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  1. Article ; Online: Uncovering structural themes across cilia microtubule inner proteins with implications for human cilia function.

    Andersen, Jens S / Vijayakumaran, Aaran / Godbehere, Christopher / Lorentzen, Esben / Mennella, Vito / Schou, Kenneth Bødtker

    Nature communications

    2024  Volume 15, Issue 1, Page(s) 2687

    Abstract: Centrosomes and cilia are microtubule-based superstructures vital for cell division, signaling, and motility. The once thought hollow lumen of their microtubule core structures was recently found to hold a rich meshwork of microtubule inner proteins ( ... ...

    Abstract Centrosomes and cilia are microtubule-based superstructures vital for cell division, signaling, and motility. The once thought hollow lumen of their microtubule core structures was recently found to hold a rich meshwork of microtubule inner proteins (MIPs). To address the outstanding question of how distinct MIPs evolved to recognize microtubule inner surfaces, we applied computational sequence analyses, structure predictions, and experimental validation to uncover evolutionarily conserved microtubule- and MIP-binding modules named NWE, SNYG, and ELLEn, and PYG and GFG-repeat by their signature motifs. These modules intermix with MT-binding DM10-modules and Mn-repeats in 24 Chlamydomonas and 33 human proteins. The modules molecular characteristics provided keys to identify elusive cross-species homologs, hitherto unknown human MIP candidates, and functional properties for seven protein subfamilies, including the microtubule seam-binding NWE and ELLEn families. Our work defines structural innovations that underpin centriole and axoneme assembly and demonstrates that MIPs co-evolved with centrosomes and cilia.
    MeSH term(s) Humans ; Cilia/metabolism ; Microtubule Proteins/metabolism ; Axoneme/metabolism ; Microtubules/metabolism ; Centrioles/metabolism
    Chemical Substances Microtubule Proteins
    Language English
    Publishing date 2024-03-27
    Publishing country England
    Document type Journal Article
    ZDB-ID 2553671-0
    ISSN 2041-1723 ; 2041-1723
    ISSN (online) 2041-1723
    ISSN 2041-1723
    DOI 10.1038/s41467-024-46737-3
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Analysis of cortical cell polarity by imaging flow cytometry.

    Jespersen, Jesper H / Harazin, Andras / Bohn, Anja B / Christensen, Anni / Lorentzen, Esben / Lorentzen, Anna

    Journal of cellular biochemistry

    2023  Volume 124, Issue 11, Page(s) 1685–1694

    Abstract: Metastasis is the main cause of cancer-related death and therapies specifically targeting metastasis are highly needed. Cortical cell polarity (CCP) is a prometastatic property of circulating tumor cells affecting their ability to exit blood vessels and ... ...

    Abstract Metastasis is the main cause of cancer-related death and therapies specifically targeting metastasis are highly needed. Cortical cell polarity (CCP) is a prometastatic property of circulating tumor cells affecting their ability to exit blood vessels and form new metastases that constitute a promising point of attack to prevent metastasis. However, conventional fluorescence microscopy on single cells and manual quantification of CCP are time-consuming and unsuitable for screening regulators. In this study, we developed an imaging flow cytometry-based method for high-throughput screening of factors affecting CCP in melanoma cells. The artificial intelligence-supported analysis method we developed is highly reproducible, accurate, and orders of magnitude faster than manual quantification. Additionally, this method is flexible and can be adapted to include additional cellular parameters. In a small-scale pilot experiment using polarity-, cytoskeleton-, or membrane-affecting drugs, we demonstrate that our workflow provides a straightforward and efficient approach for screening factors affecting CCP in cells in suspension and provide insights into the specific function of these drugs in this cellular system. The method and workflow presented here will facilitate large-scale studies to reveal novel cell-intrinsic as well as systemic factors controlling CCP during metastasis.
    MeSH term(s) Flow Cytometry/methods ; Artificial Intelligence ; Cell Polarity ; High-Throughput Screening Assays/methods ; Microscopy, Fluorescence/methods
    Language English
    Publishing date 2023-09-18
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 392402-6
    ISSN 1097-4644 ; 0730-2312
    ISSN (online) 1097-4644
    ISSN 0730-2312
    DOI 10.1002/jcb.30476
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article: Structural insights into the architecture and assembly of eukaryotic flagella.

    Petriman, Narcis-Adrian / Lorentzen, Esben

    Microbial cell (Graz, Austria)

    2020  Volume 7, Issue 11, Page(s) 289–299

    Abstract: Cilia and flagella are slender projections found on most eukaryotic cells including unicellular organisms such ... ...

