol (Zinc Ionophore) and Cabergoline (Prolactin Dopamine Agonist) for the Treatment of Terminal Androgen-independent Prostate Cancer. Why and How?

    Costello, Leslie C / Franklin, Renty B

    Journal of clinical research in oncology

    2018  Volume 2, Issue 1

    Abstract: All cases of prostate cancer exhibit the hallmark condition of marked decrease in zinc in malignancy compared to the high zinc levels in the normal and benign prostate. There exists no reported corroborated case of prostate cancer in which malignancy ... ...

    Abstract All cases of prostate cancer exhibit the hallmark condition of marked decrease in zinc in malignancy compared to the high zinc levels in the normal and benign prostate. There exists no reported corroborated case of prostate cancer in which malignancy exhibits the high zinc levels that exist in the normal prostate acinar epithelium. The decrease in zinc is achieved by the downregulation of ZIP1 zinc transporter, which prevents the uptake and accumulation of cytotoxic zinc levels. Thus, prostate cancer is a "ZIP1-deficient" malignancy. Testosterone and prolactin are the major hormones that similarly regulate the growth, proliferation, metabolism, and functional activities of the acinar epithelial cells in the peripheral zone (the site of development and progression of malignancy). Testosterone regulation provides the basis for androgen ablation treatment of advanced prostate cancer, which leads to the development of terminal androgen-independent malignancy. Androgen-independent malignancy progresses under the influence of prolactin. These relationships provide the basis for the prevention and treatment of advanced prostate cancer. Clioquinol (zinc ionophore; 5-chloro-7-iodoquinolin-8-ol) is employed to facilitate zinc transport and accumulation in the ZIP1-deficient malignant cells and induce cytotoxic effects. Cabergoline (dopamine agonist) is employed to decrease prolactin production and its role in the progression of androgen-independent malignancy. We propose a clioquinol/cabergoline treatment regimen that will be efficacious for aborting terminal advanced prostate cancer. FDA policies permit this treatment regimen to be employed for these patients.
    Language English
    Publishing date 2018-02-05
    Publishing country United States
    Document type Journal Article
    ISSN 2639-8230
    ISSN (online) 2639-8230
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: Energy Dispersive X-Ray Fluorescence Zn/Fe Ratiometric Determination of Zinc Levels in Expressed Prostatic Fluid: A Direct, Non-Invasive and Highly Accurate Screening for Prostate Cancer.

    Costello, Leslie C / Franklin, Renty B

    Acta scientific cancer biology

    2018  Volume 2, Issue 9, Page(s) 20–26

    Abstract: Prostate specific antigen (PSA) does not provide the reliability that is required for the accurate urology screening of prostate cancer (PCa). Consequently, there has been a major focus and search for a simple, rapid, direct, preferably non-invasive, and ...

    Abstract Prostate specific antigen (PSA) does not provide the reliability that is required for the accurate urology screening of prostate cancer (PCa). Consequently, there has been a major focus and search for a simple, rapid, direct, preferably non-invasive, and highly accurate biomarker and procedure for the urology screening for prostate cancer. Virtually all PCa cases exhibit a marked decrease in zinc in prostate tissue and in prostatic fluid. This is a hallmark "signature" clinical characteristic for all prostate cancers, which provides the clinical basis for zinc screening of PCa. Energy dispersive x-ray fluorescence (EDXRF) of zinc levels in expressed prostatic fluid (EPF) provides > 90% accuracy for the identification of prostate cancer vs normal/benign prostate. An energy dispersive x-ray fluorescence (EDXRF) Zn/Fe ratiometric analysis of expressed prostatic fluid (EPF) can provide > 90% accuracy for the identification of prostate cancer vs normal/benign prostate. This will be achieved by direct EDXRF analysis of a "drop" of EPF directly deposited on a filter paper disc during the urology digital rectal examination of the subject. Interfering and confounding conditions that besiege PSA do not exist in the EDXRF Zn/Fe radiometric analyses. This report reviews the basis for zinc analysis for PCA, provides the supporting evidence that EDXRF Zn/Fe ratiometric analysis of EPF will provide a simple, rapid, direct, non-invasive, and highly accurate biomarker and procedure for the urology screening for prostate cancer.
    Language English
    Publishing date 2018-10-10
    Publishing country India
    Document type Journal Article
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article: Testosterone, prolactin, and oncogenic regulation of the prostate gland. A new concept: Testosterone-independent malignancy is the development of prolactin-dependent malignancy!

    Costello, Leslie C / Franklin, Renty B

    Oncology reviews

    2018  Volume 12, Issue 2, Page(s) 356

    Abstract: Hormone-independent malignancy is a major issue of morbidity and deaths that confronts prostate cancer. Despite decades of research, the oncogenic and hormonal implications in the development and progression of prostate malignancy remain mostly ... ...

