Article ; Online: A mean first passage time genome rearrangement distance.
Journal of mathematical biology
2020 Volume 80, Issue 6, Page(s) 1971–1992
Abstract: This paper introduces a new way to define a genome rearrangement distance, using the concept of mean first passage time from probability theory. Crucially, this distance provides a genuine metric on genome space. We develop the theory and introduce a ... ...
Abstract | This paper introduces a new way to define a genome rearrangement distance, using the concept of mean first passage time from probability theory. Crucially, this distance provides a genuine metric on genome space. We develop the theory and introduce a link to a graph-based zeta function. The approach is very general and can be applied to a wide variety of group-theoretic models of genome evolution. |
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MeSH term(s) | Bacteria/genetics ; Chromosome Inversion ; Evolution, Molecular ; Gene Rearrangement ; Genome ; Genome, Bacterial ; Likelihood Functions ; Markov Chains ; Mathematical Concepts ; Models, Genetic ; Phylogeny ; Probability Theory ; Time Factors |
Language | English |
Publishing date | 2020-04-06 |
Publishing country | Germany |
Document type | Journal Article ; Research Support, Non-U.S. Gov't |
ZDB-ID | 187101-8 |
ISSN | 1432-1416 ; 0303-6812 |
ISSN (online) | 1432-1416 |
ISSN | 0303-6812 |
DOI | 10.1007/s00285-020-01487-w |
Database | MEDical Literature Analysis and Retrieval System OnLINE |
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