    Abstract Cilia and flagella are slender projections found on most eukaryotic cells including unicellular organisms such as
    Language English
    Publishing date 2020-09-21
    Publishing country Austria
    Document type Journal Article ; Review
    ZDB-ID 2814756-X
    ISSN 2311-2638
    ISSN 2311-2638
    DOI 10.15698/mic2020.11.734
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  4. Article ; Online: Moving proteins along in the cilium.

    Petriman, Narcis Adrian / Lorentzen, Esben

    eLife

    2020  Volume 9

    Abstract: The structures of the bovine and human BBSome reveal that a conformational change is required to recruit the complex to the ciliary membrane. ...

    Abstract The structures of the bovine and human BBSome reveal that a conformational change is required to recruit the complex to the ciliary membrane.
    MeSH term(s) Animals ; Bardet-Biedl Syndrome/metabolism ; Cattle ; Cell Movement ; Cilia/metabolism ; Humans ; Membrane Proteins/metabolism ; Protein Transport
    Chemical Substances Membrane Proteins
    Language English
    Publishing date 2020-02-13
    Publishing country England
    Document type Journal Article ; Comment
    ZDB-ID 2687154-3
    ISSN 2050-084X ; 2050-084X
    ISSN (online) 2050-084X
    ISSN 2050-084X
    DOI 10.7554/eLife.55254
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Moving proteins along in the cilium

    Narcis Adrian Petriman / Esben Lorentzen

    eLife, Vol

    2020  Volume 9

    Abstract: The structures of the bovine and human BBSome reveal that a conformational change is required to recruit the complex to the ciliary membrane. ...

    Abstract The structures of the bovine and human BBSome reveal that a conformational change is required to recruit the complex to the ciliary membrane.
    Keywords BBSome ; cryo-em ; bos taurus ; arl6 ; cilia ; intraflagellar transport ; Medicine ; R ; Science ; Q ; Biology (General) ; QH301-705.5
    Language English
    Publishing date 2020-02-01T00:00:00Z
    Publisher eLife Sciences Publications Ltd
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  6. Article ; Online: Structural insights into the architecture and assembly of eukaryotic flagella

    Narcis-Adrian Petriman / Esben Lorentzen

    Microbial Cell, Vol 7, Iss 11, Pp 289-

    2020  Volume 299

    Abstract: Cilia and flagella are slender projections found on most eukaryotic cells including unicellular organisms such as Chlamydomonas, Trypanosoma and Tetrahymena, where they serve motility and signaling functions. The cilium is a large molecular machine ... ...

    Abstract Cilia and flagella are slender projections found on most eukaryotic cells including unicellular organisms such as Chlamydomonas, Trypanosoma and Tetrahymena, where they serve motility and signaling functions. The cilium is a large molecular machine consisting of hundreds of different proteins that are trafficked into the organelle to organize a repetitive microtubule-based axoneme. Several recent studies took advantage of improved cryo-EM methodology to unravel the high-resolution structures of ciliary complexes. These include the recently reported purification and structure determination of axonemal doublet microtubules from the green algae Chlamydomonas reinhardtii, which allows for the modeling of more than 30 associated protein factors to provide deep molecular insight into the architecture and repetitive nature of doublet microtubules. In addition, we will review several recent contributions that dissect the structure and function of ciliary trafficking complexes that ferry structural and signaling components between the cell body and the cilium organelle.
    Keywords cilia ; intraflagellar transport (ift) ; microtubule doublet ; bbsome ; Biology (General) ; QH301-705.5
    Language English
    Publishing date 2020-09-01T00:00:00Z
    Publisher Shared Science Publishers OG
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  7. Article ; Online: Purine nucleosides replace cAMP in allosteric regulation of PKA in trypanosomatid pathogens.

    Ober, Veronica Teresa / Githure, George Boniface / Volpato Santos, Yuri / Becker, Sidney / Moya Munoz, Gabriel / Basquin, Jérôme / Schwede, Frank / Lorentzen, Esben / Boshart, Michael

    eLife

    2024  Volume 12

    Abstract: Cyclic nucleotide binding domains (CNB) confer allosteric regulation by cAMP or cGMP to many signaling proteins, including PKA and PKG. PKA of phylogenetically ... ...

    Abstract Cyclic nucleotide binding domains (CNB) confer allosteric regulation by cAMP or cGMP to many signaling proteins, including PKA and PKG. PKA of phylogenetically distant
    MeSH term(s) Purine Nucleosides ; Cyclic AMP/metabolism ; Nucleosides/pharmacology ; Allosteric Regulation ; Nucleotides, Cyclic ; Guanosine ; Adenosine
    Chemical Substances Purine Nucleosides ; Cyclic AMP (E0399OZS9N) ; Nucleosides ; Nucleotides, Cyclic ; Guanosine (12133JR80S) ; Adenosine (K72T3FS567)
    Language English
    Publishing date 2024-03-22
    Publishing country England
    Document type Journal Article
    ZDB-ID 2687154-3
    ISSN 2050-084X ; 2050-084X
    ISSN (online) 2050-084X
    ISSN 2050-084X
    DOI 10.7554/eLife.91040
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Structure of the ciliogenesis-associated CPLANE complex.