    Abstract Hormone-independent malignancy is a major issue of morbidity and deaths that confronts prostate cancer. Despite decades of research, the oncogenic and hormonal implications in the development and progression of prostate malignancy remain mostly speculative. This is largely due to the absence and/or lack of consideration by contemporary clinicians and biomedical investigators regarding the established implications of the co-regulation of testosterone and prolactin in the development, maintenance, metabolism and functions of the prostate gland. Especially relevant is the major metabolic function of production of high levels of citrate by the peripheral zone acinar epithelial cells. Citrate production, along with growth and proliferation by these cells, is regulated by co-existing testosterone and prolactin signaling pathways; and by the oncogenic down-regulation of ZIP1 transporter/zinc/citrate in the development of malignancy. These relationships had not been considered in the issues of hormonedependent malignancy. This review provides the relevant background that has established the dual role of testosterone and prolactin regulation of the prostate gland; which is essential to address the implications in the oncogenic development and progression of hormone-dependent malignancy. The oncogenic factor along with testosterone-dependent and prolactin-dependent relationships leads to the plausible concept that androgen ablation for the treatment of testosteronedependent malignancy results in the development of
    Language English
    Publishing date 2018-07-04
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2390302-8
    ISSN 1970-5565 ; 1970-5565 ; 1970-5557
    ISSN (online) 1970-5565
    ISSN 1970-5565 ; 1970-5557
    DOI 10.4081/oncol.2018.356
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: A Novel Patient Case Report to Show the Successful Termination of Untreatable Androgen-independent Prostate Cancer: Treatment with Cabergoline (Dopamine agonist).

    Costello, Leslie C / Franklin, Renty B / Yu, George W

    Mathews journal of case reports

    2019  Volume 4, Issue 1

    Abstract: Introduction: Testosterone promotes the initial development of androgen-dependent prostate cancer. This is the basis for androgen ablation treatment, which attenuates, but does not terminate, the malignancy. Instead, it leads to prolactin-dependent ... ...

    Abstract Introduction: Testosterone promotes the initial development of androgen-dependent prostate cancer. This is the basis for androgen ablation treatment, which attenuates, but does not terminate, the malignancy. Instead, it leads to prolactin-dependent malignancy; in which patient death generally occurs within 5 years. This report describes the novel treatment of a patient; which terminated androgen-independent prostate cancer.
    Results: Patient "XY" was diagnosed with prostate malignancy and metastases. He received hormonal androgen ablation treatment, chemotherapy, and radiation treatment. He developed androgen-independent prostate cancer; with expected death in 2-3 years. He was treated with cabergoline (dopamine agonist) treatment, which decreased the plasma prolactin 88%; by inhibiting the pituitary production of prolactin. The subsequent PET scan (positron emission tomography) revealed the absence of malignancy; and the CTC (circulating tumor cells) decreased from count=5.4 to count=0.
    Discussion: The cause of androgen-independent malignancy has been unknown, and an effective chemotherapy did not exist. The activities of normal and malignant prostate cells are regulated primarily by testosterone. When testosterone availability diminishes; prolactin regulation is manifested. This is represented when androgen ablation results in the development of prolactin-dependent malignancy. An effective chemotherapy would be targeted to eliminate the plasma prolactin-manifestation of the androgen-independent malignancy.
    Conclusions: This report of a novel chemotherapy for androgen-independent malignancy corroborates our understanding of the implications of prolactin in its development and treatment. There are about 165,000 cases/year with 25,000 deaths/year in the U.S.; and 1.0 million cases/year with 260,000 deaths/year worldwide. Those patients with androgen-independent prostate cancer can now employ this cabergoline treatment to prevent or terminate this deadly type of prostate cancer.
    Language English
    Publishing date 2019-05-08
    Publishing country United States
    Document type Journal Article
    ISSN 2474-3666
    ISSN (online) 2474-3666
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article: Plasma Citrate Homeostasis: How It Is Regulated; And Its Physiological and Clinical Implications. An Important, But Neglected, Relationship in Medicine.

    Costello, Leslie C / Franklin, Renty B

    HSOA journal of human endocrinology

    2016  Volume 1, Issue 1

    Abstract: ... The intent of this review is to revive the interest and support for research to address the many unknown and ... interest of the medical community and the public-at-large. ...

    Abstract The homeostatic maintenance of a normal plasma citrate concentration is an important factor in humans and in animals; and is required for many normal physiological activities. Dysregulation of normal plasma citrate presents pathophysiological hypocitricemic or hypercitricemic conditions. This can lead to clinical consequences in many areas of medicine; such as impaired blood clotting, altered acid/base status, impaired neuromuscular/cardiac activities, hypocitraturia and stone formation, bone disorders with loss of bone strength and increased fractures, hypocitricemia of surgical stress. These important implications of citrate relationships have been largely ignored by the contemporary clinical and biomedical community; to the extent that it is not even described in most current textbooks and review papers. This review describes the physiological, endocrine, and metabolic relationships in the normal regulation and maintenance of plasma citrate; and presents some important clinical consequences of its dysfunctional maintenance. The importance of bone, kidney and liver activities in the maintenance of normal plasma citrate is described along with the citricemic roles of parathyroid hormone, calcitonin and vitamin D. These factors and relationships are presented as the contemporary understanding of the integrated regulation of plasma citrate as the basis for its clinical importance in medicine. The exclusion of these citrate relationships leads to misunderstanding and misrepresentation of physiological and clinical conditions in many issues in medicine and paramedicine areas. The intent of this review is to revive the interest and support for research to address the many unknown and speculative issues of plasma citrate regulation and its important clinical implications. This is in the best interest of the medical community and the public-at-large.
    Language English
    Publishing date 2016-12-31
    Publishing country United States
    Document type Journal Article
    Database MEDical Literature Analysis and Retrieval System OnLINE

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