    Langousis, Gerasimos / Cavadini, Simone / Boegholm, Niels / Lorentzen, Esben / Kempf, Georg / Matthias, Patrick

    Science advances

    2022  Volume 8, Issue 15, Page(s) eabn0832

    Abstract: Dysfunctional cilia cause pleiotropic human diseases termed ciliopathies. These hereditary maladies are often caused by defects in cilia assembly, a complex event that is regulated by the ciliogenesis and planar polarity effector (CPLANE) proteins Wdpcp, ...

    Abstract Dysfunctional cilia cause pleiotropic human diseases termed ciliopathies. These hereditary maladies are often caused by defects in cilia assembly, a complex event that is regulated by the ciliogenesis and planar polarity effector (CPLANE) proteins Wdpcp, Inturned, and Fuzzy. CPLANE proteins are essential for building the cilium and are mutated in multiple ciliopathies, yet their structure and molecular functions remain elusive. Here, we show that mammalian CPLANE proteins comprise a bona fide complex and report the near-atomic resolution structures of the human Wdpcp-Inturned-Fuzzy complex and of the mouse Wdpcp-Inturned-Fuzzy complex bound to the small guanosine triphosphatase Rsg1. Notably, the crescent-shaped CPLANE complex binds phospholipids such as phosphatidylinositol 3-phosphate via multiple modules and a CPLANE ciliopathy mutant exhibits aberrant lipid binding. Our study provides critical structural and functional insights into an enigmatic ciliogenesis-associated complex as well as unexpected molecular rationales for ciliopathies.
    Language English
    Publishing date 2022-04-15
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2810933-8
    ISSN 2375-2548 ; 2375-2548
    ISSN (online) 2375-2548
    ISSN 2375-2548
    DOI 10.1126/sciadv.abn0832
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: The ins and outs of the Arf4-based ciliary membrane-targeting complex.

    Deretic, Dusanka / Lorentzen, Esben / Fresquez, Theresa

    Small GTPases

    2019  Volume 12, Issue 1, Page(s) 1–12

    Abstract: The small GTPase Arf4-based ciliary membrane-targeting complex recognizes specific targeting signals within sensory receptors and regulates their directed movement to primary cilia. Activated Arf4 directly binds the VxPx ciliary-targeting signal (CTS) of ...

    Abstract The small GTPase Arf4-based ciliary membrane-targeting complex recognizes specific targeting signals within sensory receptors and regulates their directed movement to primary cilia. Activated Arf4 directly binds the VxPx ciliary-targeting signal (CTS) of the light-sensing receptor rhodopsin. Recent findings revealed that at the
    MeSH term(s) Cilia
    Language English
    Publishing date 2019-05-17
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 2682247-7
    ISSN 2154-1256 ; 2154-1248
    ISSN (online) 2154-1256
    ISSN 2154-1248
    DOI 10.1080/21541248.2019.1616355
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  10. Article ; Online: The Intraflagellar Transport Machinery.

    Taschner, Michael / Lorentzen, Esben

    Cold Spring Harbor perspectives in biology

    2016  Volume 8, Issue 10

    Abstract: Eukaryotic cilia and flagella are evolutionarily conserved organelles that protrude from the cell surface. The unique location and properties of cilia allow them to function in vital processes such as motility and signaling. Ciliary assembly and ... ...

    Abstract Eukaryotic cilia and flagella are evolutionarily conserved organelles that protrude from the cell surface. The unique location and properties of cilia allow them to function in vital processes such as motility and signaling. Ciliary assembly and maintenance rely on intraflagellar transport (IFT), the bidirectional movement of a multicomponent transport system between the ciliary base and tip. Since its initial discovery more than two decades ago, considerable effort has been invested in dissecting the molecular mechanisms of IFT in a variety of model organisms. Importantly, IFT was shown to be essential for mammalian development, and defects in this process cause a number of human pathologies known as ciliopathies. Here, we review current knowledge of IFT with a particular emphasis on the IFT machinery and specific mechanisms of ciliary cargo recognition and transport.
    MeSH term(s) Animals ; Biological Transport ; Cilia/metabolism ; Flagella/metabolism ; Humans ; Protein Binding ; Protein Stability ; Proteins/chemistry ; Proteins/metabolism
    Chemical Substances Proteins
    Language English
    Publishing date 2016-10-03
    Publishing country United States
    Document type Journal Article ; Review
    ISSN 1943-0264
    ISSN (online) 1943-0264
    DOI 10.1101/cshperspect.a028092